RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 PSMD6Q15008 389 aa2.96□□□□□ -1.93
CHD9-202ENST00000398510 KRT24Q2M2I5 525 aa2.96□□□□□ -1.93
CHD9-202ENST00000398510 KIAA1755Q5JYT7 1200 aa2.96□□□□□ -1.93
CHD9-202ENST00000398510 ZNF365Q70YC5 407 aa2.96□□□□□ -1.93
CHD9-202ENST00000398510 APPBP2Q92624 585 aa2.96□□□□□ -1.93
CHD9-202ENST00000398510 POP5Q969H6 163 aaKnown RBP2.96□□□□□ -1.93
CHD9-202ENST00000398510 OSBP2Q969R2 916 aa2.96□□□□□ -1.93
CHD9-202ENST00000398510 ERO1AQ96HE7 468 aa2.96□□□□□ -1.93
CHD9-202ENST00000398510 EPC1Q9H2F5 836 aa2.96□□□□□ -1.93
CHD9-202ENST00000398510 CPSF3Q9UKF6 684 aaKnown RBP2.96□□□□□ -1.93
CHD9-202ENST00000398510 TRIM35Q9UPQ4 493 aa2.96□□□□□ -1.93
CHD9-202ENST00000398510 BAZ2AQ9UIF9 1905 aaKnown RBP2.96□□□□□ -1.93
CHD9-202ENST00000398510 ANKRD12Q6UB98 2062 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 H7C0S8 307 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 PARNO95453 639 aaKnown RBP2.96□□□□□ -1.94
CHD9-202ENST00000398510 TBXAS1P24557 533 aaPredicted RBP2.96□□□□□ -1.94
CHD9-202ENST00000398510 GEMIN4P57678 1058 aaKnown RBP2.96□□□□□ -1.94
CHD9-202ENST00000398510 PRPF4BQ13523 1007 aaKnown RBP2.96□□□□□ -1.94
CHD9-202ENST00000398510 HSP90AA5PQ58FG0 334 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 ARMCX5Q6P1M9 558 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 TOGARAM2Q6ZUX3 1019 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 CAMK1DQ8IU85 385 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 PHC3Q8NDX5 983 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 DTX3LQ8TDB6 740 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 TEKT4Q8WW24 435 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 DYRK4Q9NR20 520 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 HCN3Q9P1Z3 774 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 LSM7Q9UK45 103 aaKnown RBP2.96□□□□□ -1.94
CHD9-202ENST00000398510 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.96□□□□□ -1.94
CHD9-202ENST00000398510 ZNF839A8K0R7 811 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 RSPH10B2B2RC85 870 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 LUC7L3O95232 432 aaKnown RBP2.96□□□□□ -1.94
CHD9-202ENST00000398510 RSPH10BP0C881 870 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 SERPINB6P35237 376 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 CPT1AP50416 773 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 TRADDQ15628 312 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 CCDC93Q567U6 631 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 DCUN1D2Q6PH85 259 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 IFT20Q8IY31 132 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 PSMA8Q8TAA3 256 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 LPAR1Q92633 364 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 ARL8AQ96BM9 186 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 MRPL44Q9H9J2 332 aaKnown RBP2.96□□□□□ -1.94
CHD9-202ENST00000398510 MYH14Q7Z406 1995 aaKnown RBP2.96□□□□□ -1.94
CHD9-202ENST00000398510 N4BP3O15049 544 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 CIAO1O76071 339 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 EEF2P13639 858 aaKnown RBP2.96□□□□□ -1.94
CHD9-202ENST00000398510 CCR3P51677 355 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 PLCB3Q01970 1234 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 TAP1Q03518 808 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 PICALMQ13492 652 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 NEDD9Q14511 834 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 SLC9C2Q5TAH2 1124 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 RC3H1Q5TC82 1133 aaKnown RBP2.96□□□□□ -1.94
CHD9-202ENST00000398510 FAM160B2Q86V87 743 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 HPS3Q969F9 1004 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 CCDC42Q96M95 316 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 EFHD1Q9BUP0 239 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 IFIH1Q9BYX4 1025 aaKnown RBP2.96□□□□□ -1.94
CHD9-202ENST00000398510 BAZ2BQ9UIF8 2168 aaKnown RBP2.96□□□□□ -1.94
CHD9-202ENST00000398510 PPEF1O14829 653 aaPredicted RBP2.96□□□□□ -1.94
CHD9-202ENST00000398510 GCP02774 474 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 TMEM191BP0C7N4 346 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 MAPK9P45984 424 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 SNRPFP62306 86 aaKnown RBP2.96□□□□□ -1.94
CHD9-202ENST00000398510 SNX30Q5VWJ9 437 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 KRT222Q8N1A0 295 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 CCDC51Q96ER9 411 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 IL17RAQ96F46 866 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 MRPL48Q96GC5 212 aaKnown RBP2.96□□□□□ -1.94
CHD9-202ENST00000398510 PAGE5Q96GU1 130 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 VPS39Q96JC1 886 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 FAM129AQ9BZQ8 928 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 CDR2Q01850 454 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 ICA1Q05084 483 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 TRIP4Q15650 581 aaPredicted RBP2.96□□□□□ -1.94
CHD9-202ENST00000398510 GPR158Q5T848 1215 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 ANKS3Q6ZW76 656 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 N4BP2L2Q92802 583 aaPredicted RBP2.96□□□□□ -1.94
CHD9-202ENST00000398510 MLXIPQ9HAP2 919 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 SNRKQ9NRH2 765 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 AKAP7Q9P0M2 348 aaPredicted RBP2.96□□□□□ -1.94
CHD9-202ENST00000398510 SAE1Q9UBE0 346 aaPredicted RBP2.96□□□□□ -1.94
CHD9-202ENST00000398510 ABT1Q9ULW3 272 aaKnown RBP2.96□□□□□ -1.94
CHD9-202ENST00000398510 DIS3Q9Y2L1 958 aaKnown RBP2.96□□□□□ -1.94
CHD9-202ENST00000398510 CDHR2Q9BYE9 1310 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 FRMD3A2A2Y4 597 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 CTAGE15A4D2H0 777 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 MSCO60682 206 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 CTAGE8P0CG41 777 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 KRT5P13647 590 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 HOXB6P17509 224 aaKnown RBP2.96□□□□□ -1.94
CHD9-202ENST00000398510 KPNA1P52294 538 aaPredicted RBP2.96□□□□□ -1.94
CHD9-202ENST00000398510 RASA3Q14644 834 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 E4F1Q66K89 784 aaPredicted RBP2.96□□□□□ -1.94
CHD9-202ENST00000398510 XRRA1Q6P2D8 792 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 CTAGE6Q86UF2 777 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 IFNL1Q8IU54 200 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 CTAGE4Q8IX94 777 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 PANX2Q96RD6 677 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms