RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 MDM2Q00987 491 aaPredicted RBP16.77■□□□□ 0.28
SEC13-208ENST00000397109 PGM5Q15124 567 aa16.77■□□□□ 0.28
SEC13-208ENST00000397109 SMARCC2Q8TAQ2 1214 aa16.77■□□□□ 0.28
SEC13-208ENST00000397109 IL17RAQ96F46 866 aa16.77■□□□□ 0.28
SEC13-208ENST00000397109 TBC1D32Q96NH3 1257 aa16.77■□□□□ 0.28
SEC13-208ENST00000397109 TMEM39AQ9NV64 488 aa16.77■□□□□ 0.28
SEC13-208ENST00000397109 NAP1L2Q9ULW6 460 aaPredicted RBP16.77■□□□□ 0.28
SEC13-208ENST00000397109 A6NJR5 290 aa16.76■□□□□ 0.27
SEC13-208ENST00000397109 KIAA0355O15063 1070 aa16.76■□□□□ 0.27
SEC13-208ENST00000397109 ARIH2O95376 493 aa16.76■□□□□ 0.27
SEC13-208ENST00000397109 GH1P01241 217 aa16.76■□□□□ 0.27
SEC13-208ENST00000397109 ITGA7Q13683 1181 aa16.76■□□□□ 0.27
SEC13-208ENST00000397109 SLC43A3Q8NBI5 491 aa16.76■□□□□ 0.27
SEC13-208ENST00000397109 BRF1Q92994 677 aa16.76■□□□□ 0.27
SEC13-208ENST00000397109 AGXT2Q9BYV1 514 aa16.76■□□□□ 0.27
SEC13-208ENST00000397109 PSTPIP2Q9H939 334 aa16.76■□□□□ 0.27
SEC13-208ENST00000397109 MRVI1Q9Y6F6 885 aa16.76■□□□□ 0.27
SEC13-208ENST00000397109 TRIM43BA6NCK2 446 aa16.75■□□□□ 0.27
SEC13-208ENST00000397109 STAM2O75886 525 aa16.75■□□□□ 0.27
SEC13-208ENST00000397109 TGFB3P10600 412 aa16.75■□□□□ 0.27
SEC13-208ENST00000397109 METAP2P50579 478 aaKnown RBP eCLIP16.75■□□□□ 0.271e-7■■□□□ 13.6
SEC13-208ENST00000397109 APOBRQ0VD83 1088 aa16.75■□□□□ 0.27
SEC13-208ENST00000397109 FAAP100Q0VG06 881 aa16.75■□□□□ 0.27
SEC13-208ENST00000397109 LY6KQ17RY6 165 aa16.75■□□□□ 0.27
SEC13-208ENST00000397109 SH3RF1Q7Z6J0 888 aa16.75■□□□□ 0.27
SEC13-208ENST00000397109 TEX2Q8IWB9 1127 aa16.75■□□□□ 0.27
SEC13-208ENST00000397109 COPS5Q92905 334 aa16.75■□□□□ 0.27
SEC13-208ENST00000397109 TRIM43Q96BQ3 446 aaPredicted RBP16.75■□□□□ 0.27
SEC13-208ENST00000397109 MTG1Q9BT17 334 aaPredicted RBP16.75■□□□□ 0.27
SEC13-208ENST00000397109 TM6SF1Q9BZW5 370 aa16.75■□□□□ 0.27
SEC13-208ENST00000397109 DDX41Q9UJV9 622 aaKnown RBP16.75■□□□□ 0.27
SEC13-208ENST00000397109 FRMPD4Q14CM0 1322 aa16.74■□□□□ 0.27
SEC13-208ENST00000397109 CNTNAP5Q8WYK1 1306 aa16.74■□□□□ 0.27
SEC13-208ENST00000397109 hCG_1642624A0A1W2PR95 340 aa16.74■□□□□ 0.27
SEC13-208ENST00000397109 hCG_1984214I3L0E3 225 aa16.74■□□□□ 0.27
SEC13-208ENST00000397109 MEIS2O14770 477 aa16.74■□□□□ 0.27
SEC13-208ENST00000397109 MYL3P08590 195 aa16.74■□□□□ 0.27
SEC13-208ENST00000397109 RAG1P15918 1043 aa16.74■□□□□ 0.27
SEC13-208ENST00000397109 FXR1P51114 621 aaKnown RBP eCLIP16.74■□□□□ 0.27
SEC13-208ENST00000397109 ANAPC15P60006 121 aa16.74■□□□□ 0.27
SEC13-208ENST00000397109 PURAQ00577 322 aaKnown RBP16.74■□□□□ 0.27
SEC13-208ENST00000397109 FUT2Q10981 343 aa16.74■□□□□ 0.27
SEC13-208ENST00000397109 XRRA1Q6P2D8 792 aa16.74■□□□□ 0.27
SEC13-208ENST00000397109 USP17L6PQ6QN14 398 aa16.74■□□□□ 0.27
SEC13-208ENST00000397109 RUFY3Q7L099 469 aa16.74■□□□□ 0.27
SEC13-208ENST00000397109 HEATR3Q7Z4Q2 680 aa16.74■□□□□ 0.27
SEC13-208ENST00000397109 TDHQ8IZJ6 230 aa16.74■□□□□ 0.27
SEC13-208ENST00000397109 ZNF713Q8N859 430 aaPredicted RBP16.74■□□□□ 0.27
SEC13-208ENST00000397109 ZSWIM6Q9HCJ5 1215 aa16.74■□□□□ 0.27
SEC13-208ENST00000397109 FAM217BQ9NTX9 383 aaPredicted RBP16.74■□□□□ 0.27
SEC13-208ENST00000397109 CYP46A1Q9Y6A2 500 aa16.74■□□□□ 0.27
SEC13-208ENST00000397109 ARHGAP1Q07960 439 aa16.73■□□□□ 0.27
SEC13-208ENST00000397109 LAMC2Q13753 1193 aa16.73■□□□□ 0.27
SEC13-208ENST00000397109 GNPTABQ3T906 1256 aa16.73■□□□□ 0.27
SEC13-208ENST00000397109 FAM126BQ8IXS8 530 aa16.73■□□□□ 0.27
SEC13-208ENST00000397109 IL31RAQ8NI17 732 aa16.73■□□□□ 0.27
SEC13-208ENST00000397109 BADQ92934 168 aa16.73■□□□□ 0.27
SEC13-208ENST00000397109 EMID1Q96A84 441 aaPredicted RBP16.73■□□□□ 0.27
SEC13-208ENST00000397109 V9GY48 417 aaPredicted RBP16.73■□□□□ 0.27
SEC13-208ENST00000397109 RANBP2P49792 3224 aaKnown RBP16.73■□□□□ 0.27
SEC13-208ENST00000397109 GRIN2DO15399 1336 aa16.73■□□□□ 0.27
SEC13-208ENST00000397109 RGS20O76081 388 aa16.73■□□□□ 0.27
SEC13-208ENST00000397109 CDC27P30260 824 aa16.73■□□□□ 0.27
SEC13-208ENST00000397109 ADD1P35611 737 aaKnown RBP16.73■□□□□ 0.27
SEC13-208ENST00000397109 RBM25P49756 843 aaKnown RBP16.73■□□□□ 0.27
SEC13-208ENST00000397109 PPP1R18Q6NYC8 613 aa16.73■□□□□ 0.27
SEC13-208ENST00000397109 DHX37Q8IY37 1157 aaKnown RBP16.73■□□□□ 0.27
SEC13-208ENST00000397109 AFG1LQ8WV93 481 aa16.73■□□□□ 0.27
SEC13-208ENST00000397109 GLT8D2Q9H1C3 349 aa16.73■□□□□ 0.27
SEC13-208ENST00000397109 DAXXQ9UER7 740 aaPredicted RBP16.73■□□□□ 0.27
SEC13-208ENST00000397109 TBX21Q9UL17 535 aa16.73■□□□□ 0.27
SEC13-208ENST00000397109 NID2Q14112 1375 aa16.72■□□□□ 0.27
SEC13-208ENST00000397109 SLC34A2O95436 690 aa16.72■□□□□ 0.27
SEC13-208ENST00000397109 TIMP1P01033 207 aa16.72■□□□□ 0.27
SEC13-208ENST00000397109 CD4P01730 458 aa16.72■□□□□ 0.27
SEC13-208ENST00000397109 NAPAP54920 295 aa16.72■□□□□ 0.27
SEC13-208ENST00000397109 EVCP57679 992 aa16.72■□□□□ 0.27
SEC13-208ENST00000397109 BECN1Q14457 450 aa16.72■□□□□ 0.27
SEC13-208ENST00000397109 PCNX4Q63HM2 1172 aa16.72■□□□□ 0.27
SEC13-208ENST00000397109 GPKOWQ92917 476 aaPredicted RBP eCLIP16.72■□□□□ 0.274e-7■□□□□ 8.6
SEC13-208ENST00000397109 C22orf23Q9BZE7 217 aa16.72■□□□□ 0.27
SEC13-208ENST00000397109 EHMT1Q9H9B1 1298 aa16.72■□□□□ 0.27
SEC13-208ENST00000397109 LTBP2Q14767 1821 aa16.72■□□□□ 0.27
SEC13-208ENST00000397109 SCN10AQ9Y5Y9 1956 aa16.71■□□□□ 0.27
SEC13-208ENST00000397109 SPDYE3A6NKU9 549 aa16.71■□□□□ 0.27
SEC13-208ENST00000397109 MMP3P08254 477 aa16.71■□□□□ 0.27
SEC13-208ENST00000397109 SUPT20HL2P0C7V6 817 aa16.71■□□□□ 0.27
SEC13-208ENST00000397109 ICAM3P32942 547 aa16.71■□□□□ 0.27
SEC13-208ENST00000397109 PSMC6P62333 389 aa16.71■□□□□ 0.27
SEC13-208ENST00000397109 MRPS9P82933 396 aaKnown RBP16.71■□□□□ 0.27
SEC13-208ENST00000397109 DGKDQ16760 1214 aa16.71■□□□□ 0.27
SEC13-208ENST00000397109 LRIT3Q3SXY7 679 aa16.71■□□□□ 0.27
SEC13-208ENST00000397109 WWC2Q6AWC2 1192 aa16.71■□□□□ 0.27
SEC13-208ENST00000397109 PPTC7Q8NI37 304 aa16.71■□□□□ 0.27
SEC13-208ENST00000397109 INPP4AQ96PE3 977 aaPredicted RBP16.71■□□□□ 0.27
SEC13-208ENST00000397109 BARHL2Q9NY43 387 aa16.71■□□□□ 0.27
SEC13-208ENST00000397109 MYH7BA7E2Y1 1941 aa16.71■□□□□ 0.26
SEC13-208ENST00000397109 ITGB8P26012 769 aa16.7■□□□□ 0.26
SEC13-208ENST00000397109 AKAP17AQ02040 695 aaKnown RBP16.7■□□□□ 0.26
SEC13-208ENST00000397109 PTPN11Q06124 597 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms