RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 MTMR1Q13613 665 aa8.71□□□□□ -1.02
USP47-203ENST00000399455 CASC4Q6P4E1 433 aa8.71□□□□□ -1.02
USP47-203ENST00000399455 NOSTRINQ8IVI9 506 aa8.71□□□□□ -1.02
USP47-203ENST00000399455 PGBD4Q96DM1 585 aa8.71□□□□□ -1.02
USP47-203ENST00000399455 LRRC4Q9HBW1 653 aa8.71□□□□□ -1.02
USP47-203ENST00000399455 GGA3Q9NZ52 723 aa8.71□□□□□ -1.02
USP47-203ENST00000399455 IGSF3O75054 1194 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 LDHAP00338 332 aaKnown RBP8.7□□□□□ -1.02
USP47-203ENST00000399455 ANGEL2Q5VTE6 544 aaKnown RBP8.7□□□□□ -1.02
USP47-203ENST00000399455 RCSD1Q6JBY9 416 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 ERO1AQ96HE7 468 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 SEPT10Q9P0V9 454 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 UTP11Q9Y3A2 253 aaKnown RBP8.7□□□□□ -1.02
USP47-203ENST00000399455 FARP1Q9Y4F1 1045 aaPredicted RBP8.7□□□□□ -1.02
USP47-203ENST00000399455 FGAP02671 866 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 EIF2AK2P19525 551 aaKnown RBP8.7□□□□□ -1.02
USP47-203ENST00000399455 GMPSP49915 693 aaPredicted RBP8.7□□□□□ -1.02
USP47-203ENST00000399455 DIXDC1Q155Q3 683 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 CC2D1AQ6P1N0 951 aaPredicted RBP8.7□□□□□ -1.02
USP47-203ENST00000399455 CFAP57Q96MR6 1250 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 SMC6Q96SB8 1091 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 LSM14BQ9BX40 385 aaKnown RBP8.7□□□□□ -1.02
USP47-203ENST00000399455 MYOZ2Q9NPC6 264 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 SH3GLB2Q9NR46 395 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 PREX1Q8TCU6 1659 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 EIF3CLB5ME19 914 aaKnown RBP8.7□□□□□ -1.02
USP47-203ENST00000399455 PER1O15534 1290 aaPredicted RBP8.7□□□□□ -1.02
USP47-203ENST00000399455 ACTN4O43707 911 aaKnown RBP8.7□□□□□ -1.02
USP47-203ENST00000399455 RECQLP46063 649 aaPredicted RBP8.7□□□□□ -1.02
USP47-203ENST00000399455 LRMPQ12912 555 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 NFX1Q12986 1120 aaKnown RBP8.7□□□□□ -1.02
USP47-203ENST00000399455 ARHGAP44Q17R89 818 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 AGBL3Q8NEM8 1001 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 NLRP4Q96MN2 994 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 PIGSQ96S52 555 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 RMDN3Q96TC7 470 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 EIF3CQ99613 913 aaKnown RBP8.7□□□□□ -1.02
USP47-203ENST00000399455 TRIM56Q9BRZ2 755 aaKnown RBP8.7□□□□□ -1.02
USP47-203ENST00000399455 DNAJC25Q9H1X3 360 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 RNF146Q9NTX7 359 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 TBC1D22BQ9NU19 505 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.7□□□□□ -1.02
USP47-203ENST00000399455 V9GYY5 206 aaPredicted RBP8.7□□□□□ -1.02
USP47-203ENST00000399455 UTYO14607 1347 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 LCORLQ8N3X6 602 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 NME8Q8N427 588 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 GPRC5AQ8NFJ5 357 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 BEST2Q8NFU1 509 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 DDX50Q9BQ39 737 aaKnown RBP8.7□□□□□ -1.02
USP47-203ENST00000399455 TM6SF1Q9BZW5 370 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 CD163L1Q9NR16 1453 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 OPA1O60313 960 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 VEGFAP15692 232 aaPredicted RBP8.7□□□□□ -1.02
USP47-203ENST00000399455 SFNP31947 248 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 UAP1Q16222 522 aaPredicted RBP8.7□□□□□ -1.02
USP47-203ENST00000399455 ARL13BQ3SXY8 428 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 NOP9Q86U38 636 aaKnown RBP8.7□□□□□ -1.02
USP47-203ENST00000399455 MICALL1Q8N3F8 863 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 RNF26Q9BY78 433 aaPredicted RBP8.7□□□□□ -1.02
USP47-203ENST00000399455 INPP5FQ9Y2H2 1132 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 E9PCH4 1651 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 PPRC1Q5VV67 1664 aaKnown RBP8.7□□□□□ -1.02
USP47-203ENST00000399455 PFASO15067 1338 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 SPP2Q13103 211 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 MAP7D3Q8IWC1 876 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 ZNF280CQ8ND82 737 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 KIAA1024Q9UPX6 916 aa8.7□□□□□ -1.02
USP47-203ENST00000399455 TYRO3Q06418 890 aa8.69□□□□□ -1.02
USP47-203ENST00000399455 PPP2R5DQ14738 602 aa8.69□□□□□ -1.02
USP47-203ENST00000399455 LINC00116Q8NCU8 138 aa8.69□□□□□ -1.02
USP47-203ENST00000399455 OSBPL5Q9H0X9 879 aaPredicted RBP8.69□□□□□ -1.02
USP47-203ENST00000399455 SLC38A10Q9HBR0 1119 aa8.69□□□□□ -1.02
USP47-203ENST00000399455 INO80Q9ULG1 1556 aaPredicted RBP8.69□□□□□ -1.02
USP47-203ENST00000399455 SRGAP2CP0DJJ0 459 aa8.69□□□□□ -1.02
USP47-203ENST00000399455 RLBP1P12271 317 aa8.69□□□□□ -1.02
USP47-203ENST00000399455 STAT3P40763 770 aa8.69□□□□□ -1.02
USP47-203ENST00000399455 TADA2BQ86TJ2 420 aa8.69□□□□□ -1.02
USP47-203ENST00000399455 CEP57Q86XR8 500 aa8.69□□□□□ -1.02
USP47-203ENST00000399455 LPAR1Q92633 364 aa8.69□□□□□ -1.02
USP47-203ENST00000399455 TSKSQ9UJT2 592 aa8.69□□□□□ -1.02
USP47-203ENST00000399455 USP31Q70CQ4 1352 aa8.69□□□□□ -1.02
USP47-203ENST00000399455 POLR3GO15318 223 aaPredicted RBP8.69□□□□□ -1.02
USP47-203ENST00000399455 PPARGP37231 505 aaPredicted RBP8.69□□□□□ -1.02
USP47-203ENST00000399455 STAT1P42224 750 aa8.69□□□□□ -1.02
USP47-203ENST00000399455 VAV2P52735 878 aa8.69□□□□□ -1.02
USP47-203ENST00000399455 KLHL30Q0D2K2 578 aa8.69□□□□□ -1.02
USP47-203ENST00000399455 SEPT2Q15019 361 aa8.69□□□□□ -1.02
USP47-203ENST00000399455 CCDC25Q86WR0 208 aa8.69□□□□□ -1.02
USP47-203ENST00000399455 MTRQ99707 1265 aa8.69□□□□□ -1.02
USP47-203ENST00000399455 MYO1AQ9UBC5 1043 aa8.69□□□□□ -1.02
USP47-203ENST00000399455 MKRN1Q9UHC7 482 aaKnown RBP8.69□□□□□ -1.02
USP47-203ENST00000399455 GUCA1BQ9UMX6 200 aa8.69□□□□□ -1.02
USP47-203ENST00000399455 H7C1W4 665 aa8.69□□□□□ -1.02
USP47-203ENST00000399455 RNF8O76064 485 aa8.69□□□□□ -1.02
USP47-203ENST00000399455 PTK2Q05397 1052 aa8.69□□□□□ -1.02
USP47-203ENST00000399455 KLHL40Q2TBA0 621 aa8.69□□□□□ -1.02
USP47-203ENST00000399455 ZSCAN23Q3MJ62 389 aa8.69□□□□□ -1.02
USP47-203ENST00000399455 VPS52Q8N1B4 723 aa8.69□□□□□ -1.02
USP47-203ENST00000399455 GRK7Q8WTQ7 553 aa8.69□□□□□ -1.02
USP47-203ENST00000399455 KRT76Q01546 638 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms