RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 NBPF20Q3BBV1 942 aa15.38■□□□□ 0.05
SDF4-203ENST00000403997 TSGA10IPQ3SY00 556 aa15.38■□□□□ 0.05
SDF4-203ENST00000403997 FAM47CQ5HY64 1035 aa15.38■□□□□ 0.05
SDF4-203ENST00000403997 DHX32Q7L7V1 743 aaKnown RBP15.38■□□□□ 0.05
SDF4-203ENST00000403997 VSIG10LQ86VR7 867 aa15.38■□□□□ 0.05
SDF4-203ENST00000403997 RASEFQ8IZ41 740 aa15.38■□□□□ 0.05
SDF4-203ENST00000403997 CMTR1Q8N1G2 835 aaKnown RBP15.38■□□□□ 0.05
SDF4-203ENST00000403997 FANCBQ8NB91 859 aa15.38■□□□□ 0.05
SDF4-203ENST00000403997 ALDH8A1Q9H2A2 487 aaPredicted RBP15.38■□□□□ 0.05
SDF4-203ENST00000403997 HIPK3Q9H422 1215 aa15.38■□□□□ 0.05
SDF4-203ENST00000403997 MRVI1Q9Y6F6 885 aa15.38■□□□□ 0.05
SDF4-203ENST00000403997 SUPT20HL2P0C7V6 817 aa15.37■□□□□ 0.05
SDF4-203ENST00000403997 CSF2RAP15509 400 aa15.37■□□□□ 0.05
SDF4-203ENST00000403997 CCND2P30279 289 aa15.37■□□□□ 0.05
SDF4-203ENST00000403997 EXOSC10Q01780 885 aaKnown RBP15.37■□□□□ 0.05
SDF4-203ENST00000403997 ARHGAP1Q07960 439 aa15.37■□□□□ 0.05
SDF4-203ENST00000403997 KRT32Q14532 448 aa15.37■□□□□ 0.05
SDF4-203ENST00000403997 ADCK5Q3MIX3 580 aa15.37■□□□□ 0.05
SDF4-203ENST00000403997 SGMS1Q86VZ5 419 aa15.37■□□□□ 0.05
SDF4-203ENST00000403997 MICU3Q86XE3 530 aa15.37■□□□□ 0.05
SDF4-203ENST00000403997 DHX37Q8IY37 1157 aaKnown RBP15.37■□□□□ 0.05
SDF4-203ENST00000403997 CCDC82Q8N4S0 544 aa15.37■□□□□ 0.05
SDF4-203ENST00000403997 IL31RAQ8NI17 732 aa15.37■□□□□ 0.05
SDF4-203ENST00000403997 PPP1R13LQ8WUF5 828 aa15.37■□□□□ 0.05
SDF4-203ENST00000403997 CUL5Q93034 780 aa15.37■□□□□ 0.05
SDF4-203ENST00000403997 ZFP91Q96JP5 570 aaPredicted RBP15.37■□□□□ 0.05
SDF4-203ENST00000403997 TCEANC2Q96MN5 208 aa15.37■□□□□ 0.05
SDF4-203ENST00000403997 TRMT13Q9NUP7 481 aaKnown RBP15.37■□□□□ 0.05
SDF4-203ENST00000403997 DDX41Q9UJV9 622 aaKnown RBP15.37■□□□□ 0.05
SDF4-203ENST00000403997 MMP3P08254 477 aa15.36■□□□□ 0.05
SDF4-203ENST00000403997 CASTP20810 708 aaKnown RBP15.36■□□□□ 0.05
SDF4-203ENST00000403997 CCL23P55773 120 aa15.36■□□□□ 0.05
SDF4-203ENST00000403997 LAMC2Q13753 1193 aa15.36■□□□□ 0.05
SDF4-203ENST00000403997 NFRKBQ6P4R8 1299 aa15.36■□□□□ 0.05
SDF4-203ENST00000403997 KCNV1Q6PIU1 500 aa15.36■□□□□ 0.05
SDF4-203ENST00000403997 SMARCC2Q8TAQ2 1214 aa15.36■□□□□ 0.05
SDF4-203ENST00000403997 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.36■□□□□ 0.051e-10■■□□□ 11.9
SDF4-203ENST00000403997 MTMR10Q9NXD2 777 aa15.36■□□□□ 0.05
SDF4-203ENST00000403997 hCG_1642624A0A1W2PR95 340 aa15.35■□□□□ 0.05
SDF4-203ENST00000403997 SORBS3O60504 671 aa15.35■□□□□ 0.05
SDF4-203ENST00000403997 RGS20O76081 388 aa15.35■□□□□ 0.05
SDF4-203ENST00000403997 HMGB1P09429 215 aaKnown RBP15.35■□□□□ 0.05
SDF4-203ENST00000403997 ACRP10323 421 aa15.35■□□□□ 0.05
SDF4-203ENST00000403997 CYP2C9P11712 490 aa15.35■□□□□ 0.05
SDF4-203ENST00000403997 SMAD3P84022 425 aaKnown RBP15.35■□□□□ 0.05
SDF4-203ENST00000403997 DGKDQ16760 1214 aa15.35■□□□□ 0.05
SDF4-203ENST00000403997 TMEM240Q5SV17 173 aa15.35■□□□□ 0.05
SDF4-203ENST00000403997 FAM109BQ6ICB4 259 aaPredicted RBP15.35■□□□□ 0.05
SDF4-203ENST00000403997 TMTC3Q6ZXV5 915 aa15.35■□□□□ 0.05
SDF4-203ENST00000403997 C16orf59Q7L2K0 433 aa15.35■□□□□ 0.05
SDF4-203ENST00000403997 NOC4LQ9BVI4 516 aaKnown RBP15.35■□□□□ 0.05
SDF4-203ENST00000403997 UMODL1Q5DID0 1318 aa15.35■□□□□ 0.05
SDF4-203ENST00000403997 TGFB3P10600 412 aa15.34■□□□□ 0.05
SDF4-203ENST00000403997 FGD1P98174 961 aa15.34■□□□□ 0.05
SDF4-203ENST00000403997 APOA5Q6Q788 366 aa15.34■□□□□ 0.05
SDF4-203ENST00000403997 USP17L6PQ6QN14 398 aa15.34■□□□□ 0.05
SDF4-203ENST00000403997 ZNF365Q70YC5 407 aa15.34■□□□□ 0.05
SDF4-203ENST00000403997 PPTC7Q8NI37 304 aa15.34■□□□□ 0.05
SDF4-203ENST00000403997 EMID1Q96A84 441 aaPredicted RBP15.34■□□□□ 0.05
SDF4-203ENST00000403997 FAM161BQ96MY7 647 aa15.34■□□□□ 0.05
SDF4-203ENST00000403997 PSTPIP2Q9H939 334 aa15.34■□□□□ 0.05
SDF4-203ENST00000403997 IL23AQ9NPF7 189 aa15.34■□□□□ 0.05
SDF4-203ENST00000403997 BRPF3Q9ULD4 1205 aa15.34■□□□□ 0.05
SDF4-203ENST00000403997 NAP1L2Q9ULW6 460 aaPredicted RBP15.34■□□□□ 0.05
SDF4-203ENST00000403997 KIAA1217Q5T5P2 1943 aa15.33■□□□□ 0.05
SDF4-203ENST00000403997 LAMA2P24043 3122 aaKnown RBP15.33■□□□□ 0.05
SDF4-203ENST00000403997 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.33■□□□□ 0.04
SDF4-203ENST00000403997 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.33■□□□□ 0.04
SDF4-203ENST00000403997 PIK3CDO00329 1044 aa15.33■□□□□ 0.04
SDF4-203ENST00000403997 MEIS2O14770 477 aa15.33■□□□□ 0.04
SDF4-203ENST00000403997 ZBTB43O43298 467 aa15.33■□□□□ 0.04
SDF4-203ENST00000403997 GGPS1O95749 300 aa15.33■□□□□ 0.04
SDF4-203ENST00000403997 PTPN11Q06124 597 aaPredicted RBP15.33■□□□□ 0.04
SDF4-203ENST00000403997 RTN1Q16799 776 aa15.33■□□□□ 0.04
SDF4-203ENST00000403997 CELF3Q5SZQ8 465 aaKnown RBP15.33■□□□□ 0.04
SDF4-203ENST00000403997 ZNF697Q5TEC3 545 aa15.33■□□□□ 0.04
SDF4-203ENST00000403997 MYSM1Q5VVJ2 828 aa15.33■□□□□ 0.04
SDF4-203ENST00000403997 GPKOWQ92917 476 aaPredicted RBP eCLIP15.33■□□□□ 0.04
SDF4-203ENST00000403997 SPATA33Q96N06 139 aa15.33■□□□□ 0.04
SDF4-203ENST00000403997 MLXIPQ9HAP2 919 aa15.33■□□□□ 0.04
SDF4-203ENST00000403997 RBM28Q9NW13 759 aaKnown RBP15.33■□□□□ 0.04
SDF4-203ENST00000403997 RTEL1Q9NZ71 1219 aa15.33■□□□□ 0.04
SDF4-203ENST00000403997 NOD1Q9Y239 953 aa15.33■□□□□ 0.04
SDF4-203ENST00000403997 KLF18A0A0U1RQI7 1052 aa15.32■□□□□ 0.04
SDF4-203ENST00000403997 PPFIA4O75335 1185 aa15.32■□□□□ 0.04
SDF4-203ENST00000403997 STAM2O75886 525 aa15.32■□□□□ 0.04
SDF4-203ENST00000403997 REC8O95072 547 aa15.32■□□□□ 0.04
SDF4-203ENST00000403997 FGBP02675 491 aa15.32■□□□□ 0.04
SDF4-203ENST00000403997 CPA1P15085 419 aa15.32■□□□□ 0.04
SDF4-203ENST00000403997 HSPA4P34932 840 aa15.32■□□□□ 0.04
SDF4-203ENST00000403997 MRPS9P82933 396 aaKnown RBP15.32■□□□□ 0.04
SDF4-203ENST00000403997 SP2Q02086 613 aa15.32■□□□□ 0.04
SDF4-203ENST00000403997 GNPTABQ3T906 1256 aa15.32■□□□□ 0.04
SDF4-203ENST00000403997 PSRC1Q6PGN9 363 aaPredicted RBP15.32■□□□□ 0.04
SDF4-203ENST00000403997 HEATR3Q7Z4Q2 680 aa15.32■□□□□ 0.04
SDF4-203ENST00000403997 RPUSD2Q8IZ73 545 aaKnown RBP15.32■□□□□ 0.04
SDF4-203ENST00000403997 KAT2BQ92831 832 aa15.32■□□□□ 0.04
SDF4-203ENST00000403997 KCNB2Q92953 911 aa15.32■□□□□ 0.04
SDF4-203ENST00000403997 SCLYQ96I15 445 aa15.32■□□□□ 0.04
SDF4-203ENST00000403997 JAKMIP1Q96N16 626 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms