RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 MTSS1O43312 755 aa4.74□□□□□ -1.65
HERC4-204ENST00000395198 SKIP12755 728 aa4.74□□□□□ -1.65
HERC4-204ENST00000395198 DNAJB1P25685 340 aa4.74□□□□□ -1.65
HERC4-204ENST00000395198 PRKAR2BP31323 418 aa4.74□□□□□ -1.65
HERC4-204ENST00000395198 TUBP50607 506 aa4.74□□□□□ -1.65
HERC4-204ENST00000395198 NR5A1Q13285 461 aa4.74□□□□□ -1.65
HERC4-204ENST00000395198 CNSTQ6PJW8 725 aa4.74□□□□□ -1.65
HERC4-204ENST00000395198 LPCAT2Q7L5N7 544 aa4.74□□□□□ -1.65
HERC4-204ENST00000395198 PPP1R42Q7Z4L9 355 aa4.74□□□□□ -1.65
HERC4-204ENST00000395198 CCDC91Q7Z6B0 441 aa4.74□□□□□ -1.65
HERC4-204ENST00000395198 COG1Q8WTW3 980 aa4.74□□□□□ -1.65
HERC4-204ENST00000395198 CARD11Q9BXL7 1154 aa4.74□□□□□ -1.65
HERC4-204ENST00000395198 PRELID1Q9Y255 219 aa4.74□□□□□ -1.65
HERC4-204ENST00000395198 H3BRJ5 948 aa4.74□□□□□ -1.65
HERC4-204ENST00000395198 STX6O43752 255 aa4.74□□□□□ -1.65
HERC4-204ENST00000395198 SOX11P35716 441 aa4.74□□□□□ -1.65
HERC4-204ENST00000395198 GRIK1P39086 918 aa4.74□□□□□ -1.65
HERC4-204ENST00000395198 STAT1P42224 750 aa4.74□□□□□ -1.65
HERC4-204ENST00000395198 BEX3Q00994 111 aa4.74□□□□□ -1.65
HERC4-204ENST00000395198 SEPT6Q14141 434 aa4.74□□□□□ -1.65
HERC4-204ENST00000395198 TCEA2Q15560 299 aa4.74□□□□□ -1.65
HERC4-204ENST00000395198 BBS9Q3SYG4 887 aa4.74□□□□□ -1.65
HERC4-204ENST00000395198 C1orf53Q5VUE5 145 aa4.74□□□□□ -1.65
HERC4-204ENST00000395198 MCTP1Q6DN14 999 aa4.74□□□□□ -1.65
HERC4-204ENST00000395198 BRICD5Q6PL45 260 aa4.74□□□□□ -1.65
HERC4-204ENST00000395198 NIM1KQ8IY84 436 aa4.74□□□□□ -1.65
HERC4-204ENST00000395198 RNF168Q8IYW5 571 aaPredicted RBP4.74□□□□□ -1.65
HERC4-204ENST00000395198 LRRC45Q96CN5 670 aa4.74□□□□□ -1.65
HERC4-204ENST00000395198 TMEM237Q96Q45 408 aa4.74□□□□□ -1.65
HERC4-204ENST00000395198 CCDC113Q9H0I3 377 aa4.74□□□□□ -1.65
HERC4-204ENST00000395198 IFT80Q9P2H3 777 aaPredicted RBP4.74□□□□□ -1.65
HERC4-204ENST00000395198 SH3BGRL2Q9UJC5 107 aa4.74□□□□□ -1.65
HERC4-204ENST00000395198 H0YC42 278 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 OLFM2O95897 454 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 PHKG2P15735 406 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 CCDC173Q0VFZ6 552 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 NAA30Q147X3 362 aaPredicted RBP4.73□□□□□ -1.65
HERC4-204ENST00000395198 USPL1Q5W0Q7 1092 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 FAM173BQ6P4H8 233 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 ATF7IPQ6VMQ6 1270 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 GPR155Q7Z3F1 870 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 HEATR4Q86WZ0 1026 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 ALKBH8Q96BT7 664 aaKnown RBP4.73□□□□□ -1.65
HERC4-204ENST00000395198 HERC2P3Q9BVR0 1158 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 PLSCR4Q9NRQ2 329 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 SLC5A4Q9NY91 659 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 TRHDEQ9UKU6 1024 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 GPR34Q9UPC5 381 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 RRN3P2A6NIE6 340 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 F6X3S4 739 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 TADA3O75528 432 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 MCM4P33991 863 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 EVCP57679 992 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 GJA9P57773 515 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 FKBP5Q13451 457 aaPredicted RBP4.73□□□□□ -1.65
HERC4-204ENST00000395198 PPP1R7Q15435 360 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 KRT71Q3SY84 523 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 CCDC183Q5T5S1 534 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 VSIG1Q86XK7 387 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 DZIP1Q86YF9 867 aaKnown RBP4.73□□□□□ -1.65
HERC4-204ENST00000395198 GRAMD2AQ8IUY3 354 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 OTUD7AQ8TE49 926 aaPredicted RBP4.73□□□□□ -1.65
HERC4-204ENST00000395198 SHC3Q92529 594 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 NINJ1Q92982 152 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 GCC1Q96CN9 775 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 MFSD3Q96ES6 412 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 AAASQ9NRG9 546 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 STRIP2Q9ULQ0 834 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 EFR3BQ9Y2G0 817 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 AQRO60306 1485 aaKnown RBP eCLIP4.73□□□□□ -1.651e-10■□□□□ 10.5
HERC4-204ENST00000395198 TNIKQ9UKE5 1360 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 GOLGA6L10A0A0M3HER8 536 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 TRIM75PA6NK02 468 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 ZBED4O75132 1171 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 TBX18O95935 607 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 ADRB2P07550 413 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 FERP16591 822 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 GNA15P30679 374 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 HDGFP51858 240 aaKnown RBP4.73□□□□□ -1.65
HERC4-204ENST00000395198 OASLQ15646 514 aaKnown RBP4.73□□□□□ -1.65
HERC4-204ENST00000395198 KBTBD12Q3ZCT8 623 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 ERMP1Q7Z2K6 904 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 PPFIBP1Q86W92 1011 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 AFAP1Q8N556 730 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 CCHCR1Q8TD31 782 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 CCPG1Q9ULG6 757 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 AGTPBP1Q9UPW5 1226 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 PLAAQ9Y263 795 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 PAPLNO95428 1278 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 MAP2K2P36507 400 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 NMIQ13287 307 aaPredicted RBP4.73□□□□□ -1.65
HERC4-204ENST00000395198 SCARB2Q14108 478 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 KIAA0753Q2KHM9 967 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 CCDC152Q4G0S7 254 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 ITPRIPL1Q6GPH6 555 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 GBP6Q6ZN66 633 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 RBM33Q96EV2 1170 aaKnown RBP4.73□□□□□ -1.65
HERC4-204ENST00000395198 COG3Q96JB2 828 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 FNBP1Q96RU3 617 aa4.73□□□□□ -1.65
HERC4-204ENST00000395198 TARS2Q9BW92 718 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms