RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 CCDC62Q6P9F0 684 aa16.22■□□□□ 0.19
HLA-DQB1-202ENST00000399079 CXCL17Q6UXB2 119 aa16.22■□□□□ 0.19
HLA-DQB1-202ENST00000399079 VTI1AQ96AJ9 217 aa16.22■□□□□ 0.19
HLA-DQB1-202ENST00000399079 STXBP3O00186 592 aa16.21■□□□□ 0.19
HLA-DQB1-202ENST00000399079 OR6J1Q8NGC5 347 aa16.21■□□□□ 0.19
HLA-DQB1-202ENST00000399079 GLT1D1Q96MS3 346 aa16.21■□□□□ 0.19
HLA-DQB1-202ENST00000399079 LAMA3Q16787 3333 aa16.21■□□□□ 0.18
HLA-DQB1-202ENST00000399079 CCND2P30279 289 aa16.2■□□□□ 0.18
HLA-DQB1-202ENST00000399079 MRPS9P82933 396 aaKnown RBP16.2■□□□□ 0.18
HLA-DQB1-202ENST00000399079 PKN1Q16512 942 aa16.2■□□□□ 0.18
HLA-DQB1-202ENST00000399079 C1orf53Q5VUE5 145 aa16.2■□□□□ 0.18
HLA-DQB1-202ENST00000399079 ZNF274Q96GC6 653 aaPredicted RBP16.2■□□□□ 0.18
HLA-DQB1-202ENST00000399079 BARHL2Q9NY43 387 aa16.2■□□□□ 0.18
HLA-DQB1-202ENST00000399079 DDX41Q9UJV9 622 aaKnown RBP16.2■□□□□ 0.18
HLA-DQB1-202ENST00000399079 COLQQ9Y215 455 aaPredicted RBP16.2■□□□□ 0.18
HLA-DQB1-202ENST00000399079 MRVI1Q9Y6F6 885 aa16.2■□□□□ 0.18
HLA-DQB1-202ENST00000399079 FRMPD4Q14CM0 1322 aa16.19■□□□□ 0.18
HLA-DQB1-202ENST00000399079 NKRFO15226 690 aaKnown RBP eCLIP16.19■□□□□ 0.18
HLA-DQB1-202ENST00000399079 EIF5BO60841 1220 aaKnown RBP16.19■□□□□ 0.18
HLA-DQB1-202ENST00000399079 TLE2Q04725 743 aa16.19■□□□□ 0.18
HLA-DQB1-202ENST00000399079 PFKFB3Q16875 520 aaPredicted RBP16.19■□□□□ 0.18
HLA-DQB1-202ENST00000399079 CHRDL2Q6WN34 429 aa16.19■□□□□ 0.18
HLA-DQB1-202ENST00000399079 IL17RAQ96F46 866 aa16.19■□□□□ 0.18
HLA-DQB1-202ENST00000399079 RTEL1Q9NZ71 1219 aa16.19■□□□□ 0.18
HLA-DQB1-202ENST00000399079 ELP1O95163 1332 aa16.19■□□□□ 0.18
HLA-DQB1-202ENST00000399079 SMCO2A6NFE2 343 aa16.19■□□□□ 0.18
HLA-DQB1-202ENST00000399079 PRPF3O43395 683 aaKnown RBP16.19■□□□□ 0.18
HLA-DQB1-202ENST00000399079 SORBS3O60504 671 aa16.19■□□□□ 0.18
HLA-DQB1-202ENST00000399079 PQBP1O60828 265 aaKnown RBP16.19■□□□□ 0.18
HLA-DQB1-202ENST00000399079 SCG2P13521 617 aa16.19■□□□□ 0.18
HLA-DQB1-202ENST00000399079 IFNAR1P17181 557 aa16.19■□□□□ 0.18
HLA-DQB1-202ENST00000399079 AK2P54819 239 aa16.19■□□□□ 0.18
HLA-DQB1-202ENST00000399079 PSMC6P62333 389 aa16.19■□□□□ 0.18
HLA-DQB1-202ENST00000399079 SLC26A6Q9BXS9 759 aa16.19■□□□□ 0.18
HLA-DQB1-202ENST00000399079 RIC8AQ9NPQ8 531 aa16.19■□□□□ 0.18
HLA-DQB1-202ENST00000399079 TPCN1Q9ULQ1 816 aa16.19■□□□□ 0.18
HLA-DQB1-202ENST00000399079 KIAA1217Q5T5P2 1943 aa16.18■□□□□ 0.18
HLA-DQB1-202ENST00000399079 A6NJR5 290 aa16.18■□□□□ 0.18
HLA-DQB1-202ENST00000399079 hCG_1984214I3L0E3 225 aa16.18■□□□□ 0.18
HLA-DQB1-202ENST00000399079 ADAMTS3O15072 1205 aa16.18■□□□□ 0.18
HLA-DQB1-202ENST00000399079 ZEB2O60315 1214 aa16.18■□□□□ 0.18
HLA-DQB1-202ENST00000399079 DTNBO60941 627 aa16.18■□□□□ 0.18
HLA-DQB1-202ENST00000399079 GH1P01241 217 aa16.18■□□□□ 0.18
HLA-DQB1-202ENST00000399079 MYL3P08590 195 aa16.18■□□□□ 0.18
HLA-DQB1-202ENST00000399079 CPT1AP50416 773 aa16.18■□□□□ 0.18
HLA-DQB1-202ENST00000399079 SP2Q02086 613 aa16.18■□□□□ 0.18
HLA-DQB1-202ENST00000399079 ARHGAP1Q07960 439 aa16.18■□□□□ 0.18
HLA-DQB1-202ENST00000399079 SH3RF1Q7Z6J0 888 aa16.18■□□□□ 0.18
HLA-DQB1-202ENST00000399079 ZNF713Q8N859 430 aaPredicted RBP16.18■□□□□ 0.18
HLA-DQB1-202ENST00000399079 AFG1LQ8WV93 481 aa16.18■□□□□ 0.18
HLA-DQB1-202ENST00000399079 PGBD1Q96JS3 809 aa16.18■□□□□ 0.18
HLA-DQB1-202ENST00000399079 ALDH8A1Q9H2A2 487 aaPredicted RBP16.18■□□□□ 0.18
HLA-DQB1-202ENST00000399079 BCAS3Q9H6U6 928 aa16.18■□□□□ 0.18
HLA-DQB1-202ENST00000399079 PRDM5Q9NQX1 630 aaPredicted RBP16.18■□□□□ 0.18
HLA-DQB1-202ENST00000399079 PCDHA6Q9UN73 950 aa16.18■□□□□ 0.18
HLA-DQB1-202ENST00000399079 PCDHA8Q9Y5H6 950 aa16.18■□□□□ 0.18
HLA-DQB1-202ENST00000399079 GRIN2DO15399 1336 aa16.17■□□□□ 0.18
HLA-DQB1-202ENST00000399079 A0A0U1RQG5 324 aaPredicted RBP16.17■□□□□ 0.18
HLA-DQB1-202ENST00000399079 SPDYE3A6NKU9 549 aa16.17■□□□□ 0.18
HLA-DQB1-202ENST00000399079 CDK7P50613 346 aa16.17■□□□□ 0.18
HLA-DQB1-202ENST00000399079 ADCY7P51828 1080 aa16.17■□□□□ 0.18
HLA-DQB1-202ENST00000399079 NEK4P51957 841 aa16.17■□□□□ 0.18
HLA-DQB1-202ENST00000399079 PURAQ00577 322 aaKnown RBP16.17■□□□□ 0.18
HLA-DQB1-202ENST00000399079 AKAP17AQ02040 695 aaKnown RBP16.17■□□□□ 0.18
HLA-DQB1-202ENST00000399079 PCNX4Q63HM2 1172 aa16.17■□□□□ 0.18
HLA-DQB1-202ENST00000399079 PPP1R18Q6NYC8 613 aa16.17■□□□□ 0.18
HLA-DQB1-202ENST00000399079 PPP1R13LQ8WUF5 828 aa16.17■□□□□ 0.18
HLA-DQB1-202ENST00000399079 INPP4AQ96PE3 977 aaPredicted RBP16.17■□□□□ 0.18
HLA-DQB1-202ENST00000399079 RNF26Q9BY78 433 aaPredicted RBP16.17■□□□□ 0.18
HLA-DQB1-202ENST00000399079 PDLIM7Q9NR12 457 aa16.17■□□□□ 0.18
HLA-DQB1-202ENST00000399079 TMEM260Q9NX78 707 aa16.17■□□□□ 0.18
HLA-DQB1-202ENST00000399079 TRIM43BA6NCK2 446 aa16.16■□□□□ 0.18
HLA-DQB1-202ENST00000399079 ARVCFO00192 962 aa16.16■□□□□ 0.18
HLA-DQB1-202ENST00000399079 CPLX1O14810 134 aa16.16■□□□□ 0.18
HLA-DQB1-202ENST00000399079 MAGEA10P43363 369 aaPredicted RBP16.16■□□□□ 0.18
HLA-DQB1-202ENST00000399079 MDM2Q00987 491 aaPredicted RBP16.16■□□□□ 0.18
HLA-DQB1-202ENST00000399079 SCRN1Q12765 414 aa16.16■□□□□ 0.18
HLA-DQB1-202ENST00000399079 ITGA7Q13683 1181 aa16.16■□□□□ 0.18
HLA-DQB1-202ENST00000399079 ANKRD33Q7Z3H0 272 aa16.16■□□□□ 0.18
HLA-DQB1-202ENST00000399079 TRIM43Q96BQ3 446 aaPredicted RBP16.16■□□□□ 0.18
HLA-DQB1-202ENST00000399079 RBM27Q9P2N5 1060 aaKnown RBP16.16■□□□□ 0.18
HLA-DQB1-202ENST00000399079 CABYRO75952 493 aa16.15■□□□□ 0.18
HLA-DQB1-202ENST00000399079 UBA1P22314 1058 aaKnown RBP16.15■□□□□ 0.18
HLA-DQB1-202ENST00000399079 FAAP100Q0VG06 881 aa16.15■□□□□ 0.18
HLA-DQB1-202ENST00000399079 SEMA3FQ13275 785 aa16.15■□□□□ 0.18
HLA-DQB1-202ENST00000399079 BRDTQ58F21 947 aaPredicted RBP16.15■□□□□ 0.18
HLA-DQB1-202ENST00000399079 MYSM1Q5VVJ2 828 aa16.15■□□□□ 0.18
HLA-DQB1-202ENST00000399079 DHX37Q8IY37 1157 aaKnown RBP16.15■□□□□ 0.18
HLA-DQB1-202ENST00000399079 GDF15Q99988 308 aa16.15■□□□□ 0.18
HLA-DQB1-202ENST00000399079 SLKQ9H2G2 1235 aaPredicted RBP16.15■□□□□ 0.18
HLA-DQB1-202ENST00000399079 POLR3EQ9NVU0 708 aa16.15■□□□□ 0.18
HLA-DQB1-202ENST00000399079 VPS54Q9P1Q0 977 aa16.15■□□□□ 0.18
HLA-DQB1-202ENST00000399079 PRKAG2Q9UGJ0 569 aa16.15■□□□□ 0.18
HLA-DQB1-202ENST00000399079 DCDC2CA8MYV0 355 aa16.14■□□□□ 0.18
HLA-DQB1-202ENST00000399079 STAM2O75886 525 aa16.14■□□□□ 0.18
HLA-DQB1-202ENST00000399079 LARGE1O95461 756 aa16.14■□□□□ 0.18
HLA-DQB1-202ENST00000399079 GGPS1O95749 300 aa16.14■□□□□ 0.18
HLA-DQB1-202ENST00000399079 MMP3P08254 477 aa16.14■□□□□ 0.18
HLA-DQB1-202ENST00000399079 CLTBP09497 229 aa16.14■□□□□ 0.18
HLA-DQB1-202ENST00000399079 TGFB3P10600 412 aa16.14■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms