RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 ZNF804AQ7Z570 1209 aa19.21■□□□□ 0.67
SMPD4-202ENST00000409031 SUGP1Q8IWZ8 645 aaKnown RBP19.21■□□□□ 0.67
SMPD4-202ENST00000409031 DTNBP1Q96EV8 351 aa19.21■□□□□ 0.67
SMPD4-202ENST00000409031 LRRC1Q9BTT6 524 aa19.21■□□□□ 0.67
SMPD4-202ENST00000409031 OSBPL1AQ9BXW6 950 aa19.21■□□□□ 0.67
SMPD4-202ENST00000409031 GPCPD1Q9NPB8 672 aa19.21■□□□□ 0.67
SMPD4-202ENST00000409031 ESRRAP11474 423 aaPredicted RBP19.21■□□□□ 0.67
SMPD4-202ENST00000409031 AFAP1L2Q8N4X5 818 aa19.21■□□□□ 0.67
SMPD4-202ENST00000409031 FAM133AQ8N9E0 248 aa19.21■□□□□ 0.67
SMPD4-202ENST00000409031 VTI1AQ96AJ9 217 aa19.21■□□□□ 0.67
SMPD4-202ENST00000409031 IL17RAQ96F46 866 aa19.21■□□□□ 0.67
SMPD4-202ENST00000409031 PCDHA12Q9UN75 941 aa19.21■□□□□ 0.67
SMPD4-202ENST00000409031 DIS3Q9Y2L1 958 aaKnown RBP19.21■□□□□ 0.67
SMPD4-202ENST00000409031 H0Y3Z8 333 aa19.21■□□□□ 0.67
SMPD4-202ENST00000409031 RANBP1P43487 201 aa19.21■□□□□ 0.67
SMPD4-202ENST00000409031 LRRC63Q05C16 580 aa19.21■□□□□ 0.67
SMPD4-202ENST00000409031 WDR93Q6P2C0 686 aa19.21■□□□□ 0.67
SMPD4-202ENST00000409031 OGFOD1Q8N543 542 aa19.21■□□□□ 0.67
SMPD4-202ENST00000409031 STK17AQ9UEE5 414 aa19.21■□□□□ 0.67
SMPD4-202ENST00000409031 USP17L12C9JPN9 530 aa19.2■□□□□ 0.66
SMPD4-202ENST00000409031 USP17L21D6R901 530 aa19.2■□□□□ 0.66
SMPD4-202ENST00000409031 TMTC3Q6ZXV5 915 aa19.2■□□□□ 0.66
SMPD4-202ENST00000409031 GDAP1Q8TB36 358 aa19.2■□□□□ 0.66
SMPD4-202ENST00000409031 GPHNQ9NQX3 736 aaPredicted RBP19.2■□□□□ 0.66
SMPD4-202ENST00000409031 MYO1FO00160 1098 aa19.2■□□□□ 0.66
SMPD4-202ENST00000409031 RNF8O76064 485 aa19.2■□□□□ 0.66
SMPD4-202ENST00000409031 FAM107AO95990 144 aa19.2■□□□□ 0.66
SMPD4-202ENST00000409031 MSH2P43246 934 aa19.2■□□□□ 0.66
SMPD4-202ENST00000409031 ALKBH5Q6P6C2 394 aaKnown RBP19.2■□□□□ 0.66
SMPD4-202ENST00000409031 SMCR8Q8TEV9 937 aaPredicted RBP19.2■□□□□ 0.66
SMPD4-202ENST00000409031 ETNK1Q9HBU6 452 aa19.2■□□□□ 0.66
SMPD4-202ENST00000409031 SLC40A1Q9NP59 571 aa19.2■□□□□ 0.66
SMPD4-202ENST00000409031 ENO4A6NNW6 628 aa19.2■□□□□ 0.66
SMPD4-202ENST00000409031 STXBP3O00186 592 aa19.2■□□□□ 0.66
SMPD4-202ENST00000409031 AP5Z1O43299 807 aa19.2■□□□□ 0.66
SMPD4-202ENST00000409031 TMED1Q13445 227 aa19.2■□□□□ 0.66
SMPD4-202ENST00000409031 SH2D3CQ8N5H7 860 aa19.2■□□□□ 0.66
SMPD4-202ENST00000409031 HOOK2Q96ED9 719 aa19.2■□□□□ 0.66
SMPD4-202ENST00000409031 FGFR1OP2Q9NVK5 253 aa19.2■□□□□ 0.66
SMPD4-202ENST00000409031 GDAQ9Y2T3 454 aa19.2■□□□□ 0.66
SMPD4-202ENST00000409031 TRPM1Q7Z4N2 1603 aa19.2■□□□□ 0.66
SMPD4-202ENST00000409031 MESDQ14696 234 aa19.2■□□□□ 0.66
SMPD4-202ENST00000409031 NBPF5PQ86XG9 351 aaPredicted RBP19.2■□□□□ 0.66
SMPD4-202ENST00000409031 SUGCTQ9HAC7 445 aa19.2■□□□□ 0.66
SMPD4-202ENST00000409031 ATP8A2Q9NTI2 1148 aa19.2■□□□□ 0.66
SMPD4-202ENST00000409031 ARPP21Q9UBL0 812 aaPredicted RBP19.2■□□□□ 0.66
SMPD4-202ENST00000409031 PLA2R1Q13018 1463 aa19.2■□□□□ 0.66
SMPD4-202ENST00000409031 ESRRGP62508 458 aa19.19■□□□□ 0.66
SMPD4-202ENST00000409031 PDCD2Q16342 344 aaPredicted RBP19.19■□□□□ 0.66
SMPD4-202ENST00000409031 FAM47AQ5JRC9 791 aa19.19■□□□□ 0.66
SMPD4-202ENST00000409031 MLXIPQ9HAP2 919 aa19.19■□□□□ 0.66
SMPD4-202ENST00000409031 RFX7Q2KHR2 1363 aa19.19■□□□□ 0.66
SMPD4-202ENST00000409031 ITIH6Q6UXX5 1313 aa19.19■□□□□ 0.66
SMPD4-202ENST00000409031 WDR19Q8NEZ3 1342 aa19.19■□□□□ 0.66
SMPD4-202ENST00000409031 STK36Q9NRP7 1315 aa19.19■□□□□ 0.66
SMPD4-202ENST00000409031 SLC8A3P57103 927 aa19.19■□□□□ 0.66
SMPD4-202ENST00000409031 PICALMQ13492 652 aa19.19■□□□□ 0.66
SMPD4-202ENST00000409031 NOA1Q8NC60 698 aaKnown RBP19.19■□□□□ 0.66
SMPD4-202ENST00000409031 ECT2Q9H8V3 914 aa19.19■□□□□ 0.66
SMPD4-202ENST00000409031 CAPN12Q6ZSI9 719 aa19.19■□□□□ 0.66
SMPD4-202ENST00000409031 PNMA1Q8ND90 353 aa19.19■□□□□ 0.66
SMPD4-202ENST00000409031 KCNV2Q8TDN2 545 aa19.19■□□□□ 0.66
SMPD4-202ENST00000409031 NLRP7Q8WX94 980 aa19.19■□□□□ 0.66
SMPD4-202ENST00000409031 ANAPC5Q9UJX4 755 aa19.19■□□□□ 0.66
SMPD4-202ENST00000409031 RAD23BP54727 409 aa19.19■□□□□ 0.66
SMPD4-202ENST00000409031 NR1I3Q14994 352 aa19.19■□□□□ 0.66
SMPD4-202ENST00000409031 RAD9BQ6WBX8 426 aa19.19■□□□□ 0.66
SMPD4-202ENST00000409031 METTL16Q86W50 562 aaKnown RBP19.19■□□□□ 0.66
SMPD4-202ENST00000409031 SIRT1Q96EB6 747 aa19.19■□□□□ 0.66
SMPD4-202ENST00000409031 RAB20Q9NX57 234 aa19.19■□□□□ 0.66
SMPD4-202ENST00000409031 BIN2Q9UBW5 565 aaPredicted RBP19.19■□□□□ 0.66
SMPD4-202ENST00000409031 ZNF148Q9UQR1 794 aa19.19■□□□□ 0.66
SMPD4-202ENST00000409031 CDK12Q9NYV4 1490 aaPredicted RBP19.18■□□□□ 0.66
SMPD4-202ENST00000409031 DIAPH2O60879 1101 aa19.18■□□□□ 0.66
SMPD4-202ENST00000409031 A1BGP04217 495 aa19.18■□□□□ 0.66
SMPD4-202ENST00000409031 ADCY1Q08828 1119 aa19.18■□□□□ 0.66
SMPD4-202ENST00000409031 RCN2Q14257 317 aa19.18■□□□□ 0.66
SMPD4-202ENST00000409031 TMED2Q15363 201 aa19.18■□□□□ 0.66
SMPD4-202ENST00000409031 FGD4Q96M96 766 aa19.18■□□□□ 0.66
SMPD4-202ENST00000409031 CAPN11Q9UMQ6 739 aa19.18■□□□□ 0.66
SMPD4-202ENST00000409031 PRPF3O43395 683 aaKnown RBP19.18■□□□□ 0.66
SMPD4-202ENST00000409031 FGGP02679 453 aa19.18■□□□□ 0.66
SMPD4-202ENST00000409031 AFPP02771 609 aaKnown RBP19.18■□□□□ 0.66
SMPD4-202ENST00000409031 NR2F2P24468 414 aa19.18■□□□□ 0.66
SMPD4-202ENST00000409031 PTPN12Q05209 780 aaKnown RBP19.18■□□□□ 0.66
SMPD4-202ENST00000409031 LRIG3Q6UXM1 1119 aa19.18■□□□□ 0.66
SMPD4-202ENST00000409031 RSAD2Q8WXG1 361 aa19.18■□□□□ 0.66
SMPD4-202ENST00000409031 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.18■□□□□ 0.66
SMPD4-202ENST00000409031 PSMD2Q13200 908 aa19.18■□□□□ 0.66
SMPD4-202ENST00000409031 SGO2Q562F6 1265 aa19.18■□□□□ 0.66
SMPD4-202ENST00000409031 IGSF1Q8N6C5 1336 aa19.18■□□□□ 0.66
SMPD4-202ENST00000409031 ARHGAP4P98171 946 aa19.18■□□□□ 0.66
SMPD4-202ENST00000409031 TCIRG1Q13488 830 aa19.18■□□□□ 0.66
SMPD4-202ENST00000409031 DISC1Q9NRI5 854 aa19.18■□□□□ 0.66
SMPD4-202ENST00000409031 PCDHA4Q9UN74 947 aa19.18■□□□□ 0.66
SMPD4-202ENST00000409031 ATP7BP35670 1465 aa19.18■□□□□ 0.66
SMPD4-202ENST00000409031 PSMD14O00487 310 aa19.17■□□□□ 0.66
SMPD4-202ENST00000409031 CCND1P24385 295 aa19.17■□□□□ 0.66
SMPD4-202ENST00000409031 RWDD2BP57060 319 aa19.17■□□□□ 0.66
SMPD4-202ENST00000409031 SEMA3FQ13275 785 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms