RNA–Protein interactions for RNA: ENST00000396185.7

CTNNB1-203, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-203ENST00000396185 PDE4DQ08499 809 aa13.33□□□□□ -0.28
CTNNB1-203ENST00000396185 C6orf89Q6UWU4 347 aa13.33□□□□□ -0.28
CTNNB1-203ENST00000396185 GSPT2Q8IYD1 628 aaKnown RBP13.33□□□□□ -0.28
CTNNB1-203ENST00000396185 MYH10P35580 1976 aa13.33□□□□□ -0.28
CTNNB1-203ENST00000396185 CCDC194A0A1B0GVG4 234 aa13.33□□□□□ -0.28
CTNNB1-203ENST00000396185 ZNF233A6NK53 670 aa13.33□□□□□ -0.28
CTNNB1-203ENST00000396185 IPO7O95373 1038 aaKnown RBP13.33□□□□□ -0.28
CTNNB1-203ENST00000396185 FGFR1OPO95684 399 aaKnown RBP13.33□□□□□ -0.28
CTNNB1-203ENST00000396185 CYP27A1Q02318 531 aa13.33□□□□□ -0.28
CTNNB1-203ENST00000396185 MTMR8Q96EF0 704 aa13.33□□□□□ -0.28
CTNNB1-203ENST00000396185 CAPZA3Q96KX2 299 aa13.33□□□□□ -0.28
CTNNB1-203ENST00000396185 LY75O60449 1722 aa13.33□□□□□ -0.28
CTNNB1-203ENST00000396185 H0YGN5 161 aa13.32□□□□□ -0.28
CTNNB1-203ENST00000396185 TLR2O60603 784 aa13.32□□□□□ -0.28
CTNNB1-203ENST00000396185 EIF4A3P38919 411 aaKnown RBP13.32□□□□□ -0.28
CTNNB1-203ENST00000396185 TNNT3P45378 269 aaPredicted RBP13.32□□□□□ -0.28
CTNNB1-203ENST00000396185 SPDYCQ5MJ68 293 aa13.32□□□□□ -0.28
CTNNB1-203ENST00000396185 KCNV1Q6PIU1 500 aa13.32□□□□□ -0.28
CTNNB1-203ENST00000396185 CERS3Q8IU89 383 aa13.32□□□□□ -0.28
CTNNB1-203ENST00000396185 MICALL1Q8N3F8 863 aa13.32□□□□□ -0.28
CTNNB1-203ENST00000396185 WHAMMQ8TF30 809 aa13.32□□□□□ -0.28
CTNNB1-203ENST00000396185 ZIM3Q96PE6 472 aa13.32□□□□□ -0.28
CTNNB1-203ENST00000396185 THRAP3Q9Y2W1 955 aaKnown RBP13.32□□□□□ -0.28
CTNNB1-203ENST00000396185 NFS1Q9Y697 457 aa13.32□□□□□ -0.28
CTNNB1-203ENST00000396185 RBBP6Q7Z6E9 1792 aaKnown RBP13.32□□□□□ -0.28
CTNNB1-203ENST00000396185 LRRC53A6NM62 1247 aa13.32□□□□□ -0.28
CTNNB1-203ENST00000396185 PAEPP09466 180 aa13.32□□□□□ -0.28
CTNNB1-203ENST00000396185 ANXA13P27216 316 aa13.32□□□□□ -0.28
CTNNB1-203ENST00000396185 EVA1CP58658 441 aa13.32□□□□□ -0.28
CTNNB1-203ENST00000396185 ITPK1Q13572 414 aa13.32□□□□□ -0.28
CTNNB1-203ENST00000396185 INF2Q27J81 1249 aa13.32□□□□□ -0.28
CTNNB1-203ENST00000396185 FAM47AQ5JRC9 791 aa13.32□□□□□ -0.28
CTNNB1-203ENST00000396185 KRT26Q7Z3Y9 468 aa13.32□□□□□ -0.28
CTNNB1-203ENST00000396185 GPKOWQ92917 476 aaPredicted RBP eCLIP13.32□□□□□ -0.287e-6■□□□□ 10
CTNNB1-203ENST00000396185 CCDC47Q96A33 483 aaKnown RBP13.32□□□□□ -0.28
CTNNB1-203ENST00000396185 MLXIPQ9HAP2 919 aa13.32□□□□□ -0.28
CTNNB1-203ENST00000396185 JADE2Q9NQC1 790 aa13.32□□□□□ -0.28
CTNNB1-203ENST00000396185 RBM12Q9NTZ6 932 aaKnown RBP13.32□□□□□ -0.28
CTNNB1-203ENST00000396185 MOCS3O95396 460 aa13.32□□□□□ -0.28
CTNNB1-203ENST00000396185 DRP2Q13474 957 aa13.32□□□□□ -0.28
CTNNB1-203ENST00000396185 NFRKBQ6P4R8 1299 aa13.32□□□□□ -0.28
CTNNB1-203ENST00000396185 CEP63Q96MT8 703 aa13.32□□□□□ -0.28
CTNNB1-203ENST00000396185 EPN3Q9H201 632 aa13.32□□□□□ -0.28
CTNNB1-203ENST00000396185 RIOX1Q9H6W3 641 aa13.32□□□□□ -0.28
CTNNB1-203ENST00000396185 FRMD3A2A2Y4 597 aa13.31□□□□□ -0.28
CTNNB1-203ENST00000396185 WTIPA6NIX2 430 aaPredicted RBP13.31□□□□□ -0.28
CTNNB1-203ENST00000396185 CYP2D6P10635 497 aa13.31□□□□□ -0.28
CTNNB1-203ENST00000396185 CLK2P49760 499 aaKnown RBP13.31□□□□□ -0.28
CTNNB1-203ENST00000396185 CDC37Q16543 378 aaPredicted RBP13.31□□□□□ -0.28
CTNNB1-203ENST00000396185 SND1Q7KZF4 910 aaKnown RBP eCLIP13.31□□□□□ -0.288e-9■■■□□ 14.7
CTNNB1-203ENST00000396185 NEK8Q86SG6 692 aa13.31□□□□□ -0.28
CTNNB1-203ENST00000396185 IFT20Q8IY31 132 aa13.31□□□□□ -0.28
CTNNB1-203ENST00000396185 ARL8AQ96BM9 186 aa13.31□□□□□ -0.28
CTNNB1-203ENST00000396185 ABCF2Q9UG63 623 aa13.31□□□□□ -0.28
CTNNB1-203ENST00000396185 MACROD2A1Z1Q3 448 aa13.31□□□□□ -0.28
CTNNB1-203ENST00000396185 EBAG9O00559 213 aa13.31□□□□□ -0.28
CTNNB1-203ENST00000396185 SERPING1P05155 500 aa13.31□□□□□ -0.28
CTNNB1-203ENST00000396185 ITGB3BPQ13352 177 aaPredicted RBP13.31□□□□□ -0.28
CTNNB1-203ENST00000396185 NONOQ15233 471 aaKnown RBP eCLIP13.31□□□□□ -0.281e-8■■■□□ 17.3
CTNNB1-203ENST00000396185 CFAP221Q4G0U5 840 aa13.31□□□□□ -0.28
CTNNB1-203ENST00000396185 C10orf76Q5T2E6 689 aa13.31□□□□□ -0.28
CTNNB1-203ENST00000396185 B4GALNT4Q76KP1 1039 aa13.31□□□□□ -0.28
CTNNB1-203ENST00000396185 SMCR8Q8TEV9 937 aaPredicted RBP13.31□□□□□ -0.28
CTNNB1-203ENST00000396185 TACO1Q9BSH4 297 aaKnown RBP13.31□□□□□ -0.28
CTNNB1-203ENST00000396185 PLCB1Q9NQ66 1216 aa13.31□□□□□ -0.28
CTNNB1-203ENST00000396185 FBXL5Q9UKA1 691 aa13.31□□□□□ -0.28
CTNNB1-203ENST00000396185 MYH4Q9Y623 1939 aa13.31□□□□□ -0.28
CTNNB1-203ENST00000396185 MYMKA6NI61 221 aa13.31□□□□□ -0.28
CTNNB1-203ENST00000396185 ZMYND10O75800 440 aa13.31□□□□□ -0.28
CTNNB1-203ENST00000396185 PPP4R3AQ6IN85 833 aa13.31□□□□□ -0.28
CTNNB1-203ENST00000396185 RASGRP4Q8TDF6 673 aa13.31□□□□□ -0.28
CTNNB1-203ENST00000396185 DNAJC19Q96DA6 116 aa13.31□□□□□ -0.28
CTNNB1-203ENST00000396185 NOX5Q96PH1 765 aa13.31□□□□□ -0.28
CTNNB1-203ENST00000396185 GLI1P08151 1106 aa13.3□□□□□ -0.28
CTNNB1-203ENST00000396185 SNHG28P0DPA3 235 aa13.3□□□□□ -0.28
CTNNB1-203ENST00000396185 CCDC96Q2M329 555 aa13.3□□□□□ -0.28
CTNNB1-203ENST00000396185 SCFD2Q8WU76 684 aa13.3□□□□□ -0.28
CTNNB1-203ENST00000396185 RAD54LQ92698 747 aa13.3□□□□□ -0.28
CTNNB1-203ENST00000396185 LRRC27Q9C0I9 530 aa13.3□□□□□ -0.28
CTNNB1-203ENST00000396185 ANKRD2Q9GZV1 360 aa13.3□□□□□ -0.28
CTNNB1-203ENST00000396185 NIP7Q9Y221 180 aaKnown RBP eCLIP13.3□□□□□ -0.28
CTNNB1-203ENST00000396185 TSPY2A6NKD2 308 aa13.3□□□□□ -0.28
CTNNB1-203ENST00000396185 HMGB1P1B2RPK0 211 aaPredicted RBP13.3□□□□□ -0.28
CTNNB1-203ENST00000396185 MTIF2P46199 727 aaKnown RBP13.3□□□□□ -0.28
CTNNB1-203ENST00000396185 TFAP4Q01664 338 aa13.3□□□□□ -0.28
CTNNB1-203ENST00000396185 MCTP2Q6DN12 878 aa13.3□□□□□ -0.28
CTNNB1-203ENST00000396185 PPP1R18Q6NYC8 613 aa13.3□□□□□ -0.28
CTNNB1-203ENST00000396185 C16orf86Q6ZW13 317 aa13.3□□□□□ -0.28
CTNNB1-203ENST00000396185 C2CD5Q86YS7 1000 aa13.3□□□□□ -0.28
CTNNB1-203ENST00000396185 CAGE1Q8TC20 777 aa13.3□□□□□ -0.28
CTNNB1-203ENST00000396185 ACTRT1Q8TDG2 376 aa13.3□□□□□ -0.28
CTNNB1-203ENST00000396185 CALR3Q96L12 384 aaKnown RBP13.3□□□□□ -0.28
CTNNB1-203ENST00000396185 ZNF652Q9Y2D9 606 aa13.3□□□□□ -0.28
CTNNB1-203ENST00000396185 C5orf60A6NFR6 353 aa13.29□□□□□ -0.28
CTNNB1-203ENST00000396185 RASA1P20936 1047 aa13.29□□□□□ -0.28
CTNNB1-203ENST00000396185 SLC18A3Q16572 532 aa13.29□□□□□ -0.28
CTNNB1-203ENST00000396185 BCAS4Q8TDM0 211 aa13.29□□□□□ -0.28
CTNNB1-203ENST00000396185 TMEM47Q9BQJ4 181 aa13.29□□□□□ -0.28
CTNNB1-203ENST00000396185 CNTNAP4Q9C0A0 1308 aa13.29□□□□□ -0.28
CTNNB1-203ENST00000396185 LOC102724428A0A0B4J2F2 783 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms