RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 EDNRBP24530 442 aa11.94□□□□□ -0.5
FAM49A-202ENST00000406434 PSMA5P28066 241 aa11.94□□□□□ -0.5
FAM49A-202ENST00000406434 CST5P28325 142 aaPredicted RBP11.94□□□□□ -0.5
FAM49A-202ENST00000406434 MAGEA10P43363 369 aaPredicted RBP11.94□□□□□ -0.5
FAM49A-202ENST00000406434 APOBRQ0VD83 1088 aa11.94□□□□□ -0.5
FAM49A-202ENST00000406434 PPP2R5BQ15173 497 aa11.94□□□□□ -0.5
FAM49A-202ENST00000406434 RTN1Q16799 776 aa11.94□□□□□ -0.5
FAM49A-202ENST00000406434 APOA5Q6Q788 366 aa11.94□□□□□ -0.5
FAM49A-202ENST00000406434 CXCL17Q6UXB2 119 aa11.94□□□□□ -0.5
FAM49A-202ENST00000406434 TMTC3Q6ZXV5 915 aa11.94□□□□□ -0.5
FAM49A-202ENST00000406434 OR6J1Q8NGC5 347 aa11.94□□□□□ -0.5
FAM49A-202ENST00000406434 SCFD2Q8WU76 684 aa11.94□□□□□ -0.5
FAM49A-202ENST00000406434 COPS5Q92905 334 aa11.94□□□□□ -0.5
FAM49A-202ENST00000406434 LBHD1Q9BQE6 289 aaPredicted RBP11.94□□□□□ -0.5
FAM49A-202ENST00000406434 PXMP2Q9NR77 195 aa11.94□□□□□ -0.5
FAM49A-202ENST00000406434 Q9Y3F1 56 aa11.94□□□□□ -0.5
FAM49A-202ENST00000406434 RBM47A0AV96 593 aaKnown RBP11.93□□□□□ -0.5
FAM49A-202ENST00000406434 GOLGA8AA7E2F4 631 aa11.93□□□□□ -0.5
FAM49A-202ENST00000406434 GOLGA8BA8MQT2 603 aa11.93□□□□□ -0.5
FAM49A-202ENST00000406434 CTAGE5O15320 804 aa11.93□□□□□ -0.5
FAM49A-202ENST00000406434 TTLL4Q14679 1199 aa11.93□□□□□ -0.5
FAM49A-202ENST00000406434 SNX17Q15036 470 aa11.93□□□□□ -0.5
FAM49A-202ENST00000406434 LY6KQ17RY6 165 aa11.93□□□□□ -0.5
FAM49A-202ENST00000406434 SAMD3Q8N6K7 520 aa11.93□□□□□ -0.5
FAM49A-202ENST00000406434 SMARCC2Q8TAQ2 1214 aa11.93□□□□□ -0.5
FAM49A-202ENST00000406434 BRF1Q92994 677 aa11.93□□□□□ -0.5
FAM49A-202ENST00000406434 CUL5Q93034 780 aa11.93□□□□□ -0.5
FAM49A-202ENST00000406434 UBE2OQ9C0C9 1292 aaKnown RBP11.93□□□□□ -0.5
FAM49A-202ENST00000406434 RBM28Q9NW13 759 aaKnown RBP11.93□□□□□ -0.5
FAM49A-202ENST00000406434 MAP3K20Q9NYL2 800 aaKnown RBP11.93□□□□□ -0.5
FAM49A-202ENST00000406434 DCDC2CA8MYV0 355 aa11.92□□□□□ -0.5
FAM49A-202ENST00000406434 EIF3JO75822 258 aaKnown RBP11.92□□□□□ -0.5
FAM49A-202ENST00000406434 MYL3P08590 195 aa11.92□□□□□ -0.5
FAM49A-202ENST00000406434 RPS6KB1P23443 525 aa11.92□□□□□ -0.5
FAM49A-202ENST00000406434 C1orf53Q5VUE5 145 aa11.92□□□□□ -0.5
FAM49A-202ENST00000406434 USP17L6PQ6QN14 398 aa11.92□□□□□ -0.5
FAM49A-202ENST00000406434 HEATR3Q7Z4Q2 680 aa11.92□□□□□ -0.5
FAM49A-202ENST00000406434 SH3RF1Q7Z6J0 888 aa11.92□□□□□ -0.5
FAM49A-202ENST00000406434 PDCD2LQ9BRP1 358 aa11.92□□□□□ -0.5
FAM49A-202ENST00000406434 TMEM39AQ9NV64 488 aa11.92□□□□□ -0.5
FAM49A-202ENST00000406434 V9GY48 417 aaPredicted RBP11.92□□□□□ -0.5
FAM49A-202ENST00000406434 ELP1O95163 1332 aa11.92□□□□□ -0.5
FAM49A-202ENST00000406434 A0A0U1RQG5 324 aaPredicted RBP11.92□□□□□ -0.5
FAM49A-202ENST00000406434 TRIM43BA6NCK2 446 aa11.92□□□□□ -0.5
FAM49A-202ENST00000406434 ARVCFO00192 962 aa11.92□□□□□ -0.5
FAM49A-202ENST00000406434 NKRFO15226 690 aaKnown RBP eCLIP11.92□□□□□ -0.5
FAM49A-202ENST00000406434 SORBS3O60504 671 aa11.92□□□□□ -0.5
FAM49A-202ENST00000406434 ARIH2O95376 493 aa11.92□□□□□ -0.5
FAM49A-202ENST00000406434 CLTBP09497 229 aa11.92□□□□□ -0.5
FAM49A-202ENST00000406434 CCND2P30279 289 aa11.92□□□□□ -0.5
FAM49A-202ENST00000406434 ADD1P35611 737 aaKnown RBP11.92□□□□□ -0.5
FAM49A-202ENST00000406434 CPT1AP50416 773 aa11.92□□□□□ -0.5
FAM49A-202ENST00000406434 METAP2P50579 478 aaKnown RBP eCLIP11.92□□□□□ -0.5
FAM49A-202ENST00000406434 CHMP4BP1P59074 171 aa11.92□□□□□ -0.5
FAM49A-202ENST00000406434 NKX3-2P78367 333 aa11.92□□□□□ -0.5
FAM49A-202ENST00000406434 BRDTQ58F21 947 aaPredicted RBP11.92□□□□□ -0.5
FAM49A-202ENST00000406434 VSIG10LQ86VR7 867 aa11.92□□□□□ -0.5
FAM49A-202ENST00000406434 KCNV2Q8TDN2 545 aa11.92□□□□□ -0.5
FAM49A-202ENST00000406434 GPKOWQ92917 476 aaPredicted RBP eCLIP11.92□□□□□ -0.5
FAM49A-202ENST00000406434 TRIM43Q96BQ3 446 aaPredicted RBP11.92□□□□□ -0.5
FAM49A-202ENST00000406434 GDF15Q99988 308 aa11.92□□□□□ -0.5
FAM49A-202ENST00000406434 PSTPIP2Q9H939 334 aa11.92□□□□□ -0.5
FAM49A-202ENST00000406434 MRVI1Q9Y6F6 885 aa11.92□□□□□ -0.5
FAM49A-202ENST00000406434 LRRC37A2A6NM11 1700 aa11.91□□□□□ -0.5
FAM49A-202ENST00000406434 MYH7BA7E2Y1 1941 aa11.91□□□□□ -0.5
FAM49A-202ENST00000406434 TRIOBPQ9H2D6 2365 aa11.91□□□□□ -0.5
FAM49A-202ENST00000406434 CABYRO75952 493 aa11.91□□□□□ -0.5
FAM49A-202ENST00000406434 CDC27P30260 824 aa11.91□□□□□ -0.5
FAM49A-202ENST00000406434 PSMC6P62333 389 aa11.91□□□□□ -0.5
FAM49A-202ENST00000406434 GHRHRQ02643 423 aa11.91□□□□□ -0.5
FAM49A-202ENST00000406434 ITGA7Q13683 1181 aa11.91□□□□□ -0.5
FAM49A-202ENST00000406434 PGM5Q15124 567 aa11.91□□□□□ -0.5
FAM49A-202ENST00000406434 CCDC62Q6P9F0 684 aa11.91□□□□□ -0.5
FAM49A-202ENST00000406434 RUFY3Q7L099 469 aa11.91□□□□□ -0.5
FAM49A-202ENST00000406434 IL31RAQ8NI17 732 aa11.91□□□□□ -0.5
FAM49A-202ENST00000406434 BADQ92934 168 aa11.91□□□□□ -0.5
FAM49A-202ENST00000406434 LARP6Q9BRS8 491 aaKnown RBP11.91□□□□□ -0.5
FAM49A-202ENST00000406434 PDLIM7Q9NR12 457 aa11.91□□□□□ -0.5
FAM49A-202ENST00000406434 FAM217BQ9NTX9 383 aaPredicted RBP11.91□□□□□ -0.5
FAM49A-202ENST00000406434 POLR3EQ9NVU0 708 aa11.91□□□□□ -0.5
FAM49A-202ENST00000406434 RTEL1Q9NZ71 1219 aa11.91□□□□□ -0.5
FAM49A-202ENST00000406434 DDX41Q9UJV9 622 aaKnown RBP11.91□□□□□ -0.5
FAM49A-202ENST00000406434 CYP46A1Q9Y6A2 500 aa11.91□□□□□ -0.5
FAM49A-202ENST00000406434 CCDC196A0A1B0GTZ2 297 aa11.9□□□□□ -0.5
FAM49A-202ENST00000406434 MEIS2O14770 477 aa11.9□□□□□ -0.5
FAM49A-202ENST00000406434 TLR3O15455 904 aaKnown RBP11.9□□□□□ -0.5
FAM49A-202ENST00000406434 EPB41L2O43491 1005 aaKnown RBP11.9□□□□□ -0.5
FAM49A-202ENST00000406434 GH1P01241 217 aa11.9□□□□□ -0.5
FAM49A-202ENST00000406434 RAG1P15918 1043 aa11.9□□□□□ -0.5
FAM49A-202ENST00000406434 BMP8BP34820 402 aa11.9□□□□□ -0.5
FAM49A-202ENST00000406434 CDK7P50613 346 aa11.9□□□□□ -0.5
FAM49A-202ENST00000406434 NAPAP54920 295 aa11.9□□□□□ -0.5
FAM49A-202ENST00000406434 CCT2P78371 535 aaKnown RBP11.9□□□□□ -0.5
FAM49A-202ENST00000406434 FAAP100Q0VG06 881 aa11.9□□□□□ -0.5
FAM49A-202ENST00000406434 ANKRD33Q7Z3H0 272 aa11.9□□□□□ -0.5
FAM49A-202ENST00000406434 DHX37Q8IY37 1157 aaKnown RBP11.9□□□□□ -0.5
FAM49A-202ENST00000406434 PPP1R13LQ8WUF5 828 aa11.9□□□□□ -0.5
FAM49A-202ENST00000406434 AFG1LQ8WV93 481 aa11.9□□□□□ -0.5
FAM49A-202ENST00000406434 TOX2Q96NM4 488 aa11.9□□□□□ -0.5
FAM49A-202ENST00000406434 UPF3BQ9BZI7 483 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms