RNA–Protein interactions for RNA: ENST00000399273.5

CCDC144A-206, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC144A, Length 8,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-206ENST00000399273 HP1BP3Q5SSJ5 553 aaPredicted RBP12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 CC2D2BQ6DHV5 1058 aa12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 TRIM42Q8IWZ5 723 aa12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 ZNF274Q96GC6 653 aaPredicted RBP12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 ACCSQ96QU6 501 aa12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 TSPYL2Q9H2G4 693 aaPredicted RBP12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 RPF1Q9H9Y2 349 aaKnown RBP12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 MAP3K15Q6ZN16 1313 aa12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 YWHAGP61981 247 aaKnown RBP eCLIP12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 CHRNDQ07001 517 aa12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 ARHGEF18Q6ZSZ5 1173 aa12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 CUEDC2Q9H467 287 aa12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 RPN1P04843 607 aaKnown RBP12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 ACBD5Q5T8D3 534 aaPredicted RBP12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 LRRC43Q8N309 656 aa12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 MRPL46Q9H2W6 279 aaKnown RBP12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 LGR6Q9HBX8 967 aa12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 SART1O43290 800 aaKnown RBP12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 FRA10AC1Q70Z53 315 aa12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 LRRC8CQ8TDW0 803 aa12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 GBP5Q96PP8 586 aa12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 RABEP2Q9H5N1 569 aa12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 TMEM206Q9H813 350 aa12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 TEKT2Q9UIF3 430 aa12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 MYOM2P54296 1465 aa12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 PSAPP07602 524 aa12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 PSMC2P35998 433 aaKnown RBP12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 CCHCR1Q8TD31 782 aa12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 USP19O94966 1318 aa12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 LOC102724428A0A0B4J2F2 783 aa12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 ACTN1P12814 892 aa12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 ZNF75DP51815 510 aa12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 SIK1P57059 783 aa12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 PTPN22Q9Y2R2 807 aa12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.59□□□□□ -0.39
CCDC144A-206ENST00000399273 GUCY2FP51841 1108 aa12.58□□□□□ -0.39
CCDC144A-206ENST00000399273 RTKN2Q8IZC4 609 aa12.58□□□□□ -0.39
CCDC144A-206ENST00000399273 RBM46Q8TBY0 533 aaKnown RBP12.58□□□□□ -0.39
CCDC144A-206ENST00000399273 DHX38Q92620 1227 aaKnown RBP12.58□□□□□ -0.39
CCDC144A-206ENST00000399273 FAM95CA0A1B0GW59 222 aa12.58□□□□□ -0.4
CCDC144A-206ENST00000399273 BZW1Q7L1Q6 419 aaKnown RBP12.58□□□□□ -0.4
CCDC144A-206ENST00000399273 MCUQ8NE86 351 aa12.58□□□□□ -0.4
CCDC144A-206ENST00000399273 DDX17Q92841 729 aaKnown RBP12.58□□□□□ -0.4
CCDC144A-206ENST00000399273 HYOU1Q9Y4L1 999 aa12.58□□□□□ -0.4
CCDC144A-206ENST00000399273 KCNA4P22459 653 aa12.58□□□□□ -0.4
CCDC144A-206ENST00000399273 ADALQ6DHV7 355 aa12.58□□□□□ -0.4
CCDC144A-206ENST00000399273 GPKOWQ92917 476 aaPredicted RBP eCLIP12.58□□□□□ -0.4
CCDC144A-206ENST00000399273 KCTD1Q719H9 257 aa12.58□□□□□ -0.4
CCDC144A-206ENST00000399273 C7orf31Q8N865 590 aa12.58□□□□□ -0.4
CCDC144A-206ENST00000399273 NUDCD1Q96RS6 583 aa12.58□□□□□ -0.4
CCDC144A-206ENST00000399273 USP17L3A6NCW0 530 aa12.58□□□□□ -0.4
CCDC144A-206ENST00000399273 USP17L4A6NCW7 530 aa12.58□□□□□ -0.4
CCDC144A-206ENST00000399273 PPP4R4Q6NUP7 873 aa12.58□□□□□ -0.4
CCDC144A-206ENST00000399273 CAPN12Q6ZSI9 719 aa12.58□□□□□ -0.4
CCDC144A-206ENST00000399273 NUDT18Q6ZVK8 323 aa12.58□□□□□ -0.4
CCDC144A-206ENST00000399273 G2E3Q7L622 706 aa12.58□□□□□ -0.4
CCDC144A-206ENST00000399273 USP17L1Q7RTZ2 530 aa12.58□□□□□ -0.4
CCDC144A-206ENST00000399273 TEX12Q9BXU0 123 aa12.58□□□□□ -0.4
CCDC144A-206ENST00000399273 DHX36Q9H2U1 1008 aaKnown RBP12.58□□□□□ -0.4
CCDC144A-206ENST00000399273 PIDD1Q9HB75 910 aa12.58□□□□□ -0.4
CCDC144A-206ENST00000399273 NUP153P49790 1475 aaKnown RBP12.58□□□□□ -0.4
CCDC144A-206ENST00000399273 NNMTP40261 264 aa12.58□□□□□ -0.4
CCDC144A-206ENST00000399273 POLR2FP61218 127 aaKnown RBP12.58□□□□□ -0.4
CCDC144A-206ENST00000399273 AK8Q96MA6 479 aa12.58□□□□□ -0.4
CCDC144A-206ENST00000399273 RASSF4Q9H2L5 321 aa12.58□□□□□ -0.4
CCDC144A-206ENST00000399273 MRPL47Q9HD33 250 aaKnown RBP12.58□□□□□ -0.4
CCDC144A-206ENST00000399273 BBOX1O75936 387 aa12.58□□□□□ -0.4
CCDC144A-206ENST00000399273 CRKLP46109 303 aaKnown RBP12.58□□□□□ -0.4
CCDC144A-206ENST00000399273 SKIV2LQ15477 1246 aaKnown RBP12.58□□□□□ -0.4
CCDC144A-206ENST00000399273 STAMQ92783 540 aa12.58□□□□□ -0.4
CCDC144A-206ENST00000399273 CBX8Q9HC52 389 aa12.58□□□□□ -0.4
CCDC144A-206ENST00000399273 FARP1Q9Y4F1 1045 aaPredicted RBP12.58□□□□□ -0.4
CCDC144A-206ENST00000399273 SPECC1L-ADORA2AF8WAN1 911 aa12.57□□□□□ -0.4
CCDC144A-206ENST00000399273 DPYSL4O14531 572 aa12.57□□□□□ -0.4
CCDC144A-206ENST00000399273 BAG2O95816 211 aa12.57□□□□□ -0.4
CCDC144A-206ENST00000399273 MYL3P08590 195 aa12.57□□□□□ -0.4
CCDC144A-206ENST00000399273 CYP4A11Q02928 519 aa12.57□□□□□ -0.4
CCDC144A-206ENST00000399273 CEP170P1Q96L14 293 aa12.57□□□□□ -0.4
CCDC144A-206ENST00000399273 ZNF212Q9UDV6 495 aa12.57□□□□□ -0.4
CCDC144A-206ENST00000399273 MAPK4P31152 587 aa12.57□□□□□ -0.4
CCDC144A-206ENST00000399273 TBCCQ15814 346 aa12.57□□□□□ -0.4
CCDC144A-206ENST00000399273 RSBN1LQ6PCB5 846 aaPredicted RBP12.57□□□□□ -0.4
CCDC144A-206ENST00000399273 FANCBQ8NB91 859 aa12.57□□□□□ -0.4
CCDC144A-206ENST00000399273 KANSL2Q9H9L4 492 aa12.57□□□□□ -0.4
CCDC144A-206ENST00000399273 CHD1O14646 1710 aa12.57□□□□□ -0.4
CCDC144A-206ENST00000399273 TMCC1O94876 653 aa12.57□□□□□ -0.4
CCDC144A-206ENST00000399273 CHEK2O96017 543 aa12.57□□□□□ -0.4
CCDC144A-206ENST00000399273 MX2P20592 715 aa12.57□□□□□ -0.4
CCDC144A-206ENST00000399273 GPIHBP1Q8IV16 184 aa12.57□□□□□ -0.4
CCDC144A-206ENST00000399273 TNKSO95271 1327 aa12.57□□□□□ -0.4
CCDC144A-206ENST00000399273 DENND3A2RUS2 1198 aa12.57□□□□□ -0.4
CCDC144A-206ENST00000399273 MYSM1Q5VVJ2 828 aa12.57□□□□□ -0.4
CCDC144A-206ENST00000399273 GJA10Q969M2 543 aa12.57□□□□□ -0.4
CCDC144A-206ENST00000399273 PPWD1Q96BP3 646 aaKnown RBP12.57□□□□□ -0.4
CCDC144A-206ENST00000399273 NDUFB9Q9Y6M9 179 aa12.57□□□□□ -0.4
CCDC144A-206ENST00000399273 GCFC2P16383 781 aaKnown RBP12.57□□□□□ -0.4
CCDC144A-206ENST00000399273 CLNS1AP54105 237 aaKnown RBP12.57□□□□□ -0.4
CCDC144A-206ENST00000399273 ANKRD20A4Q4UJ75 823 aa12.57□□□□□ -0.4
CCDC144A-206ENST00000399273 ANKRD20A8PQ5CZ79 823 aa12.57□□□□□ -0.4
CCDC144A-206ENST00000399273 ANKRD20A2Q5SQ80 823 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms