RNA–Protein interactions for RNA: ENST00000407418.7

CBX6-202, Transcript of chromobox 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CBX6, Length 6,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-202ENST00000407418 VPS37BQ9H9H4 285 aa18■□□□□ 0.47
CBX6-202ENST00000407418 PRDM5Q9NQX1 630 aaPredicted RBP18■□□□□ 0.47
CBX6-202ENST00000407418 KBTBD13C9JR72 458 aa18■□□□□ 0.47
CBX6-202ENST00000407418 TBC1D8O95759 1140 aa18■□□□□ 0.47
CBX6-202ENST00000407418 EIF2AK2P19525 551 aaKnown RBP18■□□□□ 0.47
CBX6-202ENST00000407418 MBD5Q9P267 1494 aa18■□□□□ 0.47
CBX6-202ENST00000407418 CDK12Q9NYV4 1490 aaPredicted RBP17.99■□□□□ 0.47
CBX6-202ENST00000407418 GOLGA8FQ08AF8 430 aa17.99■□□□□ 0.47
CBX6-202ENST00000407418 GOLGA8DPQ0D2H9 430 aa17.99■□□□□ 0.47
CBX6-202ENST00000407418 HHATQ5VTY9 493 aa17.99■□□□□ 0.47
CBX6-202ENST00000407418 SP8Q8IXZ3 490 aa17.99■□□□□ 0.47
CBX6-202ENST00000407418 RBSNQ9H1K0 784 aa17.99■□□□□ 0.47
CBX6-202ENST00000407418 RASSF4Q9H2L5 321 aa17.99■□□□□ 0.47
CBX6-202ENST00000407418 PIDD1Q9HB75 910 aa17.99■□□□□ 0.47
CBX6-202ENST00000407418 ADD1P35611 737 aaKnown RBP17.99■□□□□ 0.47
CBX6-202ENST00000407418 TFAMQ00059 246 aaKnown RBP17.99■□□□□ 0.47
CBX6-202ENST00000407418 LARP4BQ92615 738 aaKnown RBP17.99■□□□□ 0.47
CBX6-202ENST00000407418 ZFYVE28Q9HCC9 887 aa17.99■□□□□ 0.47
CBX6-202ENST00000407418 IMPACTQ9P2X3 320 aa17.99■□□□□ 0.47
CBX6-202ENST00000407418 PRAMEF22A3QJZ6 481 aa17.99■□□□□ 0.47
CBX6-202ENST00000407418 SEPT6Q14141 434 aa17.99■□□□□ 0.47
CBX6-202ENST00000407418 DNAJC21Q5F1R6 531 aaKnown RBP17.99■□□□□ 0.47
CBX6-202ENST00000407418 FAM76AQ8TAV0 307 aa17.99■□□□□ 0.47
CBX6-202ENST00000407418 DYNLL2Q96FJ2 89 aa17.99■□□□□ 0.47
CBX6-202ENST00000407418 KRT12Q99456 494 aa17.99■□□□□ 0.47
CBX6-202ENST00000407418 DBNLQ9UJU6 430 aaKnown RBP17.99■□□□□ 0.47
CBX6-202ENST00000407418 TNFAIP2Q03169 654 aa17.99■□□□□ 0.47
CBX6-202ENST00000407418 ALCAMQ13740 583 aa17.99■□□□□ 0.47
CBX6-202ENST00000407418 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.99■□□□□ 0.47
CBX6-202ENST00000407418 TDRD3Q9H7E2 651 aaKnown RBP17.99■□□□□ 0.47
CBX6-202ENST00000407418 PTH1RQ03431 593 aa17.98■□□□□ 0.47
CBX6-202ENST00000407418 TSTA3Q13630 321 aaPredicted RBP17.98■□□□□ 0.47
CBX6-202ENST00000407418 ME3Q16798 604 aa17.98■□□□□ 0.47
CBX6-202ENST00000407418 PRR36Q9H6K5 1346 aa17.98■□□□□ 0.47
CBX6-202ENST00000407418 TNPO2O14787 897 aaKnown RBP17.98■□□□□ 0.47
CBX6-202ENST00000407418 CFAP221Q4G0U5 840 aa17.98■□□□□ 0.47
CBX6-202ENST00000407418 SNRNP48Q6IEG0 339 aaKnown RBP17.98■□□□□ 0.47
CBX6-202ENST00000407418 TRIM31Q9BZY9 425 aa17.98■□□□□ 0.47
CBX6-202ENST00000407418 SLC39A2Q9NP94 309 aa17.98■□□□□ 0.47
CBX6-202ENST00000407418 ABCB4P21439 1286 aa17.98■□□□□ 0.47
CBX6-202ENST00000407418 ZNF157P51786 506 aaPredicted RBP17.98■□□□□ 0.47
CBX6-202ENST00000407418 HDXQ7Z353 690 aa17.98■□□□□ 0.47
CBX6-202ENST00000407418 NDUFAF2Q8N183 169 aa17.98■□□□□ 0.47
CBX6-202ENST00000407418 BRIP1Q9BX63 1249 aa17.98■□□□□ 0.47
CBX6-202ENST00000407418 IFIH1Q9BYX4 1025 aaKnown RBP17.98■□□□□ 0.47
CBX6-202ENST00000407418 RAB17Q9H0T7 212 aa17.98■□□□□ 0.47
CBX6-202ENST00000407418 NFX1Q12986 1120 aaKnown RBP17.98■□□□□ 0.47
CBX6-202ENST00000407418 PTGDRQ13258 359 aa17.98■□□□□ 0.47
CBX6-202ENST00000407418 HS1BP3Q53T59 392 aa17.98■□□□□ 0.47
CBX6-202ENST00000407418 FAM83BQ5T0W9 1011 aa17.98■□□□□ 0.47
CBX6-202ENST00000407418 CCDC51Q96ER9 411 aa17.98■□□□□ 0.47
CBX6-202ENST00000407418 PLCB1Q9NQ66 1216 aa17.98■□□□□ 0.47
CBX6-202ENST00000407418 PFKFB1P16118 471 aa17.97■□□□□ 0.47
CBX6-202ENST00000407418 PPP2R3AQ06190 1150 aa17.97■□□□□ 0.47
CBX6-202ENST00000407418 GJA10Q969M2 543 aa17.97■□□□□ 0.47
CBX6-202ENST00000407418 RNF219Q5W0B1 726 aaPredicted RBP17.97■□□□□ 0.47
CBX6-202ENST00000407418 SMAP1Q8IYB5 467 aaPredicted RBP17.97■□□□□ 0.47
CBX6-202ENST00000407418 TBCKQ8TEA7 893 aa17.97■□□□□ 0.47
CBX6-202ENST00000407418 FAM149B1Q96BN6 582 aa17.97■□□□□ 0.47
CBX6-202ENST00000407418 FOXP1Q9H334 677 aaPredicted RBP17.97■□□□□ 0.47
CBX6-202ENST00000407418 TET3O43151 1660 aa17.97■□□□□ 0.47
CBX6-202ENST00000407418 BFSP1Q12934 665 aa17.97■□□□□ 0.47
CBX6-202ENST00000407418 NLRP4Q96MN2 994 aa17.97■□□□□ 0.47
CBX6-202ENST00000407418 EIF3CLB5ME19 914 aaKnown RBP17.97■□□□□ 0.47
CBX6-202ENST00000407418 CLGNO14967 610 aa17.97■□□□□ 0.47
CBX6-202ENST00000407418 GARSP41250 739 aaKnown RBP17.97■□□□□ 0.47
CBX6-202ENST00000407418 SLFN12LQ6IEE8 588 aa17.97■□□□□ 0.47
CBX6-202ENST00000407418 TRIML1Q8N9V2 468 aa17.97■□□□□ 0.47
CBX6-202ENST00000407418 SH3RF3Q8TEJ3 882 aaPredicted RBP17.97■□□□□ 0.47
CBX6-202ENST00000407418 EIF3CQ99613 913 aaKnown RBP17.97■□□□□ 0.47
CBX6-202ENST00000407418 STK17AQ9UEE5 414 aa17.97■□□□□ 0.47
CBX6-202ENST00000407418 SRGAP2CP0DJJ0 459 aa17.97■□□□□ 0.47
CBX6-202ENST00000407418 EFCAB13Q8IY85 973 aa17.97■□□□□ 0.47
CBX6-202ENST00000407418 SYMPKQ92797 1274 aaKnown RBP17.97■□□□□ 0.47
CBX6-202ENST00000407418 ABCB11O95342 1321 aa17.97■□□□□ 0.47
CBX6-202ENST00000407418 IGSF3O75054 1194 aa17.96■□□□□ 0.47
CBX6-202ENST00000407418 TTLL11Q8NHH1 800 aa17.96■□□□□ 0.47
CBX6-202ENST00000407418 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.96■□□□□ 0.47
CBX6-202ENST00000407418 RFX6Q8HWS3 928 aa17.96■□□□□ 0.47
CBX6-202ENST00000407418 EPSTI1Q96J88 318 aa17.96■□□□□ 0.47
CBX6-202ENST00000407418 FAM8A1Q9UBU6 413 aa17.96■□□□□ 0.47
CBX6-202ENST00000407418 ASB14A6NK59 587 aa17.96■□□□□ 0.47
CBX6-202ENST00000407418 KLHL7Q8IXQ5 586 aa17.96■□□□□ 0.47
CBX6-202ENST00000407418 NCAPGQ9BPX3 1015 aa17.96■□□□□ 0.47
CBX6-202ENST00000407418 CD209Q9NNX6 404 aa17.96■□□□□ 0.47
CBX6-202ENST00000407418 ABCC12Q96J65 1359 aa17.96■□□□□ 0.47
CBX6-202ENST00000407418 PHKA2P46019 1235 aa17.96■□□□□ 0.47
CBX6-202ENST00000407418 SREBF2Q12772 1141 aa17.96■□□□□ 0.47
CBX6-202ENST00000407418 AP3B2Q13367 1082 aa17.96■□□□□ 0.47
CBX6-202ENST00000407418 MTMR3Q13615 1198 aa17.96■□□□□ 0.47
CBX6-202ENST00000407418 NAA25Q14CX7 972 aa17.96■□□□□ 0.47
CBX6-202ENST00000407418 TRMT44Q8IYL2 757 aaKnown RBP17.96■□□□□ 0.47
CBX6-202ENST00000407418 ZSWIM6Q9HCJ5 1215 aa17.96■□□□□ 0.47
CBX6-202ENST00000407418 KCNJ6P48051 423 aa17.96■□□□□ 0.47
CBX6-202ENST00000407418 SATB1Q01826 763 aa17.96■□□□□ 0.47
CBX6-202ENST00000407418 RAVER2Q9HCJ3 691 aaKnown RBP17.96■□□□□ 0.47
CBX6-202ENST00000407418 NEDD9Q14511 834 aa17.95■□□□□ 0.46
CBX6-202ENST00000407418 PGBD1Q96JS3 809 aa17.95■□□□□ 0.46
CBX6-202ENST00000407418 RAB3IPQ96QF0 476 aaPredicted RBP17.95■□□□□ 0.46
CBX6-202ENST00000407418 EXOC3L4Q17RC7 722 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms