RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 BCRP11274 1271 aa13.38□□□□□ -0.27
GTF2A2-202ENST00000396060 ALAS1P13196 640 aa13.38□□□□□ -0.27
GTF2A2-202ENST00000396060 PLCG1P19174 1290 aa13.38□□□□□ -0.27
GTF2A2-202ENST00000396060 ERCC5P28715 1186 aaPredicted RBP13.38□□□□□ -0.27
GTF2A2-202ENST00000396060 SPIRE1Q08AE8 756 aa13.38□□□□□ -0.27
GTF2A2-202ENST00000396060 KCNB1Q14721 858 aa13.38□□□□□ -0.27
GTF2A2-202ENST00000396060 CEP55Q53EZ4 464 aa13.38□□□□□ -0.27
GTF2A2-202ENST00000396060 PRR16Q569H4 304 aa13.38□□□□□ -0.27
GTF2A2-202ENST00000396060 XRRA1Q6P2D8 792 aa13.38□□□□□ -0.27
GTF2A2-202ENST00000396060 GRAMD1CQ8IYS0 662 aa13.38□□□□□ -0.27
GTF2A2-202ENST00000396060 MB21D1Q8N884 522 aa13.38□□□□□ -0.27
GTF2A2-202ENST00000396060 SYTL5Q8TDW5 730 aaPredicted RBP13.38□□□□□ -0.27
GTF2A2-202ENST00000396060 TRERF1Q96PN7 1200 aa13.38□□□□□ -0.27
GTF2A2-202ENST00000396060 PNMA5Q96PV4 448 aa13.38□□□□□ -0.27
GTF2A2-202ENST00000396060 C7orf25Q9BPX7 421 aa13.38□□□□□ -0.27
GTF2A2-202ENST00000396060 SPDYE16A6NNV3 312 aaPredicted RBP13.37□□□□□ -0.27
GTF2A2-202ENST00000396060 GOLGA6L19H0YKK7 550 aa13.37□□□□□ -0.27
GTF2A2-202ENST00000396060 MSH4O15457 936 aa13.37□□□□□ -0.27
GTF2A2-202ENST00000396060 MARCH6O60337 910 aa13.37□□□□□ -0.27
GTF2A2-202ENST00000396060 AFMP43652 599 aa13.37□□□□□ -0.27
GTF2A2-202ENST00000396060 FKBP1BP68106 108 aa13.37□□□□□ -0.27
GTF2A2-202ENST00000396060 AMPD3Q01432 767 aa13.37□□□□□ -0.27
GTF2A2-202ENST00000396060 NCAPHQ15003 741 aa13.37□□□□□ -0.27
GTF2A2-202ENST00000396060 HS1BP3Q53T59 392 aa13.37□□□□□ -0.27
GTF2A2-202ENST00000396060 EAPPQ56P03 285 aaPredicted RBP13.37□□□□□ -0.27
GTF2A2-202ENST00000396060 MUM1L1Q5H9M0 696 aa13.37□□□□□ -0.27
GTF2A2-202ENST00000396060 CPXCR1Q8N123 301 aa13.37□□□□□ -0.27
GTF2A2-202ENST00000396060 LRRC15Q8TF66 581 aa13.37□□□□□ -0.27
GTF2A2-202ENST00000396060 SLC5A5Q92911 643 aa13.37□□□□□ -0.27
GTF2A2-202ENST00000396060 TEX13BQ9BXU2 312 aa13.37□□□□□ -0.27
GTF2A2-202ENST00000396060 RMND1Q9NWS8 449 aa13.37□□□□□ -0.27
GTF2A2-202ENST00000396060 LOC285556D6RIA3 1793 aa13.37□□□□□ -0.27
GTF2A2-202ENST00000396060 KDM3AQ9Y4C1 1321 aa13.37□□□□□ -0.27
GTF2A2-202ENST00000396060 A0A087WWV3 80 aa13.37□□□□□ -0.27
GTF2A2-202ENST00000396060 BECN2A8MW95 431 aa13.37□□□□□ -0.27
GTF2A2-202ENST00000396060 AP5Z1O43299 807 aa13.37□□□□□ -0.27
GTF2A2-202ENST00000396060 ZNF76P36508 570 aa13.37□□□□□ -0.27
GTF2A2-202ENST00000396060 SETQ01105 290 aaPredicted RBP13.37□□□□□ -0.27
GTF2A2-202ENST00000396060 TMEM132BQ14DG7 1078 aa13.37□□□□□ -0.27
GTF2A2-202ENST00000396060 PCNX4Q63HM2 1172 aa13.37□□□□□ -0.27
GTF2A2-202ENST00000396060 WNK4Q96J92 1243 aa13.37□□□□□ -0.27
GTF2A2-202ENST00000396060 CLMNQ96JQ2 1002 aa13.37□□□□□ -0.27
GTF2A2-202ENST00000396060 LRRC27Q9C0I9 530 aa13.37□□□□□ -0.27
GTF2A2-202ENST00000396060 NT5C3AQ9H0P0 336 aa13.37□□□□□ -0.27
GTF2A2-202ENST00000396060 ELP3Q9H9T3 547 aa13.37□□□□□ -0.27
GTF2A2-202ENST00000396060 BLOC1S4Q9NUP1 217 aa13.37□□□□□ -0.27
GTF2A2-202ENST00000396060 COL20A1Q9P218 1284 aa13.37□□□□□ -0.27
GTF2A2-202ENST00000396060 POTEMA6NI47 508 aa13.36□□□□□ -0.27
GTF2A2-202ENST00000396060 PSMD10O75832 226 aa13.36□□□□□ -0.27
GTF2A2-202ENST00000396060 ADCY5O95622 1261 aa13.36□□□□□ -0.27
GTF2A2-202ENST00000396060 MUTP22033 750 aa13.36□□□□□ -0.27
GTF2A2-202ENST00000396060 STAT3P40763 770 aa13.36□□□□□ -0.27
GTF2A2-202ENST00000396060 RPS6P62753 249 aaKnown RBP13.36□□□□□ -0.27
GTF2A2-202ENST00000396060 CUL4BQ13620 913 aa13.36□□□□□ -0.27
GTF2A2-202ENST00000396060 MOGSQ13724 837 aa13.36□□□□□ -0.27
GTF2A2-202ENST00000396060 SAMD1Q6SPF0 538 aaPredicted RBP13.36□□□□□ -0.27
GTF2A2-202ENST00000396060 B3GNT9Q6UX72 402 aa13.36□□□□□ -0.27
GTF2A2-202ENST00000396060 RNF207Q6ZRF8 634 aa13.36□□□□□ -0.27
GTF2A2-202ENST00000396060 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.36□□□□□ -0.27
GTF2A2-202ENST00000396060 FASTKD5Q7L8L6 764 aaKnown RBP13.36□□□□□ -0.27
GTF2A2-202ENST00000396060 PLA2G4DQ86XP0 818 aa13.36□□□□□ -0.27
GTF2A2-202ENST00000396060 CHST13Q8NET6 341 aa13.36□□□□□ -0.27
GTF2A2-202ENST00000396060 ENOX1Q8TC92 643 aaKnown RBP13.36□□□□□ -0.27
GTF2A2-202ENST00000396060 SNX29Q8TEQ0 813 aa13.36□□□□□ -0.27
GTF2A2-202ENST00000396060 CNKSR2Q8WXI2 1034 aa13.36□□□□□ -0.27
GTF2A2-202ENST00000396060 MXRA8Q9BRK3 442 aa13.36□□□□□ -0.27
GTF2A2-202ENST00000396060 RNF146Q9NTX7 359 aa13.36□□□□□ -0.27
GTF2A2-202ENST00000396060 VAV3Q9UKW4 847 aa13.36□□□□□ -0.27
GTF2A2-202ENST00000396060 RIPK3Q9Y572 518 aa13.36□□□□□ -0.27
GTF2A2-202ENST00000396060 UBIAD1Q9Y5Z9 338 aa13.36□□□□□ -0.27
GTF2A2-202ENST00000396060 KLRC4O43908 158 aa13.35□□□□□ -0.27
GTF2A2-202ENST00000396060 RPN1P04843 607 aaKnown RBP13.35□□□□□ -0.27
GTF2A2-202ENST00000396060 PPP2R5CQ13362 524 aa13.35□□□□□ -0.27
GTF2A2-202ENST00000396060 TREML2Q5T2D2 321 aa13.35□□□□□ -0.27
GTF2A2-202ENST00000396060 SNRNP48Q6IEG0 339 aaKnown RBP13.35□□□□□ -0.27
GTF2A2-202ENST00000396060 SV2BQ7L1I2 683 aa13.35□□□□□ -0.27
GTF2A2-202ENST00000396060 AOPEPQ8N6M6 819 aa13.35□□□□□ -0.27
GTF2A2-202ENST00000396060 RASSF8Q8NHQ8 419 aa13.35□□□□□ -0.27
GTF2A2-202ENST00000396060 ERMNQ8TAM6 284 aa13.35□□□□□ -0.27
GTF2A2-202ENST00000396060 CYP2W1Q8TAV3 490 aa13.35□□□□□ -0.27
GTF2A2-202ENST00000396060 RAD54LQ92698 747 aa13.35□□□□□ -0.27
GTF2A2-202ENST00000396060 RIT2Q99578 217 aa13.35□□□□□ -0.27
GTF2A2-202ENST00000396060 NUDT12Q9BQG2 462 aa13.35□□□□□ -0.27
GTF2A2-202ENST00000396060 POLR3CQ9BUI4 534 aaPredicted RBP13.35□□□□□ -0.27
GTF2A2-202ENST00000396060 TRIM9Q9C026 710 aa13.35□□□□□ -0.27
GTF2A2-202ENST00000396060 AGTPBP1Q9UPW5 1226 aa13.35□□□□□ -0.27
GTF2A2-202ENST00000396060 COL11A1P12107 1806 aaPredicted RBP13.34□□□□□ -0.27
GTF2A2-202ENST00000396060 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.34□□□□□ -0.27
GTF2A2-202ENST00000396060 PVALEFA0A1B0GWK0 134 aa13.34□□□□□ -0.27
GTF2A2-202ENST00000396060 PPP1R3GB7ZBB8 358 aa13.34□□□□□ -0.27
GTF2A2-202ENST00000396060 RHOBTB3O94955 611 aa13.34□□□□□ -0.27
GTF2A2-202ENST00000396060 RPA1P27694 616 aa13.34□□□□□ -0.27
GTF2A2-202ENST00000396060 TPM4P67936 248 aa13.34□□□□□ -0.27
GTF2A2-202ENST00000396060 MYL5Q02045 173 aa13.34□□□□□ -0.27
GTF2A2-202ENST00000396060 TTLL12Q14166 644 aaPredicted RBP13.34□□□□□ -0.27
GTF2A2-202ENST00000396060 ZNF658Q5TYW1 1059 aaPredicted RBP13.34□□□□□ -0.27
GTF2A2-202ENST00000396060 HAUS3Q68CZ6 603 aa13.34□□□□□ -0.27
GTF2A2-202ENST00000396060 POTEEQ6S8J3 1075 aa13.34□□□□□ -0.27
GTF2A2-202ENST00000396060 MOB2Q70IA6 237 aa13.34□□□□□ -0.27
GTF2A2-202ENST00000396060 OTOP1Q7RTM1 612 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms