RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 SRRM1Q8IYB3 904 aaKnown RBP17.07■□□□□ 0.32
GNE-202ENST00000396594 SDR42E1Q8WUS8 393 aa17.07■□□□□ 0.32
GNE-202ENST00000396594 PBKQ96KB5 322 aa17.07■□□□□ 0.32
GNE-202ENST00000396594 TBC1D22BQ9NU19 505 aa17.07■□□□□ 0.32
GNE-202ENST00000396594 PHLDB2Q86SQ0 1253 aa17.07■□□□□ 0.32
GNE-202ENST00000396594 MCPH1Q8NEM0 835 aa17.07■□□□□ 0.32
GNE-202ENST00000396594 PPP4R1Q8TF05 950 aa17.07■□□□□ 0.32
GNE-202ENST00000396594 FAM20AQ96MK3 541 aa17.07■□□□□ 0.32
GNE-202ENST00000396594 TTC1Q99614 292 aa17.07■□□□□ 0.32
GNE-202ENST00000396594 HOXC10Q9NYD6 342 aa17.07■□□□□ 0.32
GNE-202ENST00000396594 PIM2Q9P1W9 311 aa17.07■□□□□ 0.32
GNE-202ENST00000396594 SEL1LQ9UBV2 794 aa17.07■□□□□ 0.32
GNE-202ENST00000396594 CAPN9O14815 690 aa17.07■□□□□ 0.32
GNE-202ENST00000396594 CDC42EP1Q00587 391 aa17.07■□□□□ 0.32
GNE-202ENST00000396594 MYO1EQ12965 1108 aa17.07■□□□□ 0.32
GNE-202ENST00000396594 DPP9Q86TI2 863 aa17.07■□□□□ 0.32
GNE-202ENST00000396594 LRRC47Q8N1G4 583 aaKnown RBP17.07■□□□□ 0.32
GNE-202ENST00000396594 TTLL11Q8NHH1 800 aa17.07■□□□□ 0.32
GNE-202ENST00000396594 ZNF500O60304 480 aaPredicted RBP17.07■□□□□ 0.32
GNE-202ENST00000396594 PIK3CAP42336 1068 aa17.07■□□□□ 0.32
GNE-202ENST00000396594 KIF23Q02241 960 aaPredicted RBP17.07■□□□□ 0.32
GNE-202ENST00000396594 RSRC1Q96IZ7 334 aaKnown RBP17.07■□□□□ 0.32
GNE-202ENST00000396594 INO80Q9ULG1 1556 aaPredicted RBP17.07■□□□□ 0.32
GNE-202ENST00000396594 MNAT1P51948 309 aa17.06■□□□□ 0.32
GNE-202ENST00000396594 AP3M2P53677 418 aa17.06■□□□□ 0.32
GNE-202ENST00000396594 TPD52P55327 224 aaPredicted RBP17.06■□□□□ 0.32
GNE-202ENST00000396594 TKFCQ3LXA3 575 aa17.06■□□□□ 0.32
GNE-202ENST00000396594 EAPPQ56P03 285 aaPredicted RBP17.06■□□□□ 0.32
GNE-202ENST00000396594 PAGR1Q9BTK6 254 aa17.06■□□□□ 0.32
GNE-202ENST00000396594 PPP1R12CQ9BZL4 782 aa17.06■□□□□ 0.32
GNE-202ENST00000396594 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.06■□□□□ 0.32
GNE-202ENST00000396594 RGL2O15211 777 aa17.06■□□□□ 0.32
GNE-202ENST00000396594 PIGBQ92521 554 aa17.06■□□□□ 0.32
GNE-202ENST00000396594 CCNE1P24864 410 aa17.06■□□□□ 0.32
GNE-202ENST00000396594 RASA3Q14644 834 aa17.06■□□□□ 0.32
GNE-202ENST00000396594 FNBP4Q8N3X1 1017 aaPredicted RBP17.06■□□□□ 0.32
GNE-202ENST00000396594 RIPOR2Q9Y4F9 1068 aa17.06■□□□□ 0.32
GNE-202ENST00000396594 MECOMQ03112 1051 aa17.06■□□□□ 0.32
GNE-202ENST00000396594 ZNF449Q6P9G9 518 aa17.06■□□□□ 0.32
GNE-202ENST00000396594 ZNF512BQ96KM6 892 aaPredicted RBP17.06■□□□□ 0.32
GNE-202ENST00000396594 CYP2J2P51589 502 aa17.05■□□□□ 0.32
GNE-202ENST00000396594 KRT39Q6A163 491 aa17.05■□□□□ 0.32
GNE-202ENST00000396594 ARMCX2Q7L311 632 aa17.05■□□□□ 0.32
GNE-202ENST00000396594 TRIM62Q9BVG3 475 aa17.05■□□□□ 0.32
GNE-202ENST00000396594 KMT5AQ9NQR1 393 aa17.05■□□□□ 0.32
GNE-202ENST00000396594 A6NJR5 290 aa17.05■□□□□ 0.32
GNE-202ENST00000396594 SH3BP5O60239 455 aa17.05■□□□□ 0.32
GNE-202ENST00000396594 GRM1Q13255 1194 aa17.05■□□□□ 0.32
GNE-202ENST00000396594 NEDD9Q14511 834 aa17.05■□□□□ 0.32
GNE-202ENST00000396594 TYW1BQ6NUM6 668 aa17.05■□□□□ 0.32
GNE-202ENST00000396594 EFCAB13Q8IY85 973 aa17.05■□□□□ 0.32
GNE-202ENST00000396594 SEPT12Q8IYM1 358 aa17.05■□□□□ 0.32
GNE-202ENST00000396594 HAUS8Q9BT25 410 aa17.05■□□□□ 0.32
GNE-202ENST00000396594 ABCA6Q8N139 1617 aa17.05■□□□□ 0.32
GNE-202ENST00000396594 FRMPD2Q68DX3 1309 aaPredicted RBP17.05■□□□□ 0.32
GNE-202ENST00000396594 METTL13Q8N6R0 699 aa17.05■□□□□ 0.32
GNE-202ENST00000396594 POMGNT1Q8WZA1 660 aa17.05■□□□□ 0.32
GNE-202ENST00000396594 HERC5Q9UII4 1024 aaKnown RBP17.05■□□□□ 0.32
GNE-202ENST00000396594 BTBD18B2RXH4 712 aa17.05■□□□□ 0.32
GNE-202ENST00000396594 CYP21A2P08686 494 aa17.05■□□□□ 0.32
GNE-202ENST00000396594 PNPLA7Q6ZV29 1317 aa17.05■□□□□ 0.32
GNE-202ENST00000396594 ADD1P35611 737 aaKnown RBP17.05■□□□□ 0.32
GNE-202ENST00000396594 KRT76Q01546 638 aa17.05■□□□□ 0.32
GNE-202ENST00000396594 C2orf40Q9H1Z8 148 aa17.05■□□□□ 0.32
GNE-202ENST00000396594 SPOUT1Q5T280 376 aaKnown RBP17.04■□□□□ 0.32
GNE-202ENST00000396594 PALM2Q8IXS6 379 aa17.04■□□□□ 0.32
GNE-202ENST00000396594 CNOT6LQ96LI5 555 aaKnown RBP17.04■□□□□ 0.32
GNE-202ENST00000396594 PARVGQ9HBI0 331 aa17.04■□□□□ 0.32
GNE-202ENST00000396594 SCINQ9Y6U3 715 aa17.04■□□□□ 0.32
GNE-202ENST00000396594 ETF1P62495 437 aaKnown RBP17.04■□□□□ 0.32
GNE-202ENST00000396594 TSNAXIP1Q2TAA8 658 aa17.04■□□□□ 0.32
GNE-202ENST00000396594 LMNTD2Q8IXW0 634 aa17.04■□□□□ 0.32
GNE-202ENST00000396594 FAM186BQ8IYM0 893 aa17.04■□□□□ 0.32
GNE-202ENST00000396594 SLF1Q9BQI6 1058 aa17.04■□□□□ 0.32
GNE-202ENST00000396594 CEP152O94986 1710 aa17.04■□□□□ 0.32
GNE-202ENST00000396594 EVI5O60447 810 aa17.04■□□□□ 0.32
GNE-202ENST00000396594 DOK7Q18PE1 504 aa17.04■□□□□ 0.32
GNE-202ENST00000396594 ISCA1Q9BUE6 129 aa17.04■□□□□ 0.32
GNE-202ENST00000396594 GEN1Q17RS7 908 aa17.04■□□□□ 0.32
GNE-202ENST00000396594 USP17L2Q6R6M4 530 aa17.04■□□□□ 0.32
GNE-202ENST00000396594 SP8Q8IXZ3 490 aa17.04■□□□□ 0.32
GNE-202ENST00000396594 FAM207AQ9NSI2 230 aaPredicted RBP17.04■□□□□ 0.32
GNE-202ENST00000396594 PVALEFA0A1B0GWK0 134 aa17.03■□□□□ 0.32
GNE-202ENST00000396594 M0R2C6 588 aa17.03■□□□□ 0.32
GNE-202ENST00000396594 KRT12Q99456 494 aa17.03■□□□□ 0.32
GNE-202ENST00000396594 BLZF1Q9H2G9 400 aa17.03■□□□□ 0.32
GNE-202ENST00000396594 PPP2R2CQ9Y2T4 447 aa17.03■□□□□ 0.32
GNE-202ENST00000396594 EPN1Q9Y6I3 576 aaPredicted RBP17.03■□□□□ 0.32
GNE-202ENST00000396594 ZSCAN20P17040 1043 aaPredicted RBP17.03■□□□□ 0.32
GNE-202ENST00000396594 ABI1Q8IZP0 508 aa17.03■□□□□ 0.32
GNE-202ENST00000396594 TUBGCP2Q9BSJ2 902 aa17.03■□□□□ 0.32
GNE-202ENST00000396594 GABPAQ06546 454 aa17.03■□□□□ 0.32
GNE-202ENST00000396594 MORC4Q8TE76 937 aa17.03■□□□□ 0.32
GNE-202ENST00000396594 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.03■□□□□ 0.32
GNE-202ENST00000396594 LRRIQ4A6NIV6 560 aa17.03■□□□□ 0.32
GNE-202ENST00000396594 HNRNPDLO14979 420 aaKnown RBP17.03■□□□□ 0.32
GNE-202ENST00000396594 ATF2P15336 505 aa17.03■□□□□ 0.32
GNE-202ENST00000396594 ARHGAP44Q17R89 818 aa17.03■□□□□ 0.32
GNE-202ENST00000396594 BPIFA3Q9BQP9 254 aa17.03■□□□□ 0.32
GNE-202ENST00000396594 TUBB6Q9BUF5 446 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms