RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 ANKRD27Q96NW4 1050 aa9.79□□□□□ -0.84
MSH5-205ENST00000395853 NRDE2Q9H7Z3 1164 aa9.79□□□□□ -0.84
MSH5-205ENST00000395853 ANO2Q9NQ90 1003 aa9.79□□□□□ -0.84
MSH5-205ENST00000395853 ARFGEF2Q9Y6D5 1785 aa9.79□□□□□ -0.84
MSH5-205ENST00000395853 A0A087WZG4 1122 aa9.79□□□□□ -0.84
MSH5-205ENST00000395853 NFKBIEO00221 500 aa9.79□□□□□ -0.84
MSH5-205ENST00000395853 CBFA2T2O43439 604 aa9.79□□□□□ -0.84
MSH5-205ENST00000395853 LGR5O75473 907 aa9.79□□□□□ -0.84
MSH5-205ENST00000395853 HNRNPCP07910 306 aaKnown RBP eCLIP9.79□□□□□ -0.84
MSH5-205ENST00000395853 ADAM9Q13443 819 aa9.79□□□□□ -0.84
MSH5-205ENST00000395853 CHADLQ6NUI6 762 aa9.79□□□□□ -0.84
MSH5-205ENST00000395853 HIBCHQ6NVY1 386 aaPredicted RBP9.79□□□□□ -0.84
MSH5-205ENST00000395853 TMEM53Q6P2H8 277 aa9.79□□□□□ -0.84
MSH5-205ENST00000395853 GIGYF2Q6Y7W6 1299 aaKnown RBP9.79□□□□□ -0.84
MSH5-205ENST00000395853 C2CD5Q86YS7 1000 aa9.79□□□□□ -0.84
MSH5-205ENST00000395853 WDR75Q8IWA0 830 aaKnown RBP9.79□□□□□ -0.84
MSH5-205ENST00000395853 DNAJC10Q8IXB1 793 aa9.79□□□□□ -0.84
MSH5-205ENST00000395853 ABHD8Q96I13 439 aa9.79□□□□□ -0.84
MSH5-205ENST00000395853 FGD4Q96M96 766 aa9.79□□□□□ -0.84
MSH5-205ENST00000395853 CCDC85AQ96PX6 553 aaPredicted RBP9.79□□□□□ -0.84
MSH5-205ENST00000395853 SIL1Q9H173 461 aa9.79□□□□□ -0.84
MSH5-205ENST00000395853 VCX3BQ9H321 246 aa9.79□□□□□ -0.84
MSH5-205ENST00000395853 VCX3AQ9NNX9 186 aa9.79□□□□□ -0.84
MSH5-205ENST00000395853 LSP1P33241 339 aa9.78□□□□□ -0.84
MSH5-205ENST00000395853 NLRP5P59047 1200 aa9.78□□□□□ -0.84
MSH5-205ENST00000395853 SESTD1Q86VW0 696 aa9.78□□□□□ -0.84
MSH5-205ENST00000395853 TRIM50Q86XT4 487 aa9.78□□□□□ -0.84
MSH5-205ENST00000395853 CLASRPQ8N2M8 674 aaKnown RBP9.78□□□□□ -0.84
MSH5-205ENST00000395853 KIFAP3Q92845 792 aa9.78□□□□□ -0.84
MSH5-205ENST00000395853 DHTKD1Q96HY7 919 aaPredicted RBP9.78□□□□□ -0.84
MSH5-205ENST00000395853 TRAPPC9Q96Q05 1148 aa9.78□□□□□ -0.84
MSH5-205ENST00000395853 OSBPL7Q9BZF2 842 aa9.78□□□□□ -0.84
MSH5-205ENST00000395853 SEL1LQ9UBV2 794 aa9.78□□□□□ -0.84
MSH5-205ENST00000395853 LAMB4A4D0S4 1761 aa9.78□□□□□ -0.84
MSH5-205ENST00000395853 FER1L6Q2WGJ9 1857 aa9.78□□□□□ -0.84
MSH5-205ENST00000395853 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.78□□□□□ -0.84
MSH5-205ENST00000395853 CTAGE15A4D2H0 777 aa9.78□□□□□ -0.84
MSH5-205ENST00000395853 ARHGAP6O43182 974 aa9.78□□□□□ -0.84
MSH5-205ENST00000395853 KDM1AO60341 852 aa9.78□□□□□ -0.84
MSH5-205ENST00000395853 PEX14O75381 377 aa9.78□□□□□ -0.84
MSH5-205ENST00000395853 PDGFRBP09619 1106 aa9.78□□□□□ -0.84
MSH5-205ENST00000395853 CTAGE8P0CG41 777 aa9.78□□□□□ -0.84
MSH5-205ENST00000395853 CTAGE6Q86UF2 777 aa9.78□□□□□ -0.84
MSH5-205ENST00000395853 CCAR1Q8IX12 1150 aaKnown RBP9.78□□□□□ -0.84
MSH5-205ENST00000395853 CTAGE4Q8IX94 777 aa9.78□□□□□ -0.84
MSH5-205ENST00000395853 SLC7A5P1Q8MH63 180 aa9.78□□□□□ -0.84
MSH5-205ENST00000395853 STK11IPQ8N1F8 1099 aa9.78□□□□□ -0.84
MSH5-205ENST00000395853 NAF1Q96HR8 494 aaKnown RBP9.78□□□□□ -0.84
MSH5-205ENST00000395853 SNX27Q96L92 541 aa9.78□□□□□ -0.84
MSH5-205ENST00000395853 CCT8L2Q96SF2 557 aa9.78□□□□□ -0.84
MSH5-205ENST00000395853 XPO4Q9C0E2 1151 aaKnown RBP9.78□□□□□ -0.84
MSH5-205ENST00000395853 SYNCQ9H7C4 482 aa9.78□□□□□ -0.84
MSH5-205ENST00000395853 HTR3EA5X5Y0 456 aa9.77□□□□□ -0.84
MSH5-205ENST00000395853 BOLA2-SMG1P6H3BVE0 249 aa9.77□□□□□ -0.84
MSH5-205ENST00000395853 FAM107AO95990 144 aa9.77□□□□□ -0.84
MSH5-205ENST00000395853 A1BGP04217 495 aa9.77□□□□□ -0.84
MSH5-205ENST00000395853 TCF7P36402 384 aaPredicted RBP9.77□□□□□ -0.84
MSH5-205ENST00000395853 ITGA7Q13683 1181 aa9.77□□□□□ -0.84
MSH5-205ENST00000395853 AACSQ86V21 672 aa9.77□□□□□ -0.84
MSH5-205ENST00000395853 LMNTD2Q8IXW0 634 aa9.77□□□□□ -0.84
MSH5-205ENST00000395853 MYO1HQ8N1T3 1032 aa9.77□□□□□ -0.84
MSH5-205ENST00000395853 P3H4Q92791 437 aa9.77□□□□□ -0.84
MSH5-205ENST00000395853 MOV10L1Q9BXT6 1211 aaKnown RBP9.77□□□□□ -0.84
MSH5-205ENST00000395853 GOLPH3LQ9H4A5 285 aa9.77□□□□□ -0.84
MSH5-205ENST00000395853 TIMM22Q9Y584 194 aa9.77□□□□□ -0.84
MSH5-205ENST00000395853 UBR2Q8IWV8 1755 aa9.77□□□□□ -0.84
MSH5-205ENST00000395853 VPS37CA5D8V6 355 aaPredicted RBP9.77□□□□□ -0.85
MSH5-205ENST00000395853 USO1O60763 962 aaKnown RBP9.77□□□□□ -0.85
MSH5-205ENST00000395853 MATR3P43243 847 aaKnown RBP eCLIP9.77□□□□□ -0.85
MSH5-205ENST00000395853 USP46P62068 366 aa9.77□□□□□ -0.85
MSH5-205ENST00000395853 HDLBPQ00341 1268 aaKnown RBP9.77□□□□□ -0.85
MSH5-205ENST00000395853 PPP1R7Q15435 360 aa9.77□□□□□ -0.85
MSH5-205ENST00000395853 LACTB2Q53H82 288 aaPredicted RBP9.77□□□□□ -0.85
MSH5-205ENST00000395853 CFAP157Q5JU67 520 aa9.77□□□□□ -0.85
MSH5-205ENST00000395853 ANKRD20A2Q5SQ80 823 aa9.77□□□□□ -0.85
MSH5-205ENST00000395853 ANKRD20A1Q5TYW2 823 aa9.77□□□□□ -0.85
MSH5-205ENST00000395853 ANKRD20A3Q5VUR7 823 aa9.77□□□□□ -0.85
MSH5-205ENST00000395853 TCERG1LQ5VWI1 586 aa9.77□□□□□ -0.85
MSH5-205ENST00000395853 ATL3Q6DD88 541 aa9.77□□□□□ -0.85
MSH5-205ENST00000395853 CLEC4GQ6UXB4 293 aa9.77□□□□□ -0.85
MSH5-205ENST00000395853 ZNF365Q70YC5 407 aa9.77□□□□□ -0.85
MSH5-205ENST00000395853 UBE3BQ7Z3V4 1068 aa9.77□□□□□ -0.85
MSH5-205ENST00000395853 NLRP14Q86W24 1093 aa9.77□□□□□ -0.85
MSH5-205ENST00000395853 NSUN7Q8NE18 718 aaKnown RBP9.77□□□□□ -0.85
MSH5-205ENST00000395853 DEPTORQ8TB45 409 aa9.77□□□□□ -0.85
MSH5-205ENST00000395853 MYCBPAPQ8TBZ2 947 aa9.77□□□□□ -0.85
MSH5-205ENST00000395853 AGAP11Q8TF27 550 aa9.77□□□□□ -0.85
MSH5-205ENST00000395853 EAF2Q96CJ1 260 aaPredicted RBP9.77□□□□□ -0.85
MSH5-205ENST00000395853 BRIP1Q9BX63 1249 aa9.77□□□□□ -0.85
MSH5-205ENST00000395853 SEZ6LQ9BYH1 1024 aa9.77□□□□□ -0.85
MSH5-205ENST00000395853 CCDC8Q9H0W5 538 aaPredicted RBP9.77□□□□□ -0.85
MSH5-205ENST00000395853 CCDC68Q9H2F9 335 aa9.77□□□□□ -0.85
MSH5-205ENST00000395853 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.77□□□□□ -0.85
MSH5-205ENST00000395853 DAAM1Q9Y4D1 1078 aa9.77□□□□□ -0.85
MSH5-205ENST00000395853 CNTNAP1P78357 1384 aa9.77□□□□□ -0.85
MSH5-205ENST00000395853 EIF4E1BA6NMX2 242 aaKnown RBP9.76□□□□□ -0.85
MSH5-205ENST00000395853 NR1I2O75469 434 aa9.76□□□□□ -0.85
MSH5-205ENST00000395853 FGFR1OPO95684 399 aaKnown RBP9.76□□□□□ -0.85
MSH5-205ENST00000395853 COPB2P35606 906 aa9.76□□□□□ -0.85
MSH5-205ENST00000395853 TAF11Q15544 211 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms