RNA–Protein interactions for RNA: ENST00000395840.6

RAE1-202, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-202ENST00000395840 MCM9Q9NXL9 1143 aa10.06□□□□□ -0.8
RAE1-202ENST00000395840 CSADQ9Y600 493 aa10.06□□□□□ -0.8
RAE1-202ENST00000395840 ADGRG1Q9Y653 693 aa10.06□□□□□ -0.8
RAE1-202ENST00000395840 RASSF10A6NK89 507 aa10.06□□□□□ -0.8
RAE1-202ENST00000395840 M0R2C6 588 aa10.06□□□□□ -0.8
RAE1-202ENST00000395840 SLC27A2O14975 620 aa10.06□□□□□ -0.8
RAE1-202ENST00000395840 ZEB2O60315 1214 aa10.06□□□□□ -0.8
RAE1-202ENST00000395840 SLC8A1P32418 973 aa10.06□□□□□ -0.8
RAE1-202ENST00000395840 PRPHP41219 470 aa10.06□□□□□ -0.8
RAE1-202ENST00000395840 IFT88Q13099 833 aa10.06□□□□□ -0.8
RAE1-202ENST00000395840 ADALQ6DHV7 355 aa10.06□□□□□ -0.8
RAE1-202ENST00000395840 SAPCD2Q86UD0 394 aa10.06□□□□□ -0.8
RAE1-202ENST00000395840 OR8K1Q8NGG5 319 aa10.06□□□□□ -0.8
RAE1-202ENST00000395840 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.06□□□□□ -0.8
RAE1-202ENST00000395840 BATF3Q9NR55 127 aa10.06□□□□□ -0.8
RAE1-202ENST00000395840 ZNF112Q9UJU3 913 aa10.06□□□□□ -0.8
RAE1-202ENST00000395840 ANGEL1Q9UNK9 670 aaKnown RBP10.06□□□□□ -0.8
RAE1-202ENST00000395840 TAF6LQ9Y6J9 622 aa10.06□□□□□ -0.8
RAE1-202ENST00000395840 USP2O75604 605 aaPredicted RBP10.05□□□□□ -0.8
RAE1-202ENST00000395840 PYGLP06737 847 aa10.05□□□□□ -0.8
RAE1-202ENST00000395840 MCM3P25205 808 aa10.05□□□□□ -0.8
RAE1-202ENST00000395840 HUNKP57058 714 aa10.05□□□□□ -0.8
RAE1-202ENST00000395840 DEFB115Q30KQ5 88 aa10.05□□□□□ -0.8
RAE1-202ENST00000395840 LDLRAD1Q5T700 205 aa10.05□□□□□ -0.8
RAE1-202ENST00000395840 CCDC181Q5TID7 509 aa10.05□□□□□ -0.8
RAE1-202ENST00000395840 NAA35Q5VZE5 725 aa10.05□□□□□ -0.8
RAE1-202ENST00000395840 SPECC1LQ69YQ0 1117 aa10.05□□□□□ -0.8
RAE1-202ENST00000395840 CAPRIN2Q6IMN6 1127 aaKnown RBP10.05□□□□□ -0.8
RAE1-202ENST00000395840 RAD9BQ6WBX8 426 aa10.05□□□□□ -0.8
RAE1-202ENST00000395840 PIK3R5Q8WYR1 880 aa10.05□□□□□ -0.8
RAE1-202ENST00000395840 SLC39A2Q9NP94 309 aa10.05□□□□□ -0.8
RAE1-202ENST00000395840 HOMER3Q9NSC5 361 aa10.05□□□□□ -0.8
RAE1-202ENST00000395840 SERPINB13Q9UIV8 391 aa10.05□□□□□ -0.8
RAE1-202ENST00000395840 NAV1Q8NEY1 1877 aa10.05□□□□□ -0.8
RAE1-202ENST00000395840 CDK5RAP2Q96SN8 1893 aa10.05□□□□□ -0.8
RAE1-202ENST00000395840 CTNND1O60716 968 aaKnown RBP10.05□□□□□ -0.8
RAE1-202ENST00000395840 C1QTNF12Q5T7M4 302 aa10.05□□□□□ -0.8
RAE1-202ENST00000395840 NFXL1Q6ZNB6 911 aa10.05□□□□□ -0.8
RAE1-202ENST00000395840 KLRG1Q96E93 195 aa10.05□□□□□ -0.8
RAE1-202ENST00000395840 NAPBQ9H115 298 aa10.05□□□□□ -0.8
RAE1-202ENST00000395840 GOLGA6L7A0A1B0GV03 622 aa10.04□□□□□ -0.8
RAE1-202ENST00000395840 DDTLA6NHG4 134 aaPredicted RBP10.04□□□□□ -0.8
RAE1-202ENST00000395840 GSG1L2A8MUP6 293 aa10.04□□□□□ -0.8
RAE1-202ENST00000395840 PCP11498 1178 aaKnown RBP10.04□□□□□ -0.8
RAE1-202ENST00000395840 SKOR1P84550 965 aa10.04□□□□□ -0.8
RAE1-202ENST00000395840 NOL9Q5SY16 702 aaKnown RBP10.04□□□□□ -0.8
RAE1-202ENST00000395840 PRAMEF18Q5VWM3 479 aa10.04□□□□□ -0.8
RAE1-202ENST00000395840 RGMBQ6NW40 437 aa10.04□□□□□ -0.8
RAE1-202ENST00000395840 ZFPM1Q8IX07 1006 aa10.04□□□□□ -0.8
RAE1-202ENST00000395840 IFNL3Q8IZI9 196 aa10.04□□□□□ -0.8
RAE1-202ENST00000395840 SDR42E1Q8WUS8 393 aa10.04□□□□□ -0.8
RAE1-202ENST00000395840 SLC10A4Q96EP9 437 aa10.04□□□□□ -0.8
RAE1-202ENST00000395840 DSCC1Q9BVC3 393 aa10.04□□□□□ -0.8
RAE1-202ENST00000395840 HAUS2Q9NVX0 235 aa10.04□□□□□ -0.8
RAE1-202ENST00000395840 MYH1P12882 1939 aa10.04□□□□□ -0.8
RAE1-202ENST00000395840 A0A0D9SFI3 127 aa10.04□□□□□ -0.8
RAE1-202ENST00000395840 GOLGA8KD6RF30 607 aa10.04□□□□□ -0.8
RAE1-202ENST00000395840 ABL1P00519 1130 aa10.04□□□□□ -0.8
RAE1-202ENST00000395840 ATP1A2P50993 1020 aa10.04□□□□□ -0.8
RAE1-202ENST00000395840 SF3A1Q15459 793 aaKnown RBP10.04□□□□□ -0.8
RAE1-202ENST00000395840 C12orf60Q5U649 245 aa10.04□□□□□ -0.8
RAE1-202ENST00000395840 BZW1Q7L1Q6 419 aaKnown RBP10.04□□□□□ -0.8
RAE1-202ENST00000395840 SH3BP5LQ7L8J4 393 aa10.04□□□□□ -0.8
RAE1-202ENST00000395840 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.04□□□□□ -0.8
RAE1-202ENST00000395840 ZNF473Q8WTR7 871 aaKnown RBP10.04□□□□□ -0.8
RAE1-202ENST00000395840 FAM227BQ96M60 508 aa10.04□□□□□ -0.8
RAE1-202ENST00000395840 PAGR1Q9BTK6 254 aa10.04□□□□□ -0.8
RAE1-202ENST00000395840 YIPF3Q9GZM5 350 aa10.04□□□□□ -0.8
RAE1-202ENST00000395840 ALDH8A1Q9H2A2 487 aaPredicted RBP10.04□□□□□ -0.8
RAE1-202ENST00000395840 PICK1Q9NRD5 415 aa10.04□□□□□ -0.8
RAE1-202ENST00000395840 SAP30BPQ9UHR5 308 aaKnown RBP10.04□□□□□ -0.8
RAE1-202ENST00000395840 SSC5DA1L4H1 1573 aa10.04□□□□□ -0.8
RAE1-202ENST00000395840 A0A1W2PQ27 194 aa10.03□□□□□ -0.8
RAE1-202ENST00000395840 A0A1W2PQ64 194 aa10.03□□□□□ -0.8
RAE1-202ENST00000395840 A0A1W2PQD8 194 aa10.03□□□□□ -0.8
RAE1-202ENST00000395840 GUCY1B3Q02153 619 aa10.03□□□□□ -0.8
RAE1-202ENST00000395840 MIS18BP1Q6P0N0 1132 aa10.03□□□□□ -0.8
RAE1-202ENST00000395840 RASSF8Q8NHQ8 419 aa10.03□□□□□ -0.8
RAE1-202ENST00000395840 MAP4K1Q92918 833 aa10.03□□□□□ -0.8
RAE1-202ENST00000395840 TBC1D31Q96DN5 1066 aa10.03□□□□□ -0.8
RAE1-202ENST00000395840 CCDC17Q96LX7 622 aa10.03□□□□□ -0.8
RAE1-202ENST00000395840 WRNIP1Q96S55 665 aa10.03□□□□□ -0.8
RAE1-202ENST00000395840 POLD4Q9HCU8 107 aa10.03□□□□□ -0.8
RAE1-202ENST00000395840 DDX60LQ5H9U9 1706 aaKnown RBP10.03□□□□□ -0.8
RAE1-202ENST00000395840 A6NNZ2 444 aa10.03□□□□□ -0.8
RAE1-202ENST00000395840 USP17L12C9JPN9 530 aa10.03□□□□□ -0.8
RAE1-202ENST00000395840 USP17L21D6R901 530 aa10.03□□□□□ -0.8
RAE1-202ENST00000395840 OPLAHO14841 1288 aa10.03□□□□□ -0.8
RAE1-202ENST00000395840 ZBTB48P10074 688 aaPredicted RBP10.03□□□□□ -0.8
RAE1-202ENST00000395840 CDC25CP30307 473 aa10.03□□□□□ -0.8
RAE1-202ENST00000395840 ZNF157P51786 506 aaPredicted RBP10.03□□□□□ -0.8
RAE1-202ENST00000395840 PDE4BQ07343 736 aa10.03□□□□□ -0.8
RAE1-202ENST00000395840 TUBB8Q3ZCM7 444 aa10.03□□□□□ -0.8
RAE1-202ENST00000395840 FILIP1LQ4L180 1135 aa10.03□□□□□ -0.8
RAE1-202ENST00000395840 ATL3Q6DD88 541 aa10.03□□□□□ -0.8
RAE1-202ENST00000395840 NSMCE1Q8WV22 266 aa10.03□□□□□ -0.8
RAE1-202ENST00000395840 SEC62Q99442 399 aaKnown RBP10.03□□□□□ -0.8
RAE1-202ENST00000395840 EPN3Q9H201 632 aa10.03□□□□□ -0.8
RAE1-202ENST00000395840 RTEL1Q9NZ71 1219 aa10.03□□□□□ -0.8
RAE1-202ENST00000395840 G3BP2Q9UN86 482 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms