RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 ACER1Q8TDN7 264 aa14.6□□□□□ -0.07
SMARCB1-203ENST00000407082 ZNF830Q96NB3 372 aaPredicted RBP14.6□□□□□ -0.07
SMARCB1-203ENST00000407082 ARHGEF10LQ9HCE6 1279 aa14.6□□□□□ -0.07
SMARCB1-203ENST00000407082 PRDM5Q9NQX1 630 aaPredicted RBP14.6□□□□□ -0.07
SMARCB1-203ENST00000407082 IL17RBQ9NRM6 502 aa14.6□□□□□ -0.07
SMARCB1-203ENST00000407082 KCNJ14Q9UNX9 436 aa14.6□□□□□ -0.07
SMARCB1-203ENST00000407082 TTC28Q96AY4 2481 aa14.6□□□□□ -0.07
SMARCB1-203ENST00000407082 PLIN4Q96Q06 1357 aa14.6□□□□□ -0.07
SMARCB1-203ENST00000407082 KIF2AO00139 706 aaPredicted RBP14.59□□□□□ -0.07
SMARCB1-203ENST00000407082 CCP110O43303 1012 aa14.59□□□□□ -0.07
SMARCB1-203ENST00000407082 TTLL1O95922 423 aa14.59□□□□□ -0.07
SMARCB1-203ENST00000407082 BACE1P56817 501 aa14.59□□□□□ -0.07
SMARCB1-203ENST00000407082 HERVK_113P62684 666 aa14.59□□□□□ -0.07
SMARCB1-203ENST00000407082 Q3C1V9 767 aa14.59□□□□□ -0.07
SMARCB1-203ENST00000407082 PPP4R3BQ5MIZ7 849 aa14.59□□□□□ -0.07
SMARCB1-203ENST00000407082 C9orf50Q5SZB4 431 aa14.59□□□□□ -0.07
SMARCB1-203ENST00000407082 PLEKHH3Q7Z736 793 aa14.59□□□□□ -0.07
SMARCB1-203ENST00000407082 MLKLQ8NB16 471 aa14.59□□□□□ -0.07
SMARCB1-203ENST00000407082 CCDC148Q8NFR7 591 aa14.59□□□□□ -0.07
SMARCB1-203ENST00000407082 FEZ1Q99689 392 aa14.59□□□□□ -0.07
SMARCB1-203ENST00000407082 PORCNQ9H237 461 aa14.59□□□□□ -0.07
SMARCB1-203ENST00000407082 NYAP2Q9P242 653 aa14.59□□□□□ -0.07
SMARCB1-203ENST00000407082 RAPGEFL1Q9UHV5 662 aa14.59□□□□□ -0.07
SMARCB1-203ENST00000407082 FBXO2Q9UK22 296 aaPredicted RBP14.59□□□□□ -0.07
SMARCB1-203ENST00000407082 STX8Q9UNK0 236 aa14.59□□□□□ -0.07
SMARCB1-203ENST00000407082 V9GY48 417 aaPredicted RBP14.59□□□□□ -0.07
SMARCB1-203ENST00000407082 PLXNB2O15031 1838 aa14.58□□□□□ -0.08
SMARCB1-203ENST00000407082 A0A1W2PRG0 241 aa14.58□□□□□ -0.08
SMARCB1-203ENST00000407082 C19orf81C9J6K1 198 aa14.58□□□□□ -0.08
SMARCB1-203ENST00000407082 SCG2P13521 617 aa14.58□□□□□ -0.08
SMARCB1-203ENST00000407082 RTP1P59025 263 aa14.58□□□□□ -0.08
SMARCB1-203ENST00000407082 NLRP5P59047 1200 aa14.58□□□□□ -0.08
SMARCB1-203ENST00000407082 MYL5Q02045 173 aa14.58□□□□□ -0.08
SMARCB1-203ENST00000407082 FUT2Q10981 343 aa14.58□□□□□ -0.08
SMARCB1-203ENST00000407082 ZYXQ15942 572 aaKnown RBP14.58□□□□□ -0.08
SMARCB1-203ENST00000407082 SH3D19Q5HYK7 790 aa14.58□□□□□ -0.08
SMARCB1-203ENST00000407082 MFSD14CQ5VZR4 134 aa14.58□□□□□ -0.08
SMARCB1-203ENST00000407082 GPR142Q7Z601 462 aa14.58□□□□□ -0.08
SMARCB1-203ENST00000407082 CCDC82Q8N4S0 544 aa14.58□□□□□ -0.08
SMARCB1-203ENST00000407082 CCDC12Q8WUD4 166 aaPredicted RBP14.58□□□□□ -0.08
SMARCB1-203ENST00000407082 SMARCE1Q969G3 411 aa14.58□□□□□ -0.08
SMARCB1-203ENST00000407082 SH2D4AQ9H788 454 aa14.58□□□□□ -0.08
SMARCB1-203ENST00000407082 RBPJLQ9UBG7 517 aa14.58□□□□□ -0.08
SMARCB1-203ENST00000407082 SMARCA1P28370 1054 aa14.57□□□□□ -0.08
SMARCB1-203ENST00000407082 TOB1P50616 345 aaPredicted RBP14.57□□□□□ -0.08
SMARCB1-203ENST00000407082 USP14P54578 494 aa14.57□□□□□ -0.08
SMARCB1-203ENST00000407082 ERVK-9P63128 1117 aa14.57□□□□□ -0.08
SMARCB1-203ENST00000407082 ERVK-24P63145 666 aa14.57□□□□□ -0.08
SMARCB1-203ENST00000407082 POSTNQ15063 836 aa14.57□□□□□ -0.08
SMARCB1-203ENST00000407082 PKN1Q16512 942 aa14.57□□□□□ -0.08
SMARCB1-203ENST00000407082 PFKFB3Q16875 520 aaPredicted RBP14.57□□□□□ -0.08
SMARCB1-203ENST00000407082 LRRC8AQ8IWT6 810 aa14.57□□□□□ -0.08
SMARCB1-203ENST00000407082 MYRIPQ8NFW9 859 aa14.57□□□□□ -0.08
SMARCB1-203ENST00000407082 MKL1Q969V6 931 aa14.57□□□□□ -0.08
SMARCB1-203ENST00000407082 APBA2Q99767 749 aa14.57□□□□□ -0.08
SMARCB1-203ENST00000407082 KIAA1683Q9H0B3 1180 aa14.57□□□□□ -0.08
SMARCB1-203ENST00000407082 TTYH1Q9H313 450 aaPredicted RBP14.57□□□□□ -0.08
SMARCB1-203ENST00000407082 KCNF1Q9H3M0 494 aa14.57□□□□□ -0.08
SMARCB1-203ENST00000407082 TMX2Q9Y320 296 aa14.57□□□□□ -0.08
SMARCB1-203ENST00000407082 GREB1LQ9C091 1923 aaPredicted RBP14.56□□□□□ -0.08
SMARCB1-203ENST00000407082 UQCRHLA0A096LP55 91 aa14.56□□□□□ -0.08
SMARCB1-203ENST00000407082 TNFRSF10AO00220 468 aa14.56□□□□□ -0.08
SMARCB1-203ENST00000407082 RAD21O60216 631 aa14.56□□□□□ -0.08
SMARCB1-203ENST00000407082 UQCRHP07919 91 aa14.56□□□□□ -0.08
SMARCB1-203ENST00000407082 TXLNAP40222 546 aa14.56□□□□□ -0.08
SMARCB1-203ENST00000407082 SEMA3FQ13275 785 aa14.56□□□□□ -0.08
SMARCB1-203ENST00000407082 DPCR1Q3MIW9 517 aa14.56□□□□□ -0.08
SMARCB1-203ENST00000407082 TTC38Q5R3I4 469 aa14.56□□□□□ -0.08
SMARCB1-203ENST00000407082 MORN1Q5T089 497 aa14.56□□□□□ -0.08
SMARCB1-203ENST00000407082 GJC2Q5T442 439 aaPredicted RBP14.56□□□□□ -0.08
SMARCB1-203ENST00000407082 NT5DC1Q5TFE4 455 aa14.56□□□□□ -0.08
SMARCB1-203ENST00000407082 USP17L2Q6R6M4 530 aa14.56□□□□□ -0.08
SMARCB1-203ENST00000407082 USP6NLQ92738 828 aa14.56□□□□□ -0.08
SMARCB1-203ENST00000407082 BADQ92934 168 aa14.56□□□□□ -0.08
SMARCB1-203ENST00000407082 CLIC6Q96NY7 704 aa14.56□□□□□ -0.08
SMARCB1-203ENST00000407082 GOPCQ9HD26 462 aa14.56□□□□□ -0.08
SMARCB1-203ENST00000407082 EMILIN3Q9NT22 766 aa14.56□□□□□ -0.08
SMARCB1-203ENST00000407082 VPS54Q9P1Q0 977 aa14.56□□□□□ -0.08
SMARCB1-203ENST00000407082 DDX20Q9UHI6 824 aaKnown RBP14.56□□□□□ -0.08
SMARCB1-203ENST00000407082 PAXBP1Q9Y5B6 917 aa14.56□□□□□ -0.08
SMARCB1-203ENST00000407082 CNTNAP5Q8WYK1 1306 aa14.56□□□□□ -0.08
SMARCB1-203ENST00000407082 RRP9O43818 475 aaKnown RBP14.55□□□□□ -0.08
SMARCB1-203ENST00000407082 TOP1P11387 765 aaKnown RBP14.55□□□□□ -0.08
SMARCB1-203ENST00000407082 HOXA7P31268 230 aaPredicted RBP14.55□□□□□ -0.08
SMARCB1-203ENST00000407082 KCNJ6P48051 423 aa14.55□□□□□ -0.08
SMARCB1-203ENST00000407082 NOVP48745 357 aa14.55□□□□□ -0.08
SMARCB1-203ENST00000407082 MAP2K5Q13163 448 aa14.55□□□□□ -0.08
SMARCB1-203ENST00000407082 GRM4Q14833 912 aa14.55□□□□□ -0.08
SMARCB1-203ENST00000407082 LONRF3Q496Y0 759 aa14.55□□□□□ -0.08
SMARCB1-203ENST00000407082 ARL6IP4Q66PJ3 421 aaKnown RBP14.55□□□□□ -0.08
SMARCB1-203ENST00000407082 RCSD1Q6JBY9 416 aa14.55□□□□□ -0.08
SMARCB1-203ENST00000407082 LRRC47Q8N1G4 583 aaKnown RBP14.55□□□□□ -0.08
SMARCB1-203ENST00000407082 PNMA1Q8ND90 353 aa14.55□□□□□ -0.08
SMARCB1-203ENST00000407082 CCDC112Q8NEF3 446 aa14.55□□□□□ -0.08
SMARCB1-203ENST00000407082 TMEM47Q9BQJ4 181 aa14.55□□□□□ -0.08
SMARCB1-203ENST00000407082 VCPKMTQ9H867 229 aa14.55□□□□□ -0.08
SMARCB1-203ENST00000407082 KCND1Q9NSA2 647 aa14.55□□□□□ -0.08
SMARCB1-203ENST00000407082 PCDHB6Q9Y5E3 794 aa14.55□□□□□ -0.08
SMARCB1-203ENST00000407082 VCANP13611 3396 aa14.55□□□□□ -0.08
SMARCB1-203ENST00000407082 LOC285556D6RIA3 1793 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms