RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 GOLGA6L4A6NEF3 574 aa23.2■■□□□ 1.3
CHKB-201ENST00000406938 SOWAHBA6NEL2 793 aa23.2■■□□□ 1.3
CHKB-201ENST00000406938 STRNO43815 780 aa23.2■■□□□ 1.3
CHKB-201ENST00000406938 NR3C2P08235 984 aa23.2■■□□□ 1.3
CHKB-201ENST00000406938 MYCLP12524 364 aaPredicted RBP23.2■■□□□ 1.3
CHKB-201ENST00000406938 PTMSP20962 102 aa23.2■■□□□ 1.3
CHKB-201ENST00000406938 ADORA2AP29274 412 aa23.2■■□□□ 1.3
CHKB-201ENST00000406938 ALDH5A1P51649 535 aaPredicted RBP23.2■■□□□ 1.3
CHKB-201ENST00000406938 MRPS9P82933 396 aaKnown RBP23.2■■□□□ 1.3
CHKB-201ENST00000406938 CEP55Q53EZ4 464 aa23.2■■□□□ 1.3
CHKB-201ENST00000406938 AXDND1Q5T1B0 1012 aaPredicted RBP23.2■■□□□ 1.3
CHKB-201ENST00000406938 ARL6IP4Q66PJ3 421 aaKnown RBP23.2■■□□□ 1.3
CHKB-201ENST00000406938 ADD3Q9UEY8 706 aaKnown RBP23.2■■□□□ 1.3
CHKB-201ENST00000406938 SRPRBQ9Y5M8 271 aaKnown RBP23.2■■□□□ 1.3
CHKB-201ENST00000406938 ECM2O94769 699 aaPredicted RBP23.19■■□□□ 1.3
CHKB-201ENST00000406938 HSPA6P17066 643 aa23.19■■□□□ 1.3
CHKB-201ENST00000406938 CCND2P30279 289 aa23.19■■□□□ 1.3
CHKB-201ENST00000406938 PRPHP41219 470 aa23.19■■□□□ 1.3
CHKB-201ENST00000406938 GRIN1Q05586 938 aa23.19■■□□□ 1.3
CHKB-201ENST00000406938 GRB14Q14449 540 aa23.19■■□□□ 1.3
CHKB-201ENST00000406938 XRRA1Q6P2D8 792 aa23.19■■□□□ 1.3
CHKB-201ENST00000406938 FERMT2Q96AC1 680 aa23.19■■□□□ 1.3
CHKB-201ENST00000406938 FGD4Q96M96 766 aa23.19■■□□□ 1.3
CHKB-201ENST00000406938 CLIC6Q96NY7 704 aa23.19■■□□□ 1.3
CHKB-201ENST00000406938 MTMR9Q96QG7 549 aa23.19■■□□□ 1.3
CHKB-201ENST00000406938 DDX49Q9Y6V7 483 aaKnown RBP23.19■■□□□ 1.3
CHKB-201ENST00000406938 VWA3AA6NCI4 1184 aa23.19■■□□□ 1.3
CHKB-201ENST00000406938 CUTAO60888 179 aa23.19■■□□□ 1.3
CHKB-201ENST00000406938 ITGB5P18084 799 aa23.19■■□□□ 1.3
CHKB-201ENST00000406938 IL17AQ16552 155 aa23.19■■□□□ 1.3
CHKB-201ENST00000406938 ADALQ6DHV7 355 aa23.19■■□□□ 1.3
CHKB-201ENST00000406938 VSIG10LQ86VR7 867 aa23.19■■□□□ 1.3
CHKB-201ENST00000406938 MXRA8Q9BRK3 442 aa23.19■■□□□ 1.3
CHKB-201ENST00000406938 KCNMB3Q9NPA1 279 aa23.19■■□□□ 1.3
CHKB-201ENST00000406938 TBC1D8O95759 1140 aa23.18■■□□□ 1.3
CHKB-201ENST00000406938 C1QTNF8P60827 252 aa23.18■■□□□ 1.3
CHKB-201ENST00000406938 SETQ01105 290 aaPredicted RBP23.18■■□□□ 1.3
CHKB-201ENST00000406938 PLA2G4DQ86XP0 818 aa23.18■■□□□ 1.3
CHKB-201ENST00000406938 HAS1Q92839 578 aa23.18■■□□□ 1.3
CHKB-201ENST00000406938 IWS1Q96ST2 819 aa23.18■■□□□ 1.3
CHKB-201ENST00000406938 CFHR5Q9BXR6 569 aa23.18■■□□□ 1.3
CHKB-201ENST00000406938 RNF186Q9NXI6 227 aa23.18■■□□□ 1.3
CHKB-201ENST00000406938 UBIAD1Q9Y5Z9 338 aa23.18■■□□□ 1.3
CHKB-201ENST00000406938 ZNF236Q9UL36 1845 aa23.18■■□□□ 1.3
CHKB-201ENST00000406938 MEIS1O00470 390 aa23.17■■□□□ 1.3
CHKB-201ENST00000406938 EDNRBP24530 442 aa23.17■■□□□ 1.3
CHKB-201ENST00000406938 ETNPPLQ8TBG4 499 aa23.17■■□□□ 1.3
CHKB-201ENST00000406938 CSRNP2Q9H175 543 aa23.17■■□□□ 1.3
CHKB-201ENST00000406938 A0A1W2PQ27 194 aa23.16■■□□□ 1.3
CHKB-201ENST00000406938 A0A1W2PQ64 194 aa23.16■■□□□ 1.3
CHKB-201ENST00000406938 A0A1W2PQD8 194 aa23.16■■□□□ 1.3
CHKB-201ENST00000406938 SLC15A5A6NIM6 579 aa23.16■■□□□ 1.3
CHKB-201ENST00000406938 MSH4O15457 936 aa23.16■■□□□ 1.3
CHKB-201ENST00000406938 COBLO75128 1261 aa23.16■■□□□ 1.3
CHKB-201ENST00000406938 TRPA1O75762 1119 aa23.16■■□□□ 1.3
CHKB-201ENST00000406938 DTHD1Q6ZMT9 781 aa23.16■■□□□ 1.3
CHKB-201ENST00000406938 NIPA1Q7RTP0 329 aa23.16■■□□□ 1.3
CHKB-201ENST00000406938 GJA10Q969M2 543 aa23.16■■□□□ 1.3
CHKB-201ENST00000406938 UIMC1Q96RL1 719 aa23.16■■□□□ 1.3
CHKB-201ENST00000406938 WDR11Q9BZH6 1224 aa23.16■■□□□ 1.3
CHKB-201ENST00000406938 TBX3O15119 743 aa23.15■■□□□ 1.3
CHKB-201ENST00000406938 MARCH6O60337 910 aa23.15■■□□□ 1.3
CHKB-201ENST00000406938 TXKP42681 527 aa23.15■■□□□ 1.3
CHKB-201ENST00000406938 ZNF792Q3KQV3 632 aa23.15■■□□□ 1.3
CHKB-201ENST00000406938 SHC4Q6S5L8 630 aa23.15■■□□□ 1.3
CHKB-201ENST00000406938 GPT2Q8TD30 523 aa23.15■■□□□ 1.3
CHKB-201ENST00000406938 JADE2Q9NQC1 790 aa23.15■■□□□ 1.3
CHKB-201ENST00000406938 LRRC37A2A6NM11 1700 aa23.15■■□□□ 1.3
CHKB-201ENST00000406938 MTMR1Q13613 665 aa23.15■■□□□ 1.3
CHKB-201ENST00000406938 STXBP2Q15833 593 aa23.15■■□□□ 1.3
CHKB-201ENST00000406938 SPECC1Q5M775 1068 aa23.15■■□□□ 1.3
CHKB-201ENST00000406938 ZNF579Q8NAF0 562 aaKnown RBP23.15■■□□□ 1.3
CHKB-201ENST00000406938 MRPS27Q92552 414 aaKnown RBP23.15■■□□□ 1.3
CHKB-201ENST00000406938 INPP4AQ96PE3 977 aaPredicted RBP23.15■■□□□ 1.3
CHKB-201ENST00000406938 STAM2O75886 525 aa23.14■■□□□ 1.29
CHKB-201ENST00000406938 ARP10275 920 aa23.14■■□□□ 1.29
CHKB-201ENST00000406938 CTGFP29279 349 aa23.14■■□□□ 1.29
CHKB-201ENST00000406938 LACTBP83111 547 aaPredicted RBP23.14■■□□□ 1.29
CHKB-201ENST00000406938 PDE4DQ08499 809 aa23.14■■□□□ 1.29
CHKB-201ENST00000406938 MORN1Q5T089 497 aa23.14■■□□□ 1.29
CHKB-201ENST00000406938 DPP9Q86TI2 863 aa23.14■■□□□ 1.29
CHKB-201ENST00000406938 SLFN12Q8IYM2 578 aa23.14■■□□□ 1.29
CHKB-201ENST00000406938 FSIP1Q8NA03 581 aa23.14■■□□□ 1.29
CHKB-201ENST00000406938 FAM20AQ96MK3 541 aa23.14■■□□□ 1.29
CHKB-201ENST00000406938 MPHOSPH6Q99547 160 aaKnown RBP23.14■■□□□ 1.29
CHKB-201ENST00000406938 GOLPH3LQ9H4A5 285 aa23.14■■□□□ 1.29
CHKB-201ENST00000406938 TTC12Q9H892 705 aaPredicted RBP23.14■■□□□ 1.29
CHKB-201ENST00000406938 KCNH7Q9NS40 1196 aa23.14■■□□□ 1.29
CHKB-201ENST00000406938 B4DLN1 442 aa23.13■■□□□ 1.29
CHKB-201ENST00000406938 TNPO2O14787 897 aaKnown RBP23.13■■□□□ 1.29
CHKB-201ENST00000406938 RGS20O76081 388 aa23.13■■□□□ 1.29
CHKB-201ENST00000406938 MBD3O95983 291 aa23.13■■□□□ 1.29
CHKB-201ENST00000406938 CMA1P23946 247 aa23.13■■□□□ 1.29
CHKB-201ENST00000406938 LONP1P36776 959 aaKnown RBP23.13■■□□□ 1.29
CHKB-201ENST00000406938 TECP42680 631 aa23.13■■□□□ 1.29
CHKB-201ENST00000406938 TMEM266Q2M3C6 531 aa23.13■■□□□ 1.29
CHKB-201ENST00000406938 RESP18Q5W5W9 173 aa23.13■■□□□ 1.29
CHKB-201ENST00000406938 ZNFX1Q9P2E3 1918 aaKnown RBP23.13■■□□□ 1.29
CHKB-201ENST00000406938 LOC102724159A0A0B4J2E5 919 aa23.12■■□□□ 1.29
CHKB-201ENST00000406938 FXR2P51116 673 aaKnown RBP eCLIP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms