RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 C7orf31Q8N865 590 aa17.05■□□□□ 0.32
VAMP1-203ENST00000400911 RMDN3Q96TC7 470 aa17.05■□□□□ 0.32
VAMP1-203ENST00000400911 RAD9AQ99638 391 aa17.05■□□□□ 0.32
VAMP1-203ENST00000400911 SUGCTQ9HAC7 445 aa17.05■□□□□ 0.32
VAMP1-203ENST00000400911 LMCD1Q9NZU5 365 aa17.05■□□□□ 0.32
VAMP1-203ENST00000400911 HDAC6Q9UBN7 1215 aa17.05■□□□□ 0.32
VAMP1-203ENST00000400911 LCTP09848 1927 aa17.04■□□□□ 0.32
VAMP1-203ENST00000400911 GBF1Q92538 1859 aa17.04■□□□□ 0.32
VAMP1-203ENST00000400911 ABHD14A-ACY1A0A1B0GW23 586 aa17.04■□□□□ 0.32
VAMP1-203ENST00000400911 GJB5O95377 273 aa17.04■□□□□ 0.32
VAMP1-203ENST00000400911 PCP11498 1178 aaKnown RBP17.04■□□□□ 0.32
VAMP1-203ENST00000400911 FAM117BQ6P1L5 589 aa17.04■□□□□ 0.32
VAMP1-203ENST00000400911 ADGRF4Q8IZF3 695 aa17.04■□□□□ 0.32
VAMP1-203ENST00000400911 IWS1Q96ST2 819 aa17.04■□□□□ 0.32
VAMP1-203ENST00000400911 ALG1Q9BT22 464 aa17.04■□□□□ 0.32
VAMP1-203ENST00000400911 GTF2IRD1Q9UHL9 959 aa17.04■□□□□ 0.32
VAMP1-203ENST00000400911 DDX41Q9UJV9 622 aaKnown RBP17.04■□□□□ 0.32
VAMP1-203ENST00000400911 HCN4Q9Y3Q4 1203 aa17.04■□□□□ 0.32
VAMP1-203ENST00000400911 ABCB11O95342 1321 aa17.03■□□□□ 0.32
VAMP1-203ENST00000400911 ZMYM6O95789 1325 aa17.03■□□□□ 0.32
VAMP1-203ENST00000400911 PRRC2BQ5JSZ5 2229 aaKnown RBP17.03■□□□□ 0.32
VAMP1-203ENST00000400911 PARNO95453 639 aaKnown RBP17.03■□□□□ 0.32
VAMP1-203ENST00000400911 PSEN2P49810 448 aa17.03■□□□□ 0.32
VAMP1-203ENST00000400911 ERVK-21P61565 698 aa17.03■□□□□ 0.32
VAMP1-203ENST00000400911 RBL2Q08999 1139 aa17.03■□□□□ 0.32
VAMP1-203ENST00000400911 ARHGEF16Q5VV41 709 aa17.03■□□□□ 0.32
VAMP1-203ENST00000400911 DGKHQ86XP1 1220 aa17.03■□□□□ 0.32
VAMP1-203ENST00000400911 MCF2L2Q86YR7 1114 aa17.03■□□□□ 0.32
VAMP1-203ENST00000400911 ESR2Q92731 530 aa17.03■□□□□ 0.32
VAMP1-203ENST00000400911 TGS1Q96RS0 853 aaKnown RBP17.03■□□□□ 0.32
VAMP1-203ENST00000400911 RNF41Q9H4P4 317 aaPredicted RBP17.03■□□□□ 0.32
VAMP1-203ENST00000400911 CD320Q9NPF0 282 aa17.03■□□□□ 0.32
VAMP1-203ENST00000400911 NEDD4P46934 1319 aa17.02■□□□□ 0.32
VAMP1-203ENST00000400911 CCDC171Q6TFL3 1326 aa17.02■□□□□ 0.32
VAMP1-203ENST00000400911 LINC01553A4QN01 128 aa17.02■□□□□ 0.32
VAMP1-203ENST00000400911 FAM86C2PA6NEL3 165 aa17.02■□□□□ 0.32
VAMP1-203ENST00000400911 EIF3JO75822 258 aaKnown RBP17.02■□□□□ 0.32
VAMP1-203ENST00000400911 ZNF286BP0CG31 522 aa17.02■□□□□ 0.32
VAMP1-203ENST00000400911 EIF2AK2P19525 551 aaKnown RBP17.02■□□□□ 0.32
VAMP1-203ENST00000400911 HOXD11P31277 338 aaPredicted RBP17.02■□□□□ 0.32
VAMP1-203ENST00000400911 ZNF200P98182 395 aaPredicted RBP17.02■□□□□ 0.32
VAMP1-203ENST00000400911 IKBKEQ14164 716 aa17.02■□□□□ 0.32
VAMP1-203ENST00000400911 MFSD10Q14728 455 aa17.02■□□□□ 0.32
VAMP1-203ENST00000400911 KIAA0753Q2KHM9 967 aa17.02■□□□□ 0.32
VAMP1-203ENST00000400911 ZNF618Q5T7W0 954 aa17.02■□□□□ 0.32
VAMP1-203ENST00000400911 TRAF7Q6Q0C0 670 aa17.02■□□□□ 0.32
VAMP1-203ENST00000400911 PNMA1Q8ND90 353 aa17.02■□□□□ 0.32
VAMP1-203ENST00000400911 WNT8BQ93098 351 aa17.02■□□□□ 0.32
VAMP1-203ENST00000400911 EMID1Q96A84 441 aaPredicted RBP17.02■□□□□ 0.32
VAMP1-203ENST00000400911 MAF1Q9H063 256 aa17.02■□□□□ 0.32
VAMP1-203ENST00000400911 VAT1LQ9HCJ6 419 aa17.02■□□□□ 0.32
VAMP1-203ENST00000400911 C11orf16Q9NQ32 467 aa17.02■□□□□ 0.32
VAMP1-203ENST00000400911 ARIH1Q9Y4X5 557 aaPredicted RBP17.02■□□□□ 0.32
VAMP1-203ENST00000400911 SCN10AQ9Y5Y9 1956 aa17.02■□□□□ 0.31
VAMP1-203ENST00000400911 TCF20Q9UGU0 1960 aaKnown RBP17.01■□□□□ 0.31
VAMP1-203ENST00000400911 TRIM6-TRIM34B2RNG4 842 aa17.01■□□□□ 0.31
VAMP1-203ENST00000400911 GPR37L1O60883 481 aa17.01■□□□□ 0.31
VAMP1-203ENST00000400911 PTK7Q13308 1070 aa17.01■□□□□ 0.31
VAMP1-203ENST00000400911 LAMC2Q13753 1193 aa17.01■□□□□ 0.31
VAMP1-203ENST00000400911 MBTPS1Q14703 1052 aa17.01■□□□□ 0.31
VAMP1-203ENST00000400911 TRIM71Q2Q1W2 868 aaKnown RBP17.01■□□□□ 0.31
VAMP1-203ENST00000400911 TICAM2Q86XR7 235 aa17.01■□□□□ 0.31
VAMP1-203ENST00000400911 CRBNQ96SW2 442 aa17.01■□□□□ 0.31
VAMP1-203ENST00000400911 KATNAL1Q9BW62 490 aa17.01■□□□□ 0.31
VAMP1-203ENST00000400911 UBE2ZQ9H832 354 aaPredicted RBP17.01■□□□□ 0.31
VAMP1-203ENST00000400911 KAT14Q9H8E8 782 aa17.01■□□□□ 0.31
VAMP1-203ENST00000400911 MRPL11Q9Y3B7 192 aaKnown RBP17.01■□□□□ 0.31
VAMP1-203ENST00000400911 MRVI1Q9Y6F6 885 aa17.01■□□□□ 0.31
VAMP1-203ENST00000400911 SCN5AQ14524 2016 aa17.01■□□□□ 0.31
VAMP1-203ENST00000400911 NCOR1O75376 2440 aa17■□□□□ 0.31
VAMP1-203ENST00000400911 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17■□□□□ 0.31
VAMP1-203ENST00000400911 PI4K2BG5E9Z4 385 aa17■□□□□ 0.31
VAMP1-203ENST00000400911 HAS3O00219 553 aa17■□□□□ 0.31
VAMP1-203ENST00000400911 ZNF213O14771 459 aa17■□□□□ 0.31
VAMP1-203ENST00000400911 DHX16O60231 1041 aaKnown RBP17■□□□□ 0.31
VAMP1-203ENST00000400911 SORBS3O60504 671 aa17■□□□□ 0.31
VAMP1-203ENST00000400911 EFCAB14O75071 495 aa17■□□□□ 0.31
VAMP1-203ENST00000400911 KDM4AO75164 1064 aa17■□□□□ 0.31
VAMP1-203ENST00000400911 F2P00734 622 aa17■□□□□ 0.31
VAMP1-203ENST00000400911 NR3C2P08235 984 aa17■□□□□ 0.31
VAMP1-203ENST00000400911 HIC1Q14526 733 aa17■□□□□ 0.31
VAMP1-203ENST00000400911 QRICH1Q2TAL8 776 aa17■□□□□ 0.31
VAMP1-203ENST00000400911 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17■□□□□ 0.31
VAMP1-203ENST00000400911 IQCA1Q86XH1 822 aa17■□□□□ 0.31
VAMP1-203ENST00000400911 FBXO11Q86XK2 927 aa17■□□□□ 0.31
VAMP1-203ENST00000400911 DHX37Q8IY37 1157 aaKnown RBP17■□□□□ 0.31
VAMP1-203ENST00000400911 PPTC7Q8NI37 304 aa17■□□□□ 0.31
VAMP1-203ENST00000400911 RILPL2Q969X0 211 aa17■□□□□ 0.31
VAMP1-203ENST00000400911 JMJD4Q9H9V9 463 aa17■□□□□ 0.31
VAMP1-203ENST00000400911 PXMP2Q9NR77 195 aa17■□□□□ 0.31
VAMP1-203ENST00000400911 CFBP00751 764 aa16.99■□□□□ 0.31
VAMP1-203ENST00000400911 ANKS1AQ92625 1134 aa16.99■□□□□ 0.31
VAMP1-203ENST00000400911 ZSCAN10Q96SZ4 725 aaPredicted RBP16.99■□□□□ 0.31
VAMP1-203ENST00000400911 C17orf80Q9BSJ5 609 aa16.99■□□□□ 0.31
VAMP1-203ENST00000400911 INSL6Q9Y581 213 aa16.99■□□□□ 0.31
VAMP1-203ENST00000400911 B4E1Z4 1266 aa16.98■□□□□ 0.31
VAMP1-203ENST00000400911 PPFIA4O75335 1185 aa16.98■□□□□ 0.31
VAMP1-203ENST00000400911 LGR5O75473 907 aa16.98■□□□□ 0.31
VAMP1-203ENST00000400911 PARP1P09874 1014 aaKnown RBP16.98■□□□□ 0.31
VAMP1-203ENST00000400911 SDSP20132 328 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms