RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 TPX2Q9ULW0 747 aaKnown RBP13.07□□□□□ -0.32
SMCR8-201ENST00000406438 FAF1Q9UNN5 650 aaPredicted RBP13.07□□□□□ -0.32
SMCR8-201ENST00000406438 TNNQ9UQP3 1299 aa13.07□□□□□ -0.32
SMCR8-201ENST00000406438 NFKBIAP25963 317 aa13.07□□□□□ -0.32
SMCR8-201ENST00000406438 STAT2P52630 851 aa13.07□□□□□ -0.32
SMCR8-201ENST00000406438 MYSM1Q5VVJ2 828 aa13.07□□□□□ -0.32
SMCR8-201ENST00000406438 KIAA0825Q8IV33 1275 aa13.07□□□□□ -0.32
SMCR8-201ENST00000406438 PSMC2P35998 433 aaKnown RBP13.07□□□□□ -0.32
SMCR8-201ENST00000406438 DESI2Q9BSY9 194 aa13.07□□□□□ -0.32
SMCR8-201ENST00000406438 PPARGP37231 505 aaPredicted RBP13.07□□□□□ -0.32
SMCR8-201ENST00000406438 BAG6P46379 1132 aa13.07□□□□□ -0.32
SMCR8-201ENST00000406438 MESDQ14696 234 aa13.07□□□□□ -0.32
SMCR8-201ENST00000406438 C10orf76Q5T2E6 689 aa13.07□□□□□ -0.32
SMCR8-201ENST00000406438 GPATCH4Q5T3I0 446 aaKnown RBP13.07□□□□□ -0.32
SMCR8-201ENST00000406438 OTUD7AQ8TE49 926 aaPredicted RBP13.07□□□□□ -0.32
SMCR8-201ENST00000406438 MAGOHBQ96A72 148 aaKnown RBP13.07□□□□□ -0.32
SMCR8-201ENST00000406438 STK17AQ9UEE5 414 aa13.07□□□□□ -0.32
SMCR8-201ENST00000406438 ATXN8OSP0DMR3 200 aa13.06□□□□□ -0.32
SMCR8-201ENST00000406438 GAP43P17677 238 aa13.06□□□□□ -0.32
SMCR8-201ENST00000406438 SNCBQ16143 134 aa13.06□□□□□ -0.32
SMCR8-201ENST00000406438 PI4K2BQ8TCG2 481 aa13.06□□□□□ -0.32
SMCR8-201ENST00000406438 SYMPKQ92797 1274 aaKnown RBP13.06□□□□□ -0.32
SMCR8-201ENST00000406438 AK8Q96MA6 479 aa13.06□□□□□ -0.32
SMCR8-201ENST00000406438 NT5C1BQ96P26 610 aa13.06□□□□□ -0.32
SMCR8-201ENST00000406438 EPN1Q9Y6I3 576 aaPredicted RBP13.06□□□□□ -0.32
SMCR8-201ENST00000406438 FOSP01100 380 aaPredicted RBP13.06□□□□□ -0.32
SMCR8-201ENST00000406438 RASSF7Q02833 373 aa13.06□□□□□ -0.32
SMCR8-201ENST00000406438 ZNF608Q9ULD9 1512 aaPredicted RBP13.06□□□□□ -0.32
SMCR8-201ENST00000406438 SLC4A1P02730 911 aa13.06□□□□□ -0.32
SMCR8-201ENST00000406438 THOC5Q13769 683 aaKnown RBP13.06□□□□□ -0.32
SMCR8-201ENST00000406438 ZC3H15Q8WU90 426 aaKnown RBP13.06□□□□□ -0.32
SMCR8-201ENST00000406438 GPKOWQ92917 476 aaPredicted RBP eCLIP13.06□□□□□ -0.32
SMCR8-201ENST00000406438 CNOT6LQ96LI5 555 aaKnown RBP13.06□□□□□ -0.32
SMCR8-201ENST00000406438 CCDC138Q96M89 665 aa13.06□□□□□ -0.32
SMCR8-201ENST00000406438 PPP2R2CQ9Y2T4 447 aa13.06□□□□□ -0.32
SMCR8-201ENST00000406438 GUCY2DQ02846 1103 aa13.06□□□□□ -0.32
SMCR8-201ENST00000406438 SCYL3Q8IZE3 742 aa13.06□□□□□ -0.32
SMCR8-201ENST00000406438 C17orf53Q8N3J3 647 aaPredicted RBP13.06□□□□□ -0.32
SMCR8-201ENST00000406438 JRKLQ9Y4A0 524 aa13.06□□□□□ -0.32
SMCR8-201ENST00000406438 ART3Q13508 389 aa13.06□□□□□ -0.32
SMCR8-201ENST00000406438 ZNF526Q8TF50 670 aaPredicted RBP13.06□□□□□ -0.32
SMCR8-201ENST00000406438 LGR6Q9HBX8 967 aa13.06□□□□□ -0.32
SMCR8-201ENST00000406438 INTS9Q9NV88 658 aaKnown RBP13.06□□□□□ -0.32
SMCR8-201ENST00000406438 CIITAP33076 1130 aa13.06□□□□□ -0.32
SMCR8-201ENST00000406438 CCNYQ8ND76 341 aa13.06□□□□□ -0.32
SMCR8-201ENST00000406438 GJA10Q969M2 543 aa13.06□□□□□ -0.32
SMCR8-201ENST00000406438 TRIM35Q9UPQ4 493 aa13.06□□□□□ -0.32
SMCR8-201ENST00000406438 APBA1Q02410 837 aa13.05□□□□□ -0.32
SMCR8-201ENST00000406438 SPATA1Q5VX52 437 aa13.05□□□□□ -0.32
SMCR8-201ENST00000406438 SRRM1Q8IYB3 904 aaKnown RBP13.05□□□□□ -0.32
SMCR8-201ENST00000406438 CDHR1Q96JP9 859 aa13.05□□□□□ -0.32
SMCR8-201ENST00000406438 MRPL47Q9HD33 250 aaKnown RBP13.05□□□□□ -0.32
SMCR8-201ENST00000406438 BLMP54132 1417 aaPredicted RBP13.05□□□□□ -0.32
SMCR8-201ENST00000406438 MYOM2P54296 1465 aa13.05□□□□□ -0.32
SMCR8-201ENST00000406438 MICAL3Q7RTP6 2002 aa13.05□□□□□ -0.32
SMCR8-201ENST00000406438 PYGLP06737 847 aa13.05□□□□□ -0.32
SMCR8-201ENST00000406438 H2AFZP0C0S5 128 aa13.05□□□□□ -0.32
SMCR8-201ENST00000406438 ANXA13P27216 316 aa13.05□□□□□ -0.32
SMCR8-201ENST00000406438 GCKP35557 465 aa13.05□□□□□ -0.32
SMCR8-201ENST00000406438 KCTD2Q14681 263 aa13.05□□□□□ -0.32
SMCR8-201ENST00000406438 H2AFVQ71UI9 128 aa13.05□□□□□ -0.32
SMCR8-201ENST00000406438 KSR1Q8IVT5 923 aa13.05□□□□□ -0.32
SMCR8-201ENST00000406438 MCUQ8NE86 351 aa13.05□□□□□ -0.32
SMCR8-201ENST00000406438 TRIM4Q9C037 500 aa13.05□□□□□ -0.32
SMCR8-201ENST00000406438 SCHIP1Q9P0W5 487 aaPredicted RBP13.05□□□□□ -0.32
SMCR8-201ENST00000406438 ACTN1P12814 892 aa13.05□□□□□ -0.32
SMCR8-201ENST00000406438 KCNA6P17658 529 aa13.05□□□□□ -0.32
SMCR8-201ENST00000406438 MSH2P43246 934 aa13.05□□□□□ -0.32
SMCR8-201ENST00000406438 SGO2Q562F6 1265 aa13.05□□□□□ -0.32
SMCR8-201ENST00000406438 KMT5AQ9NQR1 393 aa13.05□□□□□ -0.32
SMCR8-201ENST00000406438 SUCLA2Q9P2R7 463 aaPredicted RBP13.05□□□□□ -0.32
SMCR8-201ENST00000406438 ADAMTS12P58397 1594 aa13.05□□□□□ -0.32
SMCR8-201ENST00000406438 EHHADHQ08426 723 aa13.05□□□□□ -0.32
SMCR8-201ENST00000406438 ARHGEF18Q6ZSZ5 1173 aa13.05□□□□□ -0.32
SMCR8-201ENST00000406438 HAUS4Q9H6D7 363 aa13.05□□□□□ -0.32
SMCR8-201ENST00000406438 INO80B-WBP1J3KQ70 363 aa13.05□□□□□ -0.32
SMCR8-201ENST00000406438 INO80BQ9C086 356 aaPredicted RBP13.05□□□□□ -0.32
SMCR8-201ENST00000406438 WDR64B1ANS9 1081 aa13.05□□□□□ -0.32
SMCR8-201ENST00000406438 IL13P35225 146 aa13.05□□□□□ -0.32
SMCR8-201ENST00000406438 BTDP43251 543 aa13.05□□□□□ -0.32
SMCR8-201ENST00000406438 FBXW4P57775 412 aa13.05□□□□□ -0.32
SMCR8-201ENST00000406438 RNF217Q8TC41 542 aa13.05□□□□□ -0.32
SMCR8-201ENST00000406438 BCAS4Q8TDM0 211 aa13.05□□□□□ -0.32
SMCR8-201ENST00000406438 DEPDC1BQ8WUY9 529 aa13.05□□□□□ -0.32
SMCR8-201ENST00000406438 GCNT4Q9P109 453 aa13.05□□□□□ -0.32
SMCR8-201ENST00000406438 TLK1Q9UKI8 766 aa13.05□□□□□ -0.32
SMCR8-201ENST00000406438 CMA1P23946 247 aa13.04□□□□□ -0.32
SMCR8-201ENST00000406438 NDUFA8P51970 172 aa13.04□□□□□ -0.32
SMCR8-201ENST00000406438 DOK7Q18PE1 504 aa13.04□□□□□ -0.32
SMCR8-201ENST00000406438 RNF139Q8WU17 664 aa13.04□□□□□ -0.32
SMCR8-201ENST00000406438 AMNQ9BXJ7 453 aa13.04□□□□□ -0.32
SMCR8-201ENST00000406438 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.04□□□□□ -0.32
SMCR8-201ENST00000406438 TMEM232C9JQI7 657 aa13.04□□□□□ -0.32
SMCR8-201ENST00000406438 NR2F2P24468 414 aa13.04□□□□□ -0.32
SMCR8-201ENST00000406438 Q3C1V9 767 aa13.04□□□□□ -0.32
SMCR8-201ENST00000406438 CNKSR1Q969H4 720 aa13.04□□□□□ -0.32
SMCR8-201ENST00000406438 DONSONQ9NYP3 566 aa13.04□□□□□ -0.32
SMCR8-201ENST00000406438 TNKSO95271 1327 aa13.04□□□□□ -0.32
SMCR8-201ENST00000406438 ARL4AP40617 200 aa13.04□□□□□ -0.32
SMCR8-201ENST00000406438 TUBGCP2Q9BSJ2 902 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms