RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 PASKQ96RG2 1323 aa13.35□□□□□ -0.27
SMU1-201ENST00000397149 M0R2C6 588 aa13.35□□□□□ -0.27
SMU1-201ENST00000397149 PPIP5K2O43314 1243 aa13.35□□□□□ -0.27
SMU1-201ENST00000397149 SERPIND1P05546 499 aa13.35□□□□□ -0.27
SMU1-201ENST00000397149 ZFXP17010 805 aaPredicted RBP13.35□□□□□ -0.27
SMU1-201ENST00000397149 EHHADHQ08426 723 aa13.35□□□□□ -0.27
SMU1-201ENST00000397149 CDO1Q16878 200 aa13.35□□□□□ -0.27
SMU1-201ENST00000397149 FASTKD5Q7L8L6 764 aaKnown RBP13.35□□□□□ -0.27
SMU1-201ENST00000397149 NXF1Q9UBU9 619 aaKnown RBP13.35□□□□□ -0.27
SMU1-201ENST00000397149 CACNA2D2Q9NY47 1150 aa13.35□□□□□ -0.27
SMU1-201ENST00000397149 STX18Q9P2W9 335 aaKnown RBP13.35□□□□□ -0.27
SMU1-201ENST00000397149 CYP4A11Q02928 519 aa13.35□□□□□ -0.27
SMU1-201ENST00000397149 C11orf74Q86VG3 221 aa13.35□□□□□ -0.27
SMU1-201ENST00000397149 TSC1Q92574 1164 aa13.35□□□□□ -0.27
SMU1-201ENST00000397149 MYCBPQ99417 103 aaPredicted RBP13.35□□□□□ -0.27
SMU1-201ENST00000397149 ZSCAN20P17040 1043 aaPredicted RBP13.35□□□□□ -0.27
SMU1-201ENST00000397149 ITGA6P23229 1130 aa13.35□□□□□ -0.27
SMU1-201ENST00000397149 ANXA13P27216 316 aa13.35□□□□□ -0.27
SMU1-201ENST00000397149 ZNF229Q9UJW7 825 aa13.35□□□□□ -0.27
SMU1-201ENST00000397149 INO80B-WBP1J3KQ70 363 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 FSCBQ5H9T9 825 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 CCDC197Q8NCU1 140 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 INO80BQ9C086 356 aaPredicted RBP13.34□□□□□ -0.27
SMU1-201ENST00000397149 SNX5Q9Y5X3 404 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 SNX2O60749 519 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 CUTAO60888 179 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 KRT8P05787 483 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 PDE6BP35913 854 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 AARS2Q5JTZ9 985 aaKnown RBP13.34□□□□□ -0.27
SMU1-201ENST00000397149 TTLL11Q8NHH1 800 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 GJA10Q969M2 543 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 IQCDQ96DY2 449 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 SERTAD1Q9UHV2 236 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 MT-ND3P03897 115 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 SLC9A1P19634 815 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 FLCNQ8NFG4 579 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 HYOU1Q9Y4L1 999 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 KCNJ18B7U540 433 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 ARIH2O95376 493 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 KCNJ12Q14500 433 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 MYOCDQ8IZQ8 938 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 MLKLQ8NB16 471 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 ARMC2Q8NEN0 867 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 SLC39A2Q9NP94 309 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 PJA2O43164 708 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 SLFN14P0C7P3 912 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 ZNF75DP51815 510 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 RASSF7Q02833 373 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 ACCSLQ4AC99 568 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 KLC3Q6P597 504 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 REXO1Q8N1G1 1221 aaKnown RBP13.34□□□□□ -0.27
SMU1-201ENST00000397149 USP6NLQ92738 828 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 ANKRD36BP1Q96IX9 119 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 LRRC4Q9HBW1 653 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 USP40Q9NVE5 1235 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 FGFR1OP2Q9NVK5 253 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 MCF2LO15068 1137 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 SUPT3HO75486 399 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 THEMIS2Q5TEJ8 643 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 CCDC84Q86UT8 332 aaPredicted RBP13.34□□□□□ -0.27
SMU1-201ENST00000397149 TRIM42Q8IWZ5 723 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 LRRC47Q8N1G4 583 aaKnown RBP13.34□□□□□ -0.27
SMU1-201ENST00000397149 KIFC3Q9BVG8 833 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 KLC2Q9H0B6 622 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 C6orf203Q9P0P8 240 aaPredicted RBP13.34□□□□□ -0.27
SMU1-201ENST00000397149 SUN2Q9UH99 717 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 ATP8A1Q9Y2Q0 1164 aa13.34□□□□□ -0.27
SMU1-201ENST00000397149 KRT7P08729 469 aa13.33□□□□□ -0.27
SMU1-201ENST00000397149 TFAP4Q01664 338 aa13.33□□□□□ -0.27
SMU1-201ENST00000397149 SCARA5Q6ZMJ2 495 aa13.33□□□□□ -0.27
SMU1-201ENST00000397149 NOSTRINQ8IVI9 506 aa13.33□□□□□ -0.27
SMU1-201ENST00000397149 HSPH1Q92598 858 aa13.33□□□□□ -0.27
SMU1-201ENST00000397149 ZNF711Q9Y462 761 aa13.33□□□□□ -0.27
SMU1-201ENST00000397149 ARL4AP40617 200 aa13.33□□□□□ -0.28
SMU1-201ENST00000397149 DEPDC1Q5TB30 811 aa13.33□□□□□ -0.28
SMU1-201ENST00000397149 EEPD1Q7L9B9 569 aa13.33□□□□□ -0.28
SMU1-201ENST00000397149 HDDC2Q7Z4H3 204 aa13.33□□□□□ -0.28
SMU1-201ENST00000397149 AP5M1Q9H0R1 490 aa13.33□□□□□ -0.28
SMU1-201ENST00000397149 GTSE1Q9NYZ3 720 aa13.33□□□□□ -0.28
SMU1-201ENST00000397149 KRT1P04264 644 aa13.33□□□□□ -0.28
SMU1-201ENST00000397149 ATP8B2P98198 1209 aa13.33□□□□□ -0.28
SMU1-201ENST00000397149 TRIML1Q8N9V2 468 aa13.33□□□□□ -0.28
SMU1-201ENST00000397149 RFWD2Q8NHY2 731 aa13.33□□□□□ -0.28
SMU1-201ENST00000397149 MIS12Q9H081 205 aa13.33□□□□□ -0.28
SMU1-201ENST00000397149 GLT8D2Q9H1C3 349 aa13.33□□□□□ -0.28
SMU1-201ENST00000397149 DDX25Q9UHL0 483 aaKnown RBP13.33□□□□□ -0.28
SMU1-201ENST00000397149 POGZQ7Z3K3 1410 aa13.33□□□□□ -0.28
SMU1-201ENST00000397149 TTI1O43156 1089 aa13.33□□□□□ -0.28
SMU1-201ENST00000397149 LRRN2O75325 713 aa13.33□□□□□ -0.28
SMU1-201ENST00000397149 TRIM58Q8NG06 486 aa13.33□□□□□ -0.28
SMU1-201ENST00000397149 TRIM15Q9C019 465 aa13.33□□□□□ -0.28
SMU1-201ENST00000397149 CCNL1Q9UK58 526 aaPredicted RBP13.33□□□□□ -0.28
SMU1-201ENST00000397149 MYO1FO00160 1098 aa13.33□□□□□ -0.28
SMU1-201ENST00000397149 MAPK4P31152 587 aa13.33□□□□□ -0.28
SMU1-201ENST00000397149 TFAMQ00059 246 aaKnown RBP13.33□□□□□ -0.28
SMU1-201ENST00000397149 APOA4P06727 396 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 CD58P19256 250 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 RECQLP46063 649 aaPredicted RBP13.32□□□□□ -0.28
SMU1-201ENST00000397149 TDRD7Q8NHU6 1098 aaKnown RBP13.32□□□□□ -0.28
SMU1-201ENST00000397149 ABCC11Q96J66 1382 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms