RNA–Protein interactions for RNA: ENST00000396966.6

SCNN1A-205, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3 BASIC

Gene SCNN1A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-205ENST00000396966 C9orf131Q5VYM1 1079 aa19.25■□□□□ 0.67
SCNN1A-205ENST00000396966 E4F1Q66K89 784 aaPredicted RBP19.25■□□□□ 0.67
SCNN1A-205ENST00000396966 FCHSD1Q86WN1 690 aa19.25■□□□□ 0.67
SCNN1A-205ENST00000396966 KLRG1Q96E93 195 aa19.25■□□□□ 0.67
SCNN1A-205ENST00000396966 KCNMB3Q9NPA1 279 aa19.25■□□□□ 0.67
SCNN1A-205ENST00000396966 EMILIN3Q9NT22 766 aa19.25■□□□□ 0.67
SCNN1A-205ENST00000396966 CCPG1Q9ULG6 757 aa19.25■□□□□ 0.67
SCNN1A-205ENST00000396966 TBX3O15119 743 aa19.24■□□□□ 0.67
SCNN1A-205ENST00000396966 CYP3A4P08684 503 aa19.24■□□□□ 0.67
SCNN1A-205ENST00000396966 VCAM1P19320 739 aa19.24■□□□□ 0.67
SCNN1A-205ENST00000396966 ZNF76P36508 570 aa19.24■□□□□ 0.67
SCNN1A-205ENST00000396966 SNX29Q8TEQ0 813 aa19.24■□□□□ 0.67
SCNN1A-205ENST00000396966 DCPSQ96C86 337 aaKnown RBP19.24■□□□□ 0.67
SCNN1A-205ENST00000396966 STK17AQ9UEE5 414 aa19.24■□□□□ 0.67
SCNN1A-205ENST00000396966 CTDP1Q9Y5B0 961 aaPredicted RBP19.24■□□□□ 0.67
SCNN1A-205ENST00000396966 FLOT1O75955 427 aa19.24■□□□□ 0.67
SCNN1A-205ENST00000396966 CIITAP33076 1130 aa19.24■□□□□ 0.67
SCNN1A-205ENST00000396966 NAA30Q147X3 362 aaPredicted RBP19.24■□□□□ 0.67
SCNN1A-205ENST00000396966 PRR16Q569H4 304 aa19.24■□□□□ 0.67
SCNN1A-205ENST00000396966 CBFA2T2O43439 604 aa19.23■□□□□ 0.67
SCNN1A-205ENST00000396966 ZNF658Q5TYW1 1059 aaPredicted RBP19.23■□□□□ 0.67
SCNN1A-205ENST00000396966 ANKRD7Q92527 254 aa19.23■□□□□ 0.67
SCNN1A-205ENST00000396966 CCDC47Q96A33 483 aaKnown RBP19.23■□□□□ 0.67
SCNN1A-205ENST00000396966 RPAP3Q9H6T3 665 aaPredicted RBP19.23■□□□□ 0.67
SCNN1A-205ENST00000396966 PNMA2Q9UL42 364 aa19.23■□□□□ 0.67
SCNN1A-205ENST00000396966 SSC5DA1L4H1 1573 aa19.23■□□□□ 0.67
SCNN1A-205ENST00000396966 C19orf81C9J6K1 198 aa19.23■□□□□ 0.67
SCNN1A-205ENST00000396966 FDX1P10109 184 aa19.23■□□□□ 0.67
SCNN1A-205ENST00000396966 NCBP1Q09161 790 aaKnown RBP19.23■□□□□ 0.67
SCNN1A-205ENST00000396966 GRB10Q13322 594 aa19.23■□□□□ 0.67
SCNN1A-205ENST00000396966 DGKZQ13574 1117 aa19.23■□□□□ 0.67
SCNN1A-205ENST00000396966 KCNB1Q14721 858 aa19.23■□□□□ 0.67
SCNN1A-205ENST00000396966 DPY19L2Q6NUT2 758 aa19.23■□□□□ 0.67
SCNN1A-205ENST00000396966 TRMT44Q8IYL2 757 aaKnown RBP19.23■□□□□ 0.67
SCNN1A-205ENST00000396966 PDCL2Q8N4E4 241 aa19.23■□□□□ 0.67
SCNN1A-205ENST00000396966 KCND1Q9NSA2 647 aa19.23■□□□□ 0.67
SCNN1A-205ENST00000396966 PPP1R9AQ9ULJ8 1098 aa19.23■□□□□ 0.67
SCNN1A-205ENST00000396966 FZD1Q9UP38 647 aa19.23■□□□□ 0.67
SCNN1A-205ENST00000396966 ZHX2Q9Y6X8 837 aa19.23■□□□□ 0.67
SCNN1A-205ENST00000396966 COL11A1P12107 1806 aaPredicted RBP19.22■□□□□ 0.67
SCNN1A-205ENST00000396966 KDM3AQ9Y4C1 1321 aa19.22■□□□□ 0.67
SCNN1A-205ENST00000396966 NOL9Q5SY16 702 aaKnown RBP19.22■□□□□ 0.67
SCNN1A-205ENST00000396966 SV2BQ7L1I2 683 aa19.22■□□□□ 0.67
SCNN1A-205ENST00000396966 TBC1D5Q92609 795 aa19.22■□□□□ 0.67
SCNN1A-205ENST00000396966 AGBL1Q96MI9 1066 aa19.22■□□□□ 0.67
SCNN1A-205ENST00000396966 CCDC94Q9BW85 323 aaPredicted RBP19.22■□□□□ 0.67
SCNN1A-205ENST00000396966 SLC38A10Q9HBR0 1119 aa19.22■□□□□ 0.67
SCNN1A-205ENST00000396966 ZNF536O15090 1300 aa19.22■□□□□ 0.67
SCNN1A-205ENST00000396966 WDR90Q96KV7 1748 aa19.22■□□□□ 0.67
SCNN1A-205ENST00000396966 SLC26A4O43511 780 aa19.22■□□□□ 0.67
SCNN1A-205ENST00000396966 ZBED4O75132 1171 aa19.22■□□□□ 0.67
SCNN1A-205ENST00000396966 GOLGA8FQ08AF8 430 aa19.22■□□□□ 0.67
SCNN1A-205ENST00000396966 GOLGA8DPQ0D2H9 430 aa19.22■□□□□ 0.67
SCNN1A-205ENST00000396966 MCF2L2Q86YR7 1114 aa19.22■□□□□ 0.67
SCNN1A-205ENST00000396966 SULF1Q8IWU6 871 aa19.22■□□□□ 0.67
SCNN1A-205ENST00000396966 LRRC15Q8TF66 581 aa19.22■□□□□ 0.67
SCNN1A-205ENST00000396966 FAM20AQ96MK3 541 aa19.22■□□□□ 0.67
SCNN1A-205ENST00000396966 PNMA5Q96PV4 448 aa19.22■□□□□ 0.67
SCNN1A-205ENST00000396966 NFE2L3Q9Y4A8 694 aa19.22■□□□□ 0.67
SCNN1A-205ENST00000396966 NRDCO43847 1150 aa19.21■□□□□ 0.67
SCNN1A-205ENST00000396966 KLHL10Q6JEL2 608 aa19.21■□□□□ 0.67
SCNN1A-205ENST00000396966 ETNPPLQ8TBG4 499 aa19.21■□□□□ 0.67
SCNN1A-205ENST00000396966 GJA10Q969M2 543 aa19.21■□□□□ 0.67
SCNN1A-205ENST00000396966 PPP1R13BQ96KQ4 1090 aa19.21■□□□□ 0.67
SCNN1A-205ENST00000396966 MED15Q96RN5 788 aa19.21■□□□□ 0.67
SCNN1A-205ENST00000396966 C7orf25Q9BPX7 421 aa19.21■□□□□ 0.67
SCNN1A-205ENST00000396966 NT5C3AQ9H0P0 336 aa19.21■□□□□ 0.67
SCNN1A-205ENST00000396966 SYNRGQ9UMZ2 1314 aa19.21■□□□□ 0.67
SCNN1A-205ENST00000396966 PPP1R3GB7ZBB8 358 aa19.2■□□□□ 0.66
SCNN1A-205ENST00000396966 FAM86B1E9PN63 330 aa19.2■□□□□ 0.66
SCNN1A-205ENST00000396966 FAM86B2P0C5J1 330 aa19.2■□□□□ 0.66
SCNN1A-205ENST00000396966 CD44P16070 742 aaKnown RBP19.2■□□□□ 0.66
SCNN1A-205ENST00000396966 VSTM4Q8IW00 320 aa19.2■□□□□ 0.66
SCNN1A-205ENST00000396966 CPXCR1Q8N123 301 aa19.2■□□□□ 0.66
SCNN1A-205ENST00000396966 LARP4BQ92615 738 aaKnown RBP19.2■□□□□ 0.66
SCNN1A-205ENST00000396966 C12orf42Q96LP6 360 aa19.2■□□□□ 0.66
SCNN1A-205ENST00000396966 LRRC27Q9C0I9 530 aa19.2■□□□□ 0.66
SCNN1A-205ENST00000396966 STK24Q9Y6E0 443 aa19.2■□□□□ 0.66
SCNN1A-205ENST00000396966 RLFQ13129 1914 aa19.2■□□□□ 0.66
SCNN1A-205ENST00000396966 KMT5BQ4FZB7 885 aa19.2■□□□□ 0.66
SCNN1A-205ENST00000396966 SMYD4Q8IYR2 804 aaPredicted RBP19.2■□□□□ 0.66
SCNN1A-205ENST00000396966 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.2■□□□□ 0.66
SCNN1A-205ENST00000396966 KIF18AQ8NI77 898 aa19.2■□□□□ 0.66
SCNN1A-205ENST00000396966 GTPBP4Q9BZE4 634 aaKnown RBP19.2■□□□□ 0.66
SCNN1A-205ENST00000396966 TRIM9Q9C026 710 aa19.2■□□□□ 0.66
SCNN1A-205ENST00000396966 INTS13Q9NVM9 706 aa19.2■□□□□ 0.66
SCNN1A-205ENST00000396966 RABGAP1Q9Y3P9 1069 aa19.2■□□□□ 0.66
SCNN1A-205ENST00000396966 OTOFQ9HC10 1997 aa19.2■□□□□ 0.66
SCNN1A-205ENST00000396966 USP2O75604 605 aaPredicted RBP19.19■□□□□ 0.66
SCNN1A-205ENST00000396966 CDK11BP21127 795 aaKnown RBP19.19■□□□□ 0.66
SCNN1A-205ENST00000396966 CCT6AP40227 531 aaKnown RBP19.19■□□□□ 0.66
SCNN1A-205ENST00000396966 PRKG1Q13976 671 aa19.19■□□□□ 0.66
SCNN1A-205ENST00000396966 DHX8Q14562 1220 aaKnown RBP19.19■□□□□ 0.66
SCNN1A-205ENST00000396966 TMEM119Q4V9L6 283 aa19.19■□□□□ 0.66
SCNN1A-205ENST00000396966 SPATA1Q5VX52 437 aa19.19■□□□□ 0.66
SCNN1A-205ENST00000396966 LENG9Q96B70 501 aa19.19■□□□□ 0.66
SCNN1A-205ENST00000396966 RAVER2Q9HCJ3 691 aaKnown RBP19.19■□□□□ 0.66
SCNN1A-205ENST00000396966 BLOC1S4Q9NUP1 217 aa19.19■□□□□ 0.66
SCNN1A-205ENST00000396966 TMOD4Q9NZQ9 345 aa19.19■□□□□ 0.66
SCNN1A-205ENST00000396966 KLRC4O43908 158 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms