RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 SDSP20132 328 aa13.95□□□□□ -0.18
LINC00544-201ENST00000400540 POU3F3P20264 500 aaPredicted RBP13.95□□□□□ -0.18
LINC00544-201ENST00000400540 WDR5P61964 334 aaKnown RBP13.95□□□□□ -0.18
LINC00544-201ENST00000400540 DEFB103AP81534 67 aa13.95□□□□□ -0.18
LINC00544-201ENST00000400540 QRICH1Q2TAL8 776 aa13.95□□□□□ -0.18
LINC00544-201ENST00000400540 DGKHQ86XP1 1220 aa13.95□□□□□ -0.18
LINC00544-201ENST00000400540 RGS22Q8NE09 1264 aa13.95□□□□□ -0.18
LINC00544-201ENST00000400540 RNF41Q9H4P4 317 aaPredicted RBP13.95□□□□□ -0.18
LINC00544-201ENST00000400540 BAZ2BQ9UIF8 2168 aaKnown RBP13.95□□□□□ -0.18
LINC00544-201ENST00000400540 B4DLN1 442 aa13.94□□□□□ -0.18
LINC00544-201ENST00000400540 ZNF213O14771 459 aa13.94□□□□□ -0.18
LINC00544-201ENST00000400540 TLL1O43897 1013 aa13.94□□□□□ -0.18
LINC00544-201ENST00000400540 LPXNO60711 386 aa13.94□□□□□ -0.18
LINC00544-201ENST00000400540 BAIAP3O94812 1187 aa13.94□□□□□ -0.18
LINC00544-201ENST00000400540 MRPL12P52815 198 aaKnown RBP13.94□□□□□ -0.18
LINC00544-201ENST00000400540 GRB10Q13322 594 aa13.94□□□□□ -0.18
LINC00544-201ENST00000400540 B4GALNT3Q6L9W6 998 aa13.94□□□□□ -0.18
LINC00544-201ENST00000400540 LRRC8DQ7L1W4 858 aa13.94□□□□□ -0.18
LINC00544-201ENST00000400540 SESTD1Q86VW0 696 aa13.94□□□□□ -0.18
LINC00544-201ENST00000400540 ENAHQ8N8S7 591 aaPredicted RBP13.94□□□□□ -0.18
LINC00544-201ENST00000400540 CAGE1Q8TC20 777 aa13.94□□□□□ -0.18
LINC00544-201ENST00000400540 NSUN6Q8TEA1 469 aaKnown RBP13.94□□□□□ -0.18
LINC00544-201ENST00000400540 AFAP1L1Q8TED9 768 aa13.94□□□□□ -0.18
LINC00544-201ENST00000400540 GDPD5Q8WTR4 605 aa13.94□□□□□ -0.18
LINC00544-201ENST00000400540 RMDN3Q96TC7 470 aa13.94□□□□□ -0.18
LINC00544-201ENST00000400540 KAT14Q9H8E8 782 aa13.94□□□□□ -0.18
LINC00544-201ENST00000400540 BRWD1Q9NSI6 2320 aa13.94□□□□□ -0.18
LINC00544-201ENST00000400540 HDAC6Q9UBN7 1215 aa13.94□□□□□ -0.18
LINC00544-201ENST00000400540 SORBS3O60504 671 aa13.93□□□□□ -0.18
LINC00544-201ENST00000400540 NBNO60934 754 aa13.93□□□□□ -0.18
LINC00544-201ENST00000400540 ZNF286BP0CG31 522 aa13.93□□□□□ -0.18
LINC00544-201ENST00000400540 SELPP16109 830 aa13.93□□□□□ -0.18
LINC00544-201ENST00000400540 KCNJ6P48051 423 aa13.93□□□□□ -0.18
LINC00544-201ENST00000400540 STXBP2Q15833 593 aa13.93□□□□□ -0.18
LINC00544-201ENST00000400540 CWC27Q6UX04 472 aaKnown RBP13.93□□□□□ -0.18
LINC00544-201ENST00000400540 TICAM2Q86XR7 235 aa13.93□□□□□ -0.18
LINC00544-201ENST00000400540 CCDC155Q8N6L0 562 aa13.93□□□□□ -0.18
LINC00544-201ENST00000400540 WNT8BQ93098 351 aa13.93□□□□□ -0.18
LINC00544-201ENST00000400540 ALG1Q9BT22 464 aa13.93□□□□□ -0.18
LINC00544-201ENST00000400540 JMJD4Q9H9V9 463 aa13.93□□□□□ -0.18
LINC00544-201ENST00000400540 VAT1LQ9HCJ6 419 aa13.93□□□□□ -0.18
LINC00544-201ENST00000400540 GTF2IRD1Q9UHL9 959 aa13.93□□□□□ -0.18
LINC00544-201ENST00000400540 DDX41Q9UJV9 622 aaKnown RBP13.93□□□□□ -0.18
LINC00544-201ENST00000400540 C5orf42Q9H799 3197 aa13.93□□□□□ -0.18
LINC00544-201ENST00000400540 KIF28PB7ZC32 967 aa13.92□□□□□ -0.18
LINC00544-201ENST00000400540 OPLAHO14841 1288 aa13.92□□□□□ -0.18
LINC00544-201ENST00000400540 DHX16O60231 1041 aaKnown RBP13.92□□□□□ -0.18
LINC00544-201ENST00000400540 CKBP12277 381 aa13.92□□□□□ -0.18
LINC00544-201ENST00000400540 PSEN2P49810 448 aa13.92□□□□□ -0.18
LINC00544-201ENST00000400540 MFAP1P55081 439 aaKnown RBP13.92□□□□□ -0.18
LINC00544-201ENST00000400540 ZNF200P98182 395 aaPredicted RBP13.92□□□□□ -0.18
LINC00544-201ENST00000400540 HIC1Q14526 733 aa13.92□□□□□ -0.18
LINC00544-201ENST00000400540 DGKDQ16760 1214 aa13.92□□□□□ -0.18
LINC00544-201ENST00000400540 ASPRV1Q53RT3 343 aa13.92□□□□□ -0.18
LINC00544-201ENST00000400540 ARHGEF16Q5VV41 709 aa13.92□□□□□ -0.18
LINC00544-201ENST00000400540 CNKSR3Q6P9H4 555 aa13.92□□□□□ -0.18
LINC00544-201ENST00000400540 IQCA1Q86XH1 822 aa13.92□□□□□ -0.18
LINC00544-201ENST00000400540 FBXO11Q86XK2 927 aa13.92□□□□□ -0.18
LINC00544-201ENST00000400540 STAG2Q8N3U4 1231 aa13.92□□□□□ -0.18
LINC00544-201ENST00000400540 ANKS1AQ92625 1134 aa13.92□□□□□ -0.18
LINC00544-201ENST00000400540 ZSCAN10Q96SZ4 725 aaPredicted RBP13.92□□□□□ -0.18
LINC00544-201ENST00000400540 PXMP2Q9NR77 195 aa13.92□□□□□ -0.18
LINC00544-201ENST00000400540 MTUS1Q9ULD2 1270 aa13.92□□□□□ -0.18
LINC00544-201ENST00000400540 RALGAPA2Q2PPJ7 1873 aa13.92□□□□□ -0.18
LINC00544-201ENST00000400540 PPP1R11O60927 126 aaPredicted RBP13.91□□□□□ -0.18
LINC00544-201ENST00000400540 F2P00734 622 aa13.91□□□□□ -0.18
LINC00544-201ENST00000400540 CFBP00751 764 aa13.91□□□□□ -0.18
LINC00544-201ENST00000400540 CXCL10P02778 98 aa13.91□□□□□ -0.18
LINC00544-201ENST00000400540 PARP1P09874 1014 aaKnown RBP13.91□□□□□ -0.18
LINC00544-201ENST00000400540 CASTP20810 708 aaKnown RBP13.91□□□□□ -0.18
LINC00544-201ENST00000400540 RBL2Q08999 1139 aa13.91□□□□□ -0.18
LINC00544-201ENST00000400540 MBTPS1Q14703 1052 aa13.91□□□□□ -0.18
LINC00544-201ENST00000400540 MFSD10Q14728 455 aa13.91□□□□□ -0.18
LINC00544-201ENST00000400540 KIAA0753Q2KHM9 967 aa13.91□□□□□ -0.18
LINC00544-201ENST00000400540 AAK1Q2M2I8 961 aa13.91□□□□□ -0.18
LINC00544-201ENST00000400540 TRAF7Q6Q0C0 670 aa13.91□□□□□ -0.18
LINC00544-201ENST00000400540 MCF2L2Q86YR7 1114 aa13.91□□□□□ -0.18
LINC00544-201ENST00000400540 PLEKHM2Q8IWE5 1019 aa13.91□□□□□ -0.18
LINC00544-201ENST00000400540 C7orf31Q8N865 590 aa13.91□□□□□ -0.18
LINC00544-201ENST00000400540 IWS1Q96ST2 819 aa13.91□□□□□ -0.18
LINC00544-201ENST00000400540 IL25Q9H293 177 aa13.91□□□□□ -0.18
LINC00544-201ENST00000400540 ZSWIM5Q9P217 1185 aa13.91□□□□□ -0.18
LINC00544-201ENST00000400540 MRPL11Q9Y3B7 192 aaKnown RBP13.91□□□□□ -0.18
LINC00544-201ENST00000400540 MRVI1Q9Y6F6 885 aa13.91□□□□□ -0.18
LINC00544-201ENST00000400540 HAS3O00219 553 aa13.9□□□□□ -0.18
LINC00544-201ENST00000400540 RGS20O76081 388 aa13.9□□□□□ -0.18
LINC00544-201ENST00000400540 NR3C2P08235 984 aa13.9□□□□□ -0.18
LINC00544-201ENST00000400540 TRIM71Q2Q1W2 868 aaKnown RBP13.9□□□□□ -0.18
LINC00544-201ENST00000400540 ZNF618Q5T7W0 954 aa13.9□□□□□ -0.18
LINC00544-201ENST00000400540 FAM117BQ6P1L5 589 aa13.9□□□□□ -0.18
LINC00544-201ENST00000400540 SMC5Q8IY18 1101 aa13.9□□□□□ -0.18
LINC00544-201ENST00000400540 IL31RAQ8NI17 732 aa13.9□□□□□ -0.18
LINC00544-201ENST00000400540 PPTC7Q8NI37 304 aa13.9□□□□□ -0.18
LINC00544-201ENST00000400540 EMID1Q96A84 441 aaPredicted RBP13.9□□□□□ -0.18
LINC00544-201ENST00000400540 ZFP91Q96JP5 570 aaPredicted RBP13.9□□□□□ -0.18
LINC00544-201ENST00000400540 ZBED2Q9BTP6 218 aa13.9□□□□□ -0.18
LINC00544-201ENST00000400540 DIAPH3Q9NSV4 1193 aa13.9□□□□□ -0.18
LINC00544-201ENST00000400540 COG5Q9UP83 839 aa13.9□□□□□ -0.18
LINC00544-201ENST00000400540 EIF3JO75822 258 aaKnown RBP13.89□□□□□ -0.19
LINC00544-201ENST00000400540 GJB5O95377 273 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms