RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 FERMT2Q96AC1 680 aa22.07■■□□□ 1.12
RTN4-207ENST00000402434 C22orf23Q9BZE7 217 aa22.07■■□□□ 1.12
RTN4-207ENST00000402434 DNAH12Q6ZR08 3092 aa22.07■■□□□ 1.12
RTN4-207ENST00000402434 A0A1W2PQ45 241 aaPredicted RBP22.06■■□□□ 1.12
RTN4-207ENST00000402434 A0A1W2PQY0 241 aa22.06■■□□□ 1.12
RTN4-207ENST00000402434 SMCO2A6NFE2 343 aa22.06■■□□□ 1.12
RTN4-207ENST00000402434 PFKFB2O60825 505 aa22.06■■□□□ 1.12
RTN4-207ENST00000402434 ARIH2O95376 493 aa22.06■■□□□ 1.12
RTN4-207ENST00000402434 SCRN1Q12765 414 aa22.06■■□□□ 1.12
RTN4-207ENST00000402434 STK3Q13188 491 aa22.06■■□□□ 1.12
RTN4-207ENST00000402434 SNX17Q15036 470 aa22.06■■□□□ 1.12
RTN4-207ENST00000402434 FSCN1Q16658 493 aaKnown RBP22.06■■□□□ 1.12
RTN4-207ENST00000402434 XRRA1Q6P2D8 792 aa22.06■■□□□ 1.12
RTN4-207ENST00000402434 SLC39A5Q6ZMH5 540 aa22.06■■□□□ 1.12
RTN4-207ENST00000402434 SLC26A6Q9BXS9 759 aa22.06■■□□□ 1.12
RTN4-207ENST00000402434 GLT8D2Q9H1C3 349 aa22.06■■□□□ 1.12
RTN4-207ENST00000402434 NR2E3Q9Y5X4 410 aa22.06■■□□□ 1.12
RTN4-207ENST00000402434 ESYT2A0FGR8 921 aa22.05■■□□□ 1.12
RTN4-207ENST00000402434 CPLX1O14810 134 aa22.05■■□□□ 1.12
RTN4-207ENST00000402434 STAM2O75886 525 aa22.05■■□□□ 1.12
RTN4-207ENST00000402434 ASGR1P07306 291 aa22.05■■□□□ 1.12
RTN4-207ENST00000402434 MRPS9P82933 396 aaKnown RBP22.05■■□□□ 1.12
RTN4-207ENST00000402434 BEX3Q00994 111 aa22.05■■□□□ 1.12
RTN4-207ENST00000402434 UBE2SQ16763 222 aa22.05■■□□□ 1.12
RTN4-207ENST00000402434 PRPF38BQ5VTL8 546 aaKnown RBP22.05■■□□□ 1.12
RTN4-207ENST00000402434 PCNX4Q63HM2 1172 aa22.05■■□□□ 1.12
RTN4-207ENST00000402434 ZMYND12Q9H0C1 365 aa22.05■■□□□ 1.12
RTN4-207ENST00000402434 SLKQ9H2G2 1235 aaPredicted RBP22.05■■□□□ 1.12
RTN4-207ENST00000402434 DDX41Q9UJV9 622 aaKnown RBP22.05■■□□□ 1.12
RTN4-207ENST00000402434 PPFIA3O75145 1194 aa22.04■■□□□ 1.12
RTN4-207ENST00000402434 TGFB3P10600 412 aa22.04■■□□□ 1.12
RTN4-207ENST00000402434 ADCY7P51828 1080 aa22.04■■□□□ 1.12
RTN4-207ENST00000402434 ATN1P54259 1190 aaPredicted RBP22.04■■□□□ 1.12
RTN4-207ENST00000402434 CPLX2Q6PUV4 134 aaKnown RBP22.04■■□□□ 1.12
RTN4-207ENST00000402434 TRIM22Q8IYM9 498 aa22.04■■□□□ 1.12
RTN4-207ENST00000402434 INPP4AQ96PE3 977 aaPredicted RBP22.04■■□□□ 1.12
RTN4-207ENST00000402434 ELP1O95163 1332 aa22.03■■□□□ 1.12
RTN4-207ENST00000402434 SPDYE3A6NKU9 549 aa22.03■■□□□ 1.12
RTN4-207ENST00000402434 SSRP1Q08945 709 aaKnown RBP22.03■■□□□ 1.12
RTN4-207ENST00000402434 LY6KQ17RY6 165 aa22.03■■□□□ 1.12
RTN4-207ENST00000402434 KCNV1Q6PIU1 500 aa22.03■■□□□ 1.12
RTN4-207ENST00000402434 CCDC12Q8WUD4 166 aaPredicted RBP22.03■■□□□ 1.12
RTN4-207ENST00000402434 COPS5Q92905 334 aa22.03■■□□□ 1.12
RTN4-207ENST00000402434 PCDHA6Q9UN73 950 aa22.03■■□□□ 1.12
RTN4-207ENST00000402434 PCDHA8Q9Y5H6 950 aa22.03■■□□□ 1.12
RTN4-207ENST00000402434 FOSP01100 380 aaPredicted RBP22.03■■□□□ 1.12
RTN4-207ENST00000402434 CLK2P49760 499 aaKnown RBP22.03■■□□□ 1.12
RTN4-207ENST00000402434 ME3Q16798 604 aa22.03■■□□□ 1.12
RTN4-207ENST00000402434 OR6J1Q8NGC5 347 aa22.03■■□□□ 1.12
RTN4-207ENST00000402434 GLT1D1Q96MS3 346 aa22.03■■□□□ 1.12
RTN4-207ENST00000402434 MRVI1Q9Y6F6 885 aa22.03■■□□□ 1.12
RTN4-207ENST00000402434 A6NJR5 290 aa22.02■■□□□ 1.12
RTN4-207ENST00000402434 H0YGN5 161 aa22.02■■□□□ 1.12
RTN4-207ENST00000402434 ZEB2O60315 1214 aa22.02■■□□□ 1.12
RTN4-207ENST00000402434 DEXIO95424 95 aa22.02■■□□□ 1.12
RTN4-207ENST00000402434 ICAM3P32942 547 aa22.02■■□□□ 1.12
RTN4-207ENST00000402434 CPT1AP50416 773 aa22.02■■□□□ 1.12
RTN4-207ENST00000402434 ARHGAP1Q07960 439 aa22.02■■□□□ 1.12
RTN4-207ENST00000402434 EMID1Q96A84 441 aaPredicted RBP22.02■■□□□ 1.12
RTN4-207ENST00000402434 ZFP91Q96JP5 570 aaPredicted RBP22.02■■□□□ 1.12
RTN4-207ENST00000402434 STARD7Q9NQZ5 370 aa22.02■■□□□ 1.12
RTN4-207ENST00000402434 SH3GLB2Q9NR46 395 aa22.02■■□□□ 1.12
RTN4-207ENST00000402434 CABYRO75952 493 aa22.01■■□□□ 1.11
RTN4-207ENST00000402434 CDKL5O76039 1030 aa22.01■■□□□ 1.11
RTN4-207ENST00000402434 GH1P01241 217 aa22.01■■□□□ 1.11
RTN4-207ENST00000402434 RTP1P59025 263 aa22.01■■□□□ 1.11
RTN4-207ENST00000402434 GNPTABQ3T906 1256 aa22.01■■□□□ 1.11
RTN4-207ENST00000402434 CXCL17Q6UXB2 119 aa22.01■■□□□ 1.11
RTN4-207ENST00000402434 C7orf61Q8IZ16 206 aa22.01■■□□□ 1.11
RTN4-207ENST00000402434 UPF2Q9HAU5 1272 aaKnown RBP22.01■■□□□ 1.11
RTN4-207ENST00000402434 SPATA31C2B4DYI2 1134 aa22■■□□□ 1.11
RTN4-207ENST00000402434 GNA11P29992 359 aa22■■□□□ 1.11
RTN4-207ENST00000402434 AP3B2Q13367 1082 aa22■■□□□ 1.11
RTN4-207ENST00000402434 C6orf50Q9HD87 102 aa22■■□□□ 1.11
RTN4-207ENST00000402434 RTEL1Q9NZ71 1219 aa22■■□□□ 1.11
RTN4-207ENST00000402434 LARGE1O95461 756 aa21.99■■□□□ 1.11
RTN4-207ENST00000402434 CTDNEP1O95476 244 aa21.99■■□□□ 1.11
RTN4-207ENST00000402434 CDK7P50613 346 aa21.99■■□□□ 1.11
RTN4-207ENST00000402434 PURAQ00577 322 aaKnown RBP21.99■■□□□ 1.11
RTN4-207ENST00000402434 SP2Q02086 613 aa21.99■■□□□ 1.11
RTN4-207ENST00000402434 BRDTQ58F21 947 aaPredicted RBP21.99■■□□□ 1.11
RTN4-207ENST00000402434 FAM177A1Q8N128 213 aaPredicted RBP21.99■■□□□ 1.11
RTN4-207ENST00000402434 CCDC148Q8NFR7 591 aa21.99■■□□□ 1.11
RTN4-207ENST00000402434 GTF3C6Q969F1 213 aa21.99■■□□□ 1.11
RTN4-207ENST00000402434 EHMT1Q9H9B1 1298 aa21.99■■□□□ 1.11
RTN4-207ENST00000402434 POLR3EQ9NVU0 708 aa21.99■■□□□ 1.11
RTN4-207ENST00000402434 VPS54Q9P1Q0 977 aa21.99■■□□□ 1.11
RTN4-207ENST00000402434 FIBPO43427 364 aa21.98■■□□□ 1.11
RTN4-207ENST00000402434 KPNA6O60684 536 aa21.98■■□□□ 1.11
RTN4-207ENST00000402434 SEMA3FQ13275 785 aa21.98■■□□□ 1.11
RTN4-207ENST00000402434 LAMC2Q13753 1193 aa21.98■■□□□ 1.11
RTN4-207ENST00000402434 TRIM60Q495X7 471 aa21.98■■□□□ 1.11
RTN4-207ENST00000402434 MYSM1Q5VVJ2 828 aa21.98■■□□□ 1.11
RTN4-207ENST00000402434 MCTP2Q6DN12 878 aa21.98■■□□□ 1.11
RTN4-207ENST00000402434 ANKRD33Q7Z3H0 272 aa21.98■■□□□ 1.11
RTN4-207ENST00000402434 AFG1LQ8WV93 481 aa21.98■■□□□ 1.11
RTN4-207ENST00000402434 TMEM260Q9NX78 707 aa21.98■■□□□ 1.11
RTN4-207ENST00000402434 LIMCH1Q9UPQ0 1083 aa21.98■■□□□ 1.11
RTN4-207ENST00000402434 ATP11BQ9Y2G3 1177 aa21.98■■□□□ 1.11
RTN4-207ENST00000402434 UBIAD1Q9Y5Z9 338 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms