RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 MOB2Q70IA6 237 aa28.83■■■□□ 2.21
CPNE1-205ENST00000401607 HOMER2Q9NSB8 354 aa28.83■■■□□ 2.21
CPNE1-205ENST00000401607 BLOC1S4Q9NUP1 217 aa28.83■■■□□ 2.21
CPNE1-205ENST00000401607 DACH1Q9UI36 760 aa28.83■■■□□ 2.21
CPNE1-205ENST00000401607 MSH4O15457 936 aa28.82■■■□□ 2.2
CPNE1-205ENST00000401607 MYL1P05976 194 aa28.82■■■□□ 2.2
CPNE1-205ENST00000401607 NF2P35240 595 aa28.82■■■□□ 2.2
CPNE1-205ENST00000401607 MYL5Q02045 173 aa28.82■■■□□ 2.2
CPNE1-205ENST00000401607 SPIRE1Q08AE8 756 aa28.82■■■□□ 2.2
CPNE1-205ENST00000401607 TMEM119Q4V9L6 283 aa28.82■■■□□ 2.2
CPNE1-205ENST00000401607 HSD3B7Q9H2F3 369 aa28.82■■■□□ 2.2
CPNE1-205ENST00000401607 RPTORQ8N122 1335 aa28.82■■■□□ 2.2
CPNE1-205ENST00000401607 RPN1P04843 607 aaKnown RBP28.81■■■□□ 2.2
CPNE1-205ENST00000401607 FAM20AQ96MK3 541 aa28.81■■■□□ 2.2
CPNE1-205ENST00000401607 TRIM5Q9C035 493 aa28.81■■■□□ 2.2
CPNE1-205ENST00000401607 ELP3Q9H9T3 547 aa28.81■■■□□ 2.2
CPNE1-205ENST00000401607 STK17AQ9UEE5 414 aa28.81■■■□□ 2.2
CPNE1-205ENST00000401607 FMR1Q06787 632 aaKnown RBP eCLIP28.8■■■□□ 2.27e-7■■■□□ 18.6
CPNE1-205ENST00000401607 ECM1Q16610 540 aa28.8■■■□□ 2.2
CPNE1-205ENST00000401607 CLMNQ96JQ2 1002 aa28.8■■■□□ 2.2
CPNE1-205ENST00000401607 TRERF1Q96PN7 1200 aa28.8■■■□□ 2.2
CPNE1-205ENST00000401607 CD44P16070 742 aaKnown RBP28.8■■■□□ 2.2
CPNE1-205ENST00000401607 OAZ1P54368 228 aa28.8■■■□□ 2.2
CPNE1-205ENST00000401607 HYIQ5T013 277 aa28.8■■■□□ 2.2
CPNE1-205ENST00000401607 ANKRD13AQ8IZ07 590 aa28.8■■■□□ 2.2
CPNE1-205ENST00000401607 CDK5RAP3Q96JB5 506 aa28.8■■■□□ 2.2
CPNE1-205ENST00000401607 ZNF214Q9UL59 606 aaPredicted RBP28.8■■■□□ 2.2
CPNE1-205ENST00000401607 RIPK3Q9Y572 518 aa28.8■■■□□ 2.2
CPNE1-205ENST00000401607 KLRC4O43908 158 aa28.79■■■□□ 2.2
CPNE1-205ENST00000401607 STAT3P40763 770 aa28.79■■■□□ 2.2
CPNE1-205ENST00000401607 SAMD3Q8N6K7 520 aa28.79■■■□□ 2.2
CPNE1-205ENST00000401607 SYTL5Q8TDW5 730 aaPredicted RBP28.79■■■□□ 2.2
CPNE1-205ENST00000401607 MED15Q96RN5 788 aa28.79■■■□□ 2.2
CPNE1-205ENST00000401607 MAP3K20Q9NYL2 800 aaKnown RBP28.79■■■□□ 2.2
CPNE1-205ENST00000401607 MYPNQ86TC9 1320 aa28.79■■■□□ 2.2
CPNE1-205ENST00000401607 LOC285556D6RIA3 1793 aa28.79■■■□□ 2.2
CPNE1-205ENST00000401607 SPDYE16A6NNV3 312 aaPredicted RBP28.78■■■□□ 2.2
CPNE1-205ENST00000401607 PPATQ06203 517 aa28.78■■■□□ 2.2
CPNE1-205ENST00000401607 HS1BP3Q53T59 392 aa28.78■■■□□ 2.2
CPNE1-205ENST00000401607 PNMA8AQ86V59 439 aaPredicted RBP28.78■■■□□ 2.2
CPNE1-205ENST00000401607 SMYD4Q8IYR2 804 aaPredicted RBP28.78■■■□□ 2.2
CPNE1-205ENST00000401607 RMND1Q9NWS8 449 aa28.78■■■□□ 2.2
CPNE1-205ENST00000401607 VAV3Q9UKW4 847 aa28.78■■■□□ 2.2
CPNE1-205ENST00000401607 TMEM132BQ14DG7 1078 aa28.78■■■□□ 2.2
CPNE1-205ENST00000401607 CT47A1Q5JQC4 288 aaPredicted RBP28.78■■■□□ 2.2
CPNE1-205ENST00000401607 TREML2Q5T2D2 321 aa28.78■■■□□ 2.2
CPNE1-205ENST00000401607 KCNK18Q7Z418 384 aa28.78■■■□□ 2.2
CPNE1-205ENST00000401607 C7orf25Q9BPX7 421 aa28.78■■■□□ 2.2
CPNE1-205ENST00000401607 TRIM9Q9C026 710 aa28.78■■■□□ 2.2
CPNE1-205ENST00000401607 RNF146Q9NTX7 359 aa28.78■■■□□ 2.2
CPNE1-205ENST00000401607 SPDYE5A6NIY4 337 aa28.77■■■□□ 2.2
CPNE1-205ENST00000401607 PPP1R3GB7ZBB8 358 aa28.77■■■□□ 2.2
CPNE1-205ENST00000401607 ATP2A1O14983 1001 aa28.77■■■□□ 2.2
CPNE1-205ENST00000401607 ERCC5P28715 1186 aaPredicted RBP28.77■■■□□ 2.2
CPNE1-205ENST00000401607 CCT6AP40227 531 aaKnown RBP28.77■■■□□ 2.2
CPNE1-205ENST00000401607 RPS6P62753 249 aaKnown RBP28.77■■■□□ 2.2
CPNE1-205ENST00000401607 TPM4P67936 248 aa28.77■■■□□ 2.2
CPNE1-205ENST00000401607 TTLL12Q14166 644 aaPredicted RBP28.77■■■□□ 2.2
CPNE1-205ENST00000401607 CEP55Q53EZ4 464 aa28.77■■■□□ 2.2
CPNE1-205ENST00000401607 SLC30A10Q6XR72 485 aa28.77■■■□□ 2.2
CPNE1-205ENST00000401607 ERO1BQ86YB8 467 aa28.77■■■□□ 2.2
CPNE1-205ENST00000401607 LARP4BQ92615 738 aaKnown RBP28.77■■■□□ 2.2
CPNE1-205ENST00000401607 RAD54LQ92698 747 aa28.77■■■□□ 2.2
CPNE1-205ENST00000401607 RABGAP1Q9Y3P9 1069 aa28.77■■■□□ 2.2
CPNE1-205ENST00000401607 FRMPD4Q14CM0 1322 aa28.77■■■□□ 2.2
CPNE1-205ENST00000401607 KDM3AQ9Y4C1 1321 aa28.77■■■□□ 2.2
CPNE1-205ENST00000401607 IRF6O14896 467 aa28.76■■■□□ 2.19
CPNE1-205ENST00000401607 SLC26A4O43511 780 aa28.76■■■□□ 2.19
CPNE1-205ENST00000401607 MCM6Q14566 821 aa28.76■■■□□ 2.19
CPNE1-205ENST00000401607 KCNB1Q14721 858 aa28.76■■■□□ 2.19
CPNE1-205ENST00000401607 ZNF658Q5TYW1 1059 aaPredicted RBP28.76■■■□□ 2.19
CPNE1-205ENST00000401607 SNRNP48Q6IEG0 339 aaKnown RBP28.76■■■□□ 2.19
CPNE1-205ENST00000401607 ENOX1Q8TC92 643 aaKnown RBP28.76■■■□□ 2.19
CPNE1-205ENST00000401607 OTUD5Q96G74 571 aa28.76■■■□□ 2.19
CPNE1-205ENST00000401607 ZFP91Q96JP5 570 aaPredicted RBP28.76■■■□□ 2.19
CPNE1-205ENST00000401607 HOXC10Q9NYD6 342 aa28.76■■■□□ 2.19
CPNE1-205ENST00000401607 KMT5BQ4FZB7 885 aa28.75■■■□□ 2.19
CPNE1-205ENST00000401607 TRMT44Q8IYL2 757 aaKnown RBP28.75■■■□□ 2.19
CPNE1-205ENST00000401607 IL31RAQ8NI17 732 aa28.75■■■□□ 2.19
CPNE1-205ENST00000401607 A0A0G2JLL6 359 aaPredicted RBP28.75■■■□□ 2.19
CPNE1-205ENST00000401607 MEIS1O00470 390 aa28.75■■■□□ 2.19
CPNE1-205ENST00000401607 POTEIP0CG38 1075 aa28.75■■■□□ 2.19
CPNE1-205ENST00000401607 POTEJP0CG39 1038 aa28.75■■■□□ 2.19
CPNE1-205ENST00000401607 NCAPH2Q6IBW4 605 aa28.75■■■□□ 2.19
CPNE1-205ENST00000401607 SV2BQ7L1I2 683 aa28.75■■■□□ 2.19
CPNE1-205ENST00000401607 ARHGAP30Q7Z6I6 1101 aaPredicted RBP28.75■■■□□ 2.19
CPNE1-205ENST00000401607 PRRT2Q7Z6L0 340 aaPredicted RBP28.75■■■□□ 2.19
CPNE1-205ENST00000401607 SLC5A5Q92911 643 aa28.75■■■□□ 2.19
CPNE1-205ENST00000401607 PTMAP06454 111 aaKnown RBP28.74■■■□□ 2.19
CPNE1-205ENST00000401607 AMPD3Q01432 767 aa28.74■■■□□ 2.19
CPNE1-205ENST00000401607 DHX8Q14562 1220 aaKnown RBP28.74■■■□□ 2.19
CPNE1-205ENST00000401607 RNF207Q6ZRF8 634 aa28.74■■■□□ 2.19
CPNE1-205ENST00000401607 MRFAP1L1Q96HT8 127 aa28.74■■■□□ 2.19
CPNE1-205ENST00000401607 TAAR1Q96RJ0 339 aa28.74■■■□□ 2.19
CPNE1-205ENST00000401607 NT5C3AQ9H0P0 336 aa28.74■■■□□ 2.19
CPNE1-205ENST00000401607 FANCLQ9NW38 375 aa28.74■■■□□ 2.19
CPNE1-205ENST00000401607 A0A0G2JMZ2 1700 aa28.73■■■□□ 2.19
CPNE1-205ENST00000401607 POTEB3A0JP26 581 aa28.73■■■□□ 2.19
CPNE1-205ENST00000401607 MED24O75448 989 aa28.73■■■□□ 2.19
CPNE1-205ENST00000401607 RHOBTB3O94955 611 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms