RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 SCLYQ96I15 445 aa21.21■□□□□ 0.99
FXN-203ENST00000396366 IL23AQ9NPF7 189 aa21.21■□□□□ 0.99
FXN-203ENST00000396366 MYH7BA7E2Y1 1941 aa21.21■□□□□ 0.99
FXN-203ENST00000396366 GCOM1H8Y6P7 765 aaPredicted RBP21.2■□□□□ 0.98
FXN-203ENST00000396366 SORBS3O60504 671 aa21.2■□□□□ 0.98
FXN-203ENST00000396366 KPNA6O60684 536 aa21.2■□□□□ 0.98
FXN-203ENST00000396366 PLEKHA8P1O95397 391 aa21.2■□□□□ 0.98
FXN-203ENST00000396366 MMP3P08254 477 aa21.2■□□□□ 0.98
FXN-203ENST00000396366 POLR2MP0CAP2 368 aa21.2■□□□□ 0.98
FXN-203ENST00000396366 PGM5Q15124 567 aa21.2■□□□□ 0.98
FXN-203ENST00000396366 RASIP1Q5U651 963 aa21.2■□□□□ 0.98
FXN-203ENST00000396366 VSIG10LQ86VR7 867 aa21.2■□□□□ 0.98
FXN-203ENST00000396366 SLC17A8Q8NDX2 589 aa21.2■□□□□ 0.98
FXN-203ENST00000396366 VWCEQ96DN2 955 aa21.2■□□□□ 0.98
FXN-203ENST00000396366 CDX2Q99626 313 aaPredicted RBP21.2■□□□□ 0.98
FXN-203ENST00000396366 MAP3K20Q9NYL2 800 aaKnown RBP21.2■□□□□ 0.98
FXN-203ENST00000396366 MRVI1Q9Y6F6 885 aa21.2■□□□□ 0.98
FXN-203ENST00000396366 CDH23Q9H251 3354 aa21.19■□□□□ 0.98
FXN-203ENST00000396366 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.19■□□□□ 0.98
FXN-203ENST00000396366 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.19■□□□□ 0.98
FXN-203ENST00000396366 DDAH1O94760 285 aa21.19■□□□□ 0.98
FXN-203ENST00000396366 SRBD1Q8N5C6 995 aaKnown RBP21.19■□□□□ 0.98
FXN-203ENST00000396366 CTCFLQ8NI51 663 aaPredicted RBP21.19■□□□□ 0.98
FXN-203ENST00000396366 KAT2BQ92831 832 aa21.19■□□□□ 0.98
FXN-203ENST00000396366 GPKOWQ92917 476 aaPredicted RBP eCLIP21.19■□□□□ 0.98
FXN-203ENST00000396366 CXXC1Q9P0U4 656 aaPredicted RBP21.19■□□□□ 0.98
FXN-203ENST00000396366 CCDC69A6NI79 296 aa21.18■□□□□ 0.98
FXN-203ENST00000396366 SP2Q02086 613 aa21.18■□□□□ 0.98
FXN-203ENST00000396366 NFRKBQ6P4R8 1299 aa21.18■□□□□ 0.98
FXN-203ENST00000396366 PSRC1Q6PGN9 363 aaPredicted RBP21.18■□□□□ 0.98
FXN-203ENST00000396366 TMEM87BQ96K49 555 aa21.18■□□□□ 0.98
FXN-203ENST00000396366 MAP3K14Q99558 947 aa21.18■□□□□ 0.98
FXN-203ENST00000396366 MTA3Q9BTC8 594 aa21.18■□□□□ 0.98
FXN-203ENST00000396366 hCG_1642624A0A1W2PR95 340 aa21.17■□□□□ 0.98
FXN-203ENST00000396366 RBAK-RBAKDNI3L0D1 243 aa21.17■□□□□ 0.98
FXN-203ENST00000396366 FGBP02675 491 aa21.17■□□□□ 0.98
FXN-203ENST00000396366 SUPT20HL2P0C7V6 817 aa21.17■□□□□ 0.98
FXN-203ENST00000396366 KIF5BP33176 963 aa21.17■□□□□ 0.98
FXN-203ENST00000396366 PBX2P40425 430 aa21.17■□□□□ 0.98
FXN-203ENST00000396366 TRAF1Q13077 416 aa21.17■□□□□ 0.98
FXN-203ENST00000396366 OTOP2Q7RTS6 562 aa21.17■□□□□ 0.98
FXN-203ENST00000396366 SAMD3Q8N6K7 520 aa21.17■□□□□ 0.98
FXN-203ENST00000396366 RRP36Q96EU6 259 aaKnown RBP21.17■□□□□ 0.98
FXN-203ENST00000396366 SPZ1Q9BXG8 430 aa21.17■□□□□ 0.98
FXN-203ENST00000396366 BCAS3Q9H6U6 928 aa21.17■□□□□ 0.98
FXN-203ENST00000396366 SCN5AQ14524 2016 aa21.17■□□□□ 0.98
FXN-203ENST00000396366 A0A0C4DFX4 3053 aa21.17■□□□□ 0.98
FXN-203ENST00000396366 LIFRP42702 1097 aa21.16■□□□□ 0.98
FXN-203ENST00000396366 DHX37Q8IY37 1157 aaKnown RBP21.16■□□□□ 0.98
FXN-203ENST00000396366 RASEFQ8IZ41 740 aa21.16■□□□□ 0.98
FXN-203ENST00000396366 TMTC2Q8N394 836 aa21.16■□□□□ 0.98
FXN-203ENST00000396366 CCDC82Q8N4S0 544 aa21.16■□□□□ 0.98
FXN-203ENST00000396366 HERVK_113Q902F9 699 aa21.16■□□□□ 0.98
FXN-203ENST00000396366 TCEANC2Q96MN5 208 aa21.16■□□□□ 0.98
FXN-203ENST00000396366 EYSQ5T1H1 3165 aa21.16■□□□□ 0.98
FXN-203ENST00000396366 CASTP20810 708 aaKnown RBP21.15■□□□□ 0.98
FXN-203ENST00000396366 DNAJB2P25686 324 aa21.15■□□□□ 0.98
FXN-203ENST00000396366 SMARCA1P28370 1054 aa21.15■□□□□ 0.98
FXN-203ENST00000396366 CCND2P30279 289 aa21.15■□□□□ 0.98
FXN-203ENST00000396366 MRPS9P82933 396 aaKnown RBP21.15■□□□□ 0.98
FXN-203ENST00000396366 LAMC2Q13753 1193 aa21.15■□□□□ 0.98
FXN-203ENST00000396366 DGKDQ16760 1214 aa21.15■□□□□ 0.98
FXN-203ENST00000396366 ADCK5Q3MIX3 580 aa21.15■□□□□ 0.98
FXN-203ENST00000396366 MYSM1Q5VVJ2 828 aa21.15■□□□□ 0.98
FXN-203ENST00000396366 USP17L6PQ6QN14 398 aa21.15■□□□□ 0.98
FXN-203ENST00000396366 MYLIPQ8WY64 445 aa21.15■□□□□ 0.98
FXN-203ENST00000396366 EMID1Q96A84 441 aaPredicted RBP21.15■□□□□ 0.98
FXN-203ENST00000396366 CTAGE1Q96RT6 745 aa21.15■□□□□ 0.98
FXN-203ENST00000396366 PBX4Q9BYU1 374 aa21.15■□□□□ 0.98
FXN-203ENST00000396366 SLC12A7Q9Y666 1083 aa21.15■□□□□ 0.98
FXN-203ENST00000396366 CHD9Q3L8U1 2897 aa21.15■□□□□ 0.98
FXN-203ENST00000396366 CDC45O75419 566 aa21.14■□□□□ 0.97
FXN-203ENST00000396366 ZNF286BP0CG31 522 aa21.14■□□□□ 0.97
FXN-203ENST00000396366 PTPN11Q06124 597 aaPredicted RBP21.14■□□□□ 0.97
FXN-203ENST00000396366 CELF3Q5SZQ8 465 aaKnown RBP21.14■□□□□ 0.97
FXN-203ENST00000396366 GDF6Q6KF10 455 aaPredicted RBP21.14■□□□□ 0.97
FXN-203ENST00000396366 DEFB128Q7Z7B8 93 aa21.14■□□□□ 0.97
FXN-203ENST00000396366 NEK1Q96PY6 1258 aa21.14■□□□□ 0.97
FXN-203ENST00000396366 LZTS2Q9BRK4 669 aa21.14■□□□□ 0.97
FXN-203ENST00000396366 ALG1Q9BT22 464 aa21.14■□□□□ 0.97
FXN-203ENST00000396366 RTEL1Q9NZ71 1219 aa21.14■□□□□ 0.97
FXN-203ENST00000396366 MEIS2O14770 477 aa21.13■□□□□ 0.97
FXN-203ENST00000396366 GGPS1O95749 300 aa21.13■□□□□ 0.97
FXN-203ENST00000396366 UBA1P22314 1058 aaKnown RBP21.13■□□□□ 0.97
FXN-203ENST00000396366 PSEN2P49810 448 aa21.13■□□□□ 0.97
FXN-203ENST00000396366 EXOSC10Q01780 885 aaKnown RBP21.13■□□□□ 0.97
FXN-203ENST00000396366 GRIN2CQ14957 1233 aa21.13■□□□□ 0.97
FXN-203ENST00000396366 PTGISQ16647 500 aa21.13■□□□□ 0.97
FXN-203ENST00000396366 HSDL1Q3SXM5 330 aa21.13■□□□□ 0.97
FXN-203ENST00000396366 FANCBQ8NB91 859 aa21.13■□□□□ 0.97
FXN-203ENST00000396366 PPTC7Q8NI37 304 aa21.13■□□□□ 0.97
FXN-203ENST00000396366 TIFAQ96CG3 184 aa21.13■□□□□ 0.97
FXN-203ENST00000396366 CCDC136Q96JN2 1154 aa21.13■□□□□ 0.97
FXN-203ENST00000396366 SEC63Q9UGP8 760 aaKnown RBP21.13■□□□□ 0.97
FXN-203ENST00000396366 TRIP12Q14669 1992 aaPredicted RBP21.13■□□□□ 0.97
FXN-203ENST00000396366 IQCF3P0C7M6 154 aa21.12■□□□□ 0.97
FXN-203ENST00000396366 CALM1P0DP23 149 aa21.12■□□□□ 0.97
FXN-203ENST00000396366 CALM2P0DP24 149 aa21.12■□□□□ 0.97
FXN-203ENST00000396366 CALM3P0DP25 149 aa21.12■□□□□ 0.97
FXN-203ENST00000396366 GNAQP50148 359 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms