RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 MOXD2PA6NHM9 499 aa8.6□□□□□ -1.03
USP16-204ENST00000399976 SPATA31C2B4DYI2 1134 aa8.6□□□□□ -1.03
USP16-204ENST00000399976 ARHGEF16Q5VV41 709 aa8.6□□□□□ -1.03
USP16-204ENST00000399976 ATL3Q6DD88 541 aa8.6□□□□□ -1.03
USP16-204ENST00000399976 KLHDC9Q8NEP7 349 aa8.6□□□□□ -1.03
USP16-204ENST00000399976 CPVLQ9H3G5 476 aa8.6□□□□□ -1.03
USP16-204ENST00000399976 VAT1LQ9HCJ6 419 aa8.6□□□□□ -1.03
USP16-204ENST00000399976 JADE2Q9NQC1 790 aa8.6□□□□□ -1.03
USP16-204ENST00000399976 ISY1Q9ULR0 285 aaKnown RBP8.6□□□□□ -1.03
USP16-204ENST00000399976 LAD1O00515 517 aa8.6□□□□□ -1.03
USP16-204ENST00000399976 TTLL4Q14679 1199 aa8.6□□□□□ -1.03
USP16-204ENST00000399976 NSMFQ6X4W1 530 aa8.6□□□□□ -1.03
USP16-204ENST00000399976 BRAPQ7Z569 592 aa8.6□□□□□ -1.03
USP16-204ENST00000399976 CCDC144CPQ8IYA2 1237 aa8.6□□□□□ -1.03
USP16-204ENST00000399976 PHKBQ93100 1093 aa8.6□□□□□ -1.03
USP16-204ENST00000399976 SHISA4Q96DD7 197 aa8.6□□□□□ -1.03
USP16-204ENST00000399976 PPME1Q9Y570 386 aa8.6□□□□□ -1.03
USP16-204ENST00000399976 DNM1LO00429 736 aa8.59□□□□□ -1.03
USP16-204ENST00000399976 MEIS1O00470 390 aa8.59□□□□□ -1.03
USP16-204ENST00000399976 RPLP2P05387 115 aaKnown RBP8.59□□□□□ -1.03
USP16-204ENST00000399976 CCL5P13501 91 aa8.59□□□□□ -1.03
USP16-204ENST00000399976 PRKAR2AP13861 404 aaKnown RBP8.59□□□□□ -1.03
USP16-204ENST00000399976 CYP2B6P20813 491 aa8.59□□□□□ -1.03
USP16-204ENST00000399976 MUTP22033 750 aa8.59□□□□□ -1.03
USP16-204ENST00000399976 BECN1Q14457 450 aa8.59□□□□□ -1.03
USP16-204ENST00000399976 SAFBQ15424 915 aaKnown RBP eCLIP8.59□□□□□ -1.03
USP16-204ENST00000399976 LHX8Q68G74 356 aa8.59□□□□□ -1.03
USP16-204ENST00000399976 SESTD1Q86VW0 696 aa8.59□□□□□ -1.03
USP16-204ENST00000399976 ARRDC4Q8NCT1 418 aa8.59□□□□□ -1.03
USP16-204ENST00000399976 TAAR1Q96RJ0 339 aa8.59□□□□□ -1.03
USP16-204ENST00000399976 MXRA8Q9BRK3 442 aa8.59□□□□□ -1.03
USP16-204ENST00000399976 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.59□□□□□ -1.03
USP16-204ENST00000399976 TSKSQ9UJT2 592 aa8.59□□□□□ -1.03
USP16-204ENST00000399976 PHF24Q9UPV7 400 aa8.59□□□□□ -1.03
USP16-204ENST00000399976 DOCK5Q9H7D0 1870 aa8.59□□□□□ -1.03
USP16-204ENST00000399976 SGPL1O95470 568 aa8.59□□□□□ -1.03
USP16-204ENST00000399976 BMP15O95972 392 aa8.59□□□□□ -1.03
USP16-204ENST00000399976 CFBP00751 764 aa8.59□□□□□ -1.03
USP16-204ENST00000399976 NLRP5P59047 1200 aa8.59□□□□□ -1.03
USP16-204ENST00000399976 NEDD9Q14511 834 aa8.59□□□□□ -1.03
USP16-204ENST00000399976 SNX17Q15036 470 aa8.59□□□□□ -1.03
USP16-204ENST00000399976 NONOQ15233 471 aaKnown RBP eCLIP8.59□□□□□ -1.03
USP16-204ENST00000399976 CCSAPQ6IQ19 270 aaPredicted RBP8.59□□□□□ -1.03
USP16-204ENST00000399976 CCDC83Q8IWF9 413 aa8.59□□□□□ -1.03
USP16-204ENST00000399976 TRPV1Q8NER1 839 aa8.59□□□□□ -1.03
USP16-204ENST00000399976 RIT2Q99578 217 aa8.59□□□□□ -1.03
USP16-204ENST00000399976 MTMR7Q9Y216 660 aa8.59□□□□□ -1.03
USP16-204ENST00000399976 IGLV3-22A0A075B6J6 115 aa8.58□□□□□ -1.04
USP16-204ENST00000399976 ZEB2O60315 1214 aa8.58□□□□□ -1.04
USP16-204ENST00000399976 ADAMTS4O75173 837 aa8.58□□□□□ -1.04
USP16-204ENST00000399976 CD2BP2O95400 341 aaKnown RBP8.58□□□□□ -1.04
USP16-204ENST00000399976 COL6A1P12109 1028 aa8.58□□□□□ -1.04
USP16-204ENST00000399976 CNTN2Q02246 1040 aa8.58□□□□□ -1.04
USP16-204ENST00000399976 LAMC2Q13753 1193 aa8.58□□□□□ -1.04
USP16-204ENST00000399976 PCSK9Q8NBP7 692 aaKnown RBP8.58□□□□□ -1.04
USP16-204ENST00000399976 GPKOWQ92917 476 aaPredicted RBP eCLIP8.58□□□□□ -1.047e-6■■■■■ 33.4
USP16-204ENST00000399976 ABHD8Q96I13 439 aa8.58□□□□□ -1.04
USP16-204ENST00000399976 C8orf76Q96K31 380 aa8.58□□□□□ -1.04
USP16-204ENST00000399976 POLR3EQ9NVU0 708 aa8.58□□□□□ -1.04
USP16-204ENST00000399976 EMSYQ7Z589 1322 aa8.58□□□□□ -1.04
USP16-204ENST00000399976 A6NJR5 290 aa8.58□□□□□ -1.04
USP16-204ENST00000399976 PGK2P07205 417 aa8.58□□□□□ -1.04
USP16-204ENST00000399976 SNAP25P60880 206 aa8.58□□□□□ -1.04
USP16-204ENST00000399976 MRPS9P82933 396 aaKnown RBP8.58□□□□□ -1.04
USP16-204ENST00000399976 ARHGAP4P98171 946 aa8.58□□□□□ -1.04
USP16-204ENST00000399976 KRT40Q6A162 431 aa8.58□□□□□ -1.04
USP16-204ENST00000399976 FAM20AQ96MK3 541 aa8.58□□□□□ -1.04
USP16-204ENST00000399976 TBC1D22BQ9NU19 505 aa8.58□□□□□ -1.04
USP16-204ENST00000399976 DDX41Q9UJV9 622 aaKnown RBP8.58□□□□□ -1.04
USP16-204ENST00000399976 SMC3Q9UQE7 1217 aa8.58□□□□□ -1.04
USP16-204ENST00000399976 MYH9P35579 1960 aaKnown RBP8.58□□□□□ -1.04
USP16-204ENST00000399976 ELP1O95163 1332 aa8.58□□□□□ -1.04
USP16-204ENST00000399976 ATG7O95352 703 aa8.58□□□□□ -1.04
USP16-204ENST00000399976 GH1P01241 217 aa8.58□□□□□ -1.04
USP16-204ENST00000399976 RARBP10826 455 aa8.58□□□□□ -1.04
USP16-204ENST00000399976 PRPHP41219 470 aa8.58□□□□□ -1.04
USP16-204ENST00000399976 CPT1AP50416 773 aa8.58□□□□□ -1.04
USP16-204ENST00000399976 SLC26A2P50443 739 aa8.58□□□□□ -1.04
USP16-204ENST00000399976 CCL14Q16627 93 aa8.58□□□□□ -1.04
USP16-204ENST00000399976 CEP55Q53EZ4 464 aa8.58□□□□□ -1.04
USP16-204ENST00000399976 B3GNT9Q6UX72 402 aa8.58□□□□□ -1.04
USP16-204ENST00000399976 FAM184AQ8NB25 1140 aa8.58□□□□□ -1.04
USP16-204ENST00000399976 PPTC7Q8NI37 304 aa8.58□□□□□ -1.04
USP16-204ENST00000399976 ZSCAN16Q9H4T2 348 aaPredicted RBP8.58□□□□□ -1.04
USP16-204ENST00000399976 HOMER2Q9NSB8 354 aa8.58□□□□□ -1.04
USP16-204ENST00000399976 VPS54Q9P1Q0 977 aa8.58□□□□□ -1.04
USP16-204ENST00000399976 NAP1L2Q9ULW6 460 aaPredicted RBP8.58□□□□□ -1.04
USP16-204ENST00000399976 STK3Q13188 491 aa8.57□□□□□ -1.04
USP16-204ENST00000399976 WDR78Q5VTH9 848 aa8.57□□□□□ -1.04
USP16-204ENST00000399976 SMAP1Q8IYB5 467 aaPredicted RBP8.57□□□□□ -1.04
USP16-204ENST00000399976 CMTR1Q8N1G2 835 aaKnown RBP8.57□□□□□ -1.04
USP16-204ENST00000399976 ZNF710Q8N1W2 664 aa8.57□□□□□ -1.04
USP16-204ENST00000399976 NECAB1Q8N987 351 aa8.57□□□□□ -1.04
USP16-204ENST00000399976 SLC43A3Q8NBI5 491 aa8.57□□□□□ -1.04
USP16-204ENST00000399976 SLC5A5Q92911 643 aa8.57□□□□□ -1.04
USP16-204ENST00000399976 TMEM106CQ9BVX2 250 aa8.57□□□□□ -1.04
USP16-204ENST00000399976 SPC25Q9HBM1 224 aa8.57□□□□□ -1.04
USP16-204ENST00000399976 IGKV6D-21A0A0A0MT36 114 aa8.57□□□□□ -1.04
USP16-204ENST00000399976 PEX10O60683 326 aa8.57□□□□□ -1.04
USP16-204ENST00000399976 RGS20O76081 388 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms