RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 CEP55Q53EZ4 464 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 CEP78Q5JTW2 689 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 ALS2CLQ60I27 953 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 CEP85Q6P2H3 762 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 TRAF7Q6Q0C0 670 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 SNX19Q92543 992 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 FMO2Q99518 471 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 ZC3H12CQ9C0D7 883 aaKnown RBP11.16□□□□□ -0.62
COL4A4-201ENST00000396625 CCDC90BQ9GZT6 254 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 ABCF3Q9NUQ8 709 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 ARHGEF11O15085 1522 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 HSPA6P17066 643 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 HACD3Q9P035 362 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 MKL2Q9ULH7 1088 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 MYL7Q01449 175 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 THOC5Q13769 683 aaKnown RBP11.16□□□□□ -0.62
COL4A4-201ENST00000396625 LRRC8BQ6P9F7 803 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 SUN2Q9UH99 717 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 NBPF9Q3BBW0 867 aa11.15□□□□□ -0.62
COL4A4-201ENST00000396625 MAGOHBQ96A72 148 aaKnown RBP11.15□□□□□ -0.62
COL4A4-201ENST00000396625 MDM2Q00987 491 aaPredicted RBP11.15□□□□□ -0.62
COL4A4-201ENST00000396625 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.15□□□□□ -0.62
COL4A4-201ENST00000396625 PCDHB4Q9Y5E5 795 aa11.15□□□□□ -0.62
COL4A4-201ENST00000396625 LAMC3Q9Y6N6 1575 aa11.15□□□□□ -0.62
COL4A4-201ENST00000396625 PHLPP2Q6ZVD8 1323 aa11.15□□□□□ -0.62
COL4A4-201ENST00000396625 RIMBP2O15034 1052 aa11.15□□□□□ -0.62
COL4A4-201ENST00000396625 SYCP2Q9BX26 1530 aa11.15□□□□□ -0.62
COL4A4-201ENST00000396625 PGRMC1O00264 195 aaKnown RBP11.15□□□□□ -0.62
COL4A4-201ENST00000396625 MORF4L2Q15014 288 aa11.15□□□□□ -0.62
COL4A4-201ENST00000396625 ZCRB1Q8TBF4 217 aaKnown RBP11.15□□□□□ -0.62
COL4A4-201ENST00000396625 ZNF263O14978 683 aa11.15□□□□□ -0.62
COL4A4-201ENST00000396625 DENND2AQ9ULE3 1009 aa11.15□□□□□ -0.62
COL4A4-201ENST00000396625 A0A0G2JND7 137 aa11.15□□□□□ -0.62
COL4A4-201ENST00000396625 VCAM1P19320 739 aa11.15□□□□□ -0.62
COL4A4-201ENST00000396625 SLC9A1P19634 815 aa11.15□□□□□ -0.62
COL4A4-201ENST00000396625 GLG1Q92896 1179 aa11.15□□□□□ -0.62
COL4A4-201ENST00000396625 EXOC4Q96A65 974 aa11.15□□□□□ -0.62
COL4A4-201ENST00000396625 TRIM11Q96F44 468 aa11.15□□□□□ -0.62
COL4A4-201ENST00000396625 ATP5HO75947 161 aa11.15□□□□□ -0.63
COL4A4-201ENST00000396625 PLTPP55058 493 aa11.15□□□□□ -0.63
COL4A4-201ENST00000396625 DIS3L2Q8IYB7 885 aaKnown RBP11.15□□□□□ -0.63
COL4A4-201ENST00000396625 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.15□□□□□ -0.63
COL4A4-201ENST00000396625 H0YCG3 227 aa11.15□□□□□ -0.63
COL4A4-201ENST00000396625 ZNF500O60304 480 aaPredicted RBP11.15□□□□□ -0.63
COL4A4-201ENST00000396625 POLR2FP61218 127 aaKnown RBP11.15□□□□□ -0.63
COL4A4-201ENST00000396625 HIBCHQ6NVY1 386 aaPredicted RBP11.15□□□□□ -0.63
COL4A4-201ENST00000396625 ZSCAN9O15535 394 aaPredicted RBP11.14□□□□□ -0.63
COL4A4-201ENST00000396625 PTPREP23469 700 aa11.14□□□□□ -0.63
COL4A4-201ENST00000396625 GFM2Q969S9 779 aaKnown RBP11.14□□□□□ -0.63
COL4A4-201ENST00000396625 ZMYM4Q5VZL5 1548 aa11.14□□□□□ -0.63
COL4A4-201ENST00000396625 ICE2Q659A1 982 aa11.14□□□□□ -0.63
COL4A4-201ENST00000396625 HAUS4Q9H6D7 363 aa11.14□□□□□ -0.63
COL4A4-201ENST00000396625 MRPL40Q9NQ50 206 aaKnown RBP11.14□□□□□ -0.63
COL4A4-201ENST00000396625 KIAA1468Q9P260 1216 aa11.14□□□□□ -0.63
COL4A4-201ENST00000396625 ZFP69BQ9UJL9 534 aa11.14□□□□□ -0.63
COL4A4-201ENST00000396625 MAGEA9P43362 315 aa11.14□□□□□ -0.63
COL4A4-201ENST00000396625 HIF1AQ16665 826 aa11.14□□□□□ -0.63
COL4A4-201ENST00000396625 PPHLN1Q8NEY8 458 aaKnown RBP11.14□□□□□ -0.63
COL4A4-201ENST00000396625 B4GALNT2Q8NHY0 566 aa11.14□□□□□ -0.63
COL4A4-201ENST00000396625 EXT2Q93063 718 aa11.14□□□□□ -0.63
COL4A4-201ENST00000396625 EYA3Q99504 573 aa11.14□□□□□ -0.63
COL4A4-201ENST00000396625 TPCN1Q9ULQ1 816 aa11.14□□□□□ -0.63
COL4A4-201ENST00000396625 G3BP2Q9UN86 482 aaKnown RBP11.14□□□□□ -0.63
COL4A4-201ENST00000396625 SESN1Q9Y6P5 492 aa11.14□□□□□ -0.63
COL4A4-201ENST00000396625 TMCC1O94876 653 aa11.14□□□□□ -0.63
COL4A4-201ENST00000396625 MESDQ14696 234 aa11.14□□□□□ -0.63
COL4A4-201ENST00000396625 ZYXQ15942 572 aaKnown RBP11.14□□□□□ -0.63
COL4A4-201ENST00000396625 CAPRIN2Q6IMN6 1127 aaKnown RBP11.14□□□□□ -0.63
COL4A4-201ENST00000396625 ZBTB8OSQ8IWT0 167 aa11.14□□□□□ -0.63
COL4A4-201ENST00000396625 STAMQ92783 540 aa11.14□□□□□ -0.63
COL4A4-201ENST00000396625 ACSL3O95573 720 aa11.14□□□□□ -0.63
COL4A4-201ENST00000396625 RARS2Q5T160 578 aaKnown RBP11.14□□□□□ -0.63
COL4A4-201ENST00000396625 ZMYND12Q9H0C1 365 aa11.14□□□□□ -0.63
COL4A4-201ENST00000396625 FNDC3AQ9Y2H6 1198 aaKnown RBP11.14□□□□□ -0.63
COL4A4-201ENST00000396625 KCNA1Q09470 495 aa11.14□□□□□ -0.63
COL4A4-201ENST00000396625 DARS2Q6PI48 645 aaKnown RBP11.14□□□□□ -0.63
COL4A4-201ENST00000396625 METTL14Q9HCE5 456 aaKnown RBP11.14□□□□□ -0.63
COL4A4-201ENST00000396625 AATFQ9NY61 560 aaKnown RBP eCLIP11.14□□□□□ -0.63
COL4A4-201ENST00000396625 ENC1O14682 589 aa11.14□□□□□ -0.63
COL4A4-201ENST00000396625 TAC1P20366 129 aa11.14□□□□□ -0.63
COL4A4-201ENST00000396625 S100A5P33763 92 aa11.14□□□□□ -0.63
COL4A4-201ENST00000396625 DYNLT1P63172 113 aa11.14□□□□□ -0.63
COL4A4-201ENST00000396625 BASP1P80723 227 aaKnown RBP11.14□□□□□ -0.63
COL4A4-201ENST00000396625 BBS5Q8N3I7 341 aa11.14□□□□□ -0.63
COL4A4-201ENST00000396625 OSBPL1AQ9BXW6 950 aa11.14□□□□□ -0.63
COL4A4-201ENST00000396625 SLC38A10Q9HBR0 1119 aa11.14□□□□□ -0.63
COL4A4-201ENST00000396625 ADGBQ8N7X0 1667 aa11.14□□□□□ -0.63
COL4A4-201ENST00000396625 WDR7Q9Y4E6 1490 aa11.14□□□□□ -0.63
COL4A4-201ENST00000396625 IQANK1A0A1B0GTG1 560 aa11.13□□□□□ -0.63
COL4A4-201ENST00000396625 PJA2O43164 708 aa11.13□□□□□ -0.63
COL4A4-201ENST00000396625 FSCBQ5H9T9 825 aa11.13□□□□□ -0.63
COL4A4-201ENST00000396625 MYL10Q9BUA6 226 aa11.13□□□□□ -0.63
COL4A4-201ENST00000396625 ATG3Q9NT62 314 aa11.13□□□□□ -0.63
COL4A4-201ENST00000396625 ARHGEF16Q5VV41 709 aa11.13□□□□□ -0.63
COL4A4-201ENST00000396625 SLFN12Q8IYM2 578 aa11.13□□□□□ -0.63
COL4A4-201ENST00000396625 ARMT1Q9H993 441 aa11.13□□□□□ -0.63
COL4A4-201ENST00000396625 KCNJ14Q9UNX9 436 aa11.13□□□□□ -0.63
COL4A4-201ENST00000396625 EPN1Q9Y6I3 576 aaPredicted RBP11.13□□□□□ -0.63
COL4A4-201ENST00000396625 BIVM-ERCC5R4GMW8 1640 aa11.13□□□□□ -0.63
COL4A4-201ENST00000396625 MOCS3O95396 460 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms