RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 LRRC27Q9C0I9 530 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 PANK4Q9NVE7 773 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 PCDHA1Q9Y5I3 950 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 MYH8P13535 1937 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 ANKRD36CQ5JPF3 1778 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 E9PMD0 336 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 MEIS1O00470 390 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 ZNF185O15231 689 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 KLRC4O43908 158 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 EIF4A3P38919 411 aaKnown RBP8.53□□□□□ -1.04
HDAC9-201ENST00000401921 PPP1R2P41236 205 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 NOP2P46087 812 aaKnown RBP8.53□□□□□ -1.04
HDAC9-201ENST00000401921 PRR16Q569H4 304 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 FAM26FQ5R3K3 315 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 IQCEQ6IPM2 695 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 RSRC2Q7L4I2 434 aaKnown RBP8.53□□□□□ -1.04
HDAC9-201ENST00000401921 GPBP1Q86WP2 473 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 CCDC65Q8IXS2 484 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 CCDC155Q8N6L0 562 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 TEKT1Q969V4 418 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 MOCS3O95396 460 aa8.52□□□□□ -1.05
HDAC9-201ENST00000401921 SRGNP10124 158 aa8.52□□□□□ -1.05
HDAC9-201ENST00000401921 CYP4A11Q02928 519 aa8.52□□□□□ -1.05
HDAC9-201ENST00000401921 CCDC84Q86UT8 332 aaPredicted RBP8.52□□□□□ -1.05
HDAC9-201ENST00000401921 SPAG5Q96R06 1193 aa8.52□□□□□ -1.05
HDAC9-201ENST00000401921 DUSP9Q99956 384 aaKnown RBP8.52□□□□□ -1.05
HDAC9-201ENST00000401921 NUDT12Q9BQG2 462 aa8.52□□□□□ -1.05
HDAC9-201ENST00000401921 LACRTQ9GZZ8 138 aa8.52□□□□□ -1.05
HDAC9-201ENST00000401921 MAGEF1Q9HAY2 307 aa8.52□□□□□ -1.05
HDAC9-201ENST00000401921 LUC7LQ9NQ29 371 aaKnown RBP8.52□□□□□ -1.05
HDAC9-201ENST00000401921 MYO1AQ9UBC5 1043 aa8.52□□□□□ -1.05
HDAC9-201ENST00000401921 DUOX1Q9NRD9 1551 aa8.52□□□□□ -1.05
HDAC9-201ENST00000401921 A0A1W2PQC6 194 aa8.52□□□□□ -1.05
HDAC9-201ENST00000401921 SPDYE3A6NKU9 549 aa8.52□□□□□ -1.05
HDAC9-201ENST00000401921 ZRANB2O95218 330 aaKnown RBP eCLIP8.52□□□□□ -1.05
HDAC9-201ENST00000401921 GDF11O95390 407 aa8.52□□□□□ -1.05
HDAC9-201ENST00000401921 POLR2FP61218 127 aaKnown RBP8.52□□□□□ -1.05
HDAC9-201ENST00000401921 RASSF7Q02833 373 aa8.52□□□□□ -1.05
HDAC9-201ENST00000401921 C2orf54Q08AI8 447 aa8.52□□□□□ -1.05
HDAC9-201ENST00000401921 VWA3BQ502W6 1294 aa8.52□□□□□ -1.05
HDAC9-201ENST00000401921 DCAF17Q5H9S7 520 aaPredicted RBP8.52□□□□□ -1.05
HDAC9-201ENST00000401921 ICE2Q659A1 982 aa8.52□□□□□ -1.05
HDAC9-201ENST00000401921 GSPT2Q8IYD1 628 aaKnown RBP8.52□□□□□ -1.05
HDAC9-201ENST00000401921 SPICE1Q8N0Z3 855 aa8.52□□□□□ -1.05
HDAC9-201ENST00000401921 MMS19Q96T76 1030 aa8.52□□□□□ -1.05
HDAC9-201ENST00000401921 NCAPGQ9BPX3 1015 aa8.52□□□□□ -1.05
HDAC9-201ENST00000401921 MLXIPQ9HAP2 919 aa8.52□□□□□ -1.05
HDAC9-201ENST00000401921 LRRC4BQ9NT99 713 aa8.52□□□□□ -1.05
HDAC9-201ENST00000401921 MKRN1Q9UHC7 482 aaKnown RBP8.52□□□□□ -1.05
HDAC9-201ENST00000401921 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.52□□□□□ -1.05
HDAC9-201ENST00000401921 PDS5AQ29RF7 1337 aaKnown RBP8.52□□□□□ -1.05
HDAC9-201ENST00000401921 PNMA6FA0A0J9YX94 578 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 ATP8B1O43520 1251 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 CHMP2AO43633 222 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 CLSTN1O94985 981 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 GYS1P13807 737 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 GRB10Q13322 594 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 CASP8Q14790 479 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 MAN2A1Q16706 1144 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 UNC13DQ70J99 1090 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 DAGLBQ8NCG7 672 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 ANKS1AQ92625 1134 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 C7orf25Q9BPX7 421 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 FUT8Q9BYC5 575 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 SEPT11Q9NVA2 429 aaKnown RBP8.51□□□□□ -1.05
HDAC9-201ENST00000401921 STK17AQ9UEE5 414 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 CICQ96RK0 1608 aaPredicted RBP8.51□□□□□ -1.05
HDAC9-201ENST00000401921 NPHP3-ACAD11A0A0J9YXS1 232 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 ARHGAP25P42331 645 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 RHBDL3P58872 404 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 PABPC4Q13310 644 aaKnown RBP eCLIP8.51□□□□□ -1.05
HDAC9-201ENST00000401921 ZYXQ15942 572 aaKnown RBP8.51□□□□□ -1.05
HDAC9-201ENST00000401921 CERKLQ49MI3 558 aaPredicted RBP8.51□□□□□ -1.05
HDAC9-201ENST00000401921 SLFN13Q68D06 897 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 KIAA0895Q8NCT3 520 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 LSM14BQ9BX40 385 aaKnown RBP8.51□□□□□ -1.05
HDAC9-201ENST00000401921 SEMA6BQ9H3T3 888 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 ANKZF1Q9H8Y5 726 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 FAN1Q9Y2M0 1017 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 POTEB3A0JP26 581 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 LRRC53A6NM62 1247 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 POTECB2RU33 542 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 STAT3P40763 770 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 KIF11P52732 1056 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 HERVK_113P62684 666 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 TUBB4BP68371 445 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 DNAJC21Q5F1R6 531 aaKnown RBP8.51□□□□□ -1.05
HDAC9-201ENST00000401921 POTEBQ6S5H4 581 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 TXLNBQ8N3L3 684 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 RETREG2Q8NC44 543 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 GLIS3Q8NEA6 775 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 RAD54LQ92698 747 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 GJD4Q96KN9 370 aaPredicted RBP8.51□□□□□ -1.05
HDAC9-201ENST00000401921 JMJD4Q9H9V9 463 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 DDX4Q9NQI0 724 aaKnown RBP8.51□□□□□ -1.05
HDAC9-201ENST00000401921 ADAM21Q9UKJ8 722 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 ROBO1Q9Y6N7 1651 aa8.51□□□□□ -1.05
HDAC9-201ENST00000401921 TMCO5BA8MYB1 307 aa8.5□□□□□ -1.05
HDAC9-201ENST00000401921 N4BP1O75113 896 aaKnown RBP8.5□□□□□ -1.05
HDAC9-201ENST00000401921 MCM3P25205 808 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 201.6 ms