RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 GH1P01241 217 aa18.6■□□□□ 0.57
SNCA-205ENST00000394991 SNHG28P0DPA3 235 aa18.6■□□□□ 0.57
SNCA-205ENST00000394991 ALX1Q15699 326 aa18.6■□□□□ 0.57
SNCA-205ENST00000394991 LEXMQ3ZCV2 418 aa18.6■□□□□ 0.57
SNCA-205ENST00000394991 USH1GQ495M9 461 aa18.6■□□□□ 0.57
SNCA-205ENST00000394991 FAM178BQ8IXR5 827 aa18.6■□□□□ 0.57
SNCA-205ENST00000394991 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.6■□□□□ 0.57
SNCA-205ENST00000394991 TBC1D5Q92609 795 aa18.6■□□□□ 0.57
SNCA-205ENST00000394991 WNT8BQ93098 351 aa18.6■□□□□ 0.57
SNCA-205ENST00000394991 RAD9AQ99638 391 aa18.6■□□□□ 0.57
SNCA-205ENST00000394991 CPVLQ9H3G5 476 aa18.6■□□□□ 0.57
SNCA-205ENST00000394991 HDAC6Q9UBN7 1215 aa18.6■□□□□ 0.57
SNCA-205ENST00000394991 GTF2IRD1Q9UHL9 959 aa18.6■□□□□ 0.57
SNCA-205ENST00000394991 PNMA2Q9UL42 364 aa18.6■□□□□ 0.57
SNCA-205ENST00000394991 SALL3Q9BXA9 1300 aa18.59■□□□□ 0.57
SNCA-205ENST00000394991 LAMA4Q16363 1823 aa18.59■□□□□ 0.57
SNCA-205ENST00000394991 ABHD14A-ACY1A0A1B0GW23 586 aa18.59■□□□□ 0.57
SNCA-205ENST00000394991 IL9P15248 144 aa18.59■□□□□ 0.57
SNCA-205ENST00000394991 MBTPS1Q14703 1052 aa18.59■□□□□ 0.57
SNCA-205ENST00000394991 TRIM71Q2Q1W2 868 aaKnown RBP18.59■□□□□ 0.57
SNCA-205ENST00000394991 FAM117BQ6P1L5 589 aa18.59■□□□□ 0.57
SNCA-205ENST00000394991 SEPT14Q6ZU15 432 aa18.59■□□□□ 0.57
SNCA-205ENST00000394991 CHST3Q7LGC8 479 aa18.59■□□□□ 0.57
SNCA-205ENST00000394991 TAAR1Q96RJ0 339 aa18.59■□□□□ 0.57
SNCA-205ENST00000394991 COL20A1Q9P218 1284 aa18.59■□□□□ 0.57
SNCA-205ENST00000394991 PARNO95453 639 aaKnown RBP18.58■□□□□ 0.56
SNCA-205ENST00000394991 MX1P20591 662 aa18.58■□□□□ 0.56
SNCA-205ENST00000394991 KCNA5P22460 613 aa18.58■□□□□ 0.56
SNCA-205ENST00000394991 GJD3Q8N144 294 aa18.58■□□□□ 0.56
SNCA-205ENST00000394991 RGS22Q8NE09 1264 aa18.58■□□□□ 0.56
SNCA-205ENST00000394991 SYTL5Q8TDW5 730 aaPredicted RBP18.58■□□□□ 0.56
SNCA-205ENST00000394991 RALGAPA2Q2PPJ7 1873 aa18.57■□□□□ 0.56
SNCA-205ENST00000394991 B4DLN1 442 aa18.57■□□□□ 0.56
SNCA-205ENST00000394991 FGAP02671 866 aa18.57■□□□□ 0.56
SNCA-205ENST00000394991 GOLGA8HP0CJ92 632 aa18.57■□□□□ 0.56
SNCA-205ENST00000394991 CASTP20810 708 aaKnown RBP18.57■□□□□ 0.56
SNCA-205ENST00000394991 PSEN2P49810 448 aa18.57■□□□□ 0.56
SNCA-205ENST00000394991 MRPL12P52815 198 aaKnown RBP18.57■□□□□ 0.56
SNCA-205ENST00000394991 MKRN4PQ13434 485 aaPredicted RBP18.57■□□□□ 0.56
SNCA-205ENST00000394991 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.57■□□□□ 0.56
SNCA-205ENST00000394991 C17orf80Q9BSJ5 609 aa18.57■□□□□ 0.56
SNCA-205ENST00000394991 ALG1Q9BT22 464 aa18.57■□□□□ 0.56
SNCA-205ENST00000394991 ZNF318Q5VUA4 2279 aa18.57■□□□□ 0.56
SNCA-205ENST00000394991 A0A0D9SFI3 127 aa18.56■□□□□ 0.56
SNCA-205ENST00000394991 PRR33A8MZF0 331 aa18.56■□□□□ 0.56
SNCA-205ENST00000394991 ZNF286BP0CG31 522 aa18.56■□□□□ 0.56
SNCA-205ENST00000394991 HAND2P61296 217 aa18.56■□□□□ 0.56
SNCA-205ENST00000394991 ZNF200P98182 395 aaPredicted RBP18.56■□□□□ 0.56
SNCA-205ENST00000394991 PTK7Q13308 1070 aa18.56■□□□□ 0.56
SNCA-205ENST00000394991 HIC1Q14526 733 aa18.56■□□□□ 0.56
SNCA-205ENST00000394991 ZNF618Q5T7W0 954 aa18.56■□□□□ 0.56
SNCA-205ENST00000394991 ALYREFQ86V81 257 aaKnown RBP18.56■□□□□ 0.56
SNCA-205ENST00000394991 C7orf31Q8N865 590 aa18.56■□□□□ 0.56
SNCA-205ENST00000394991 FAM227BQ96M60 508 aa18.56■□□□□ 0.56
SNCA-205ENST00000394991 UBA5Q9GZZ9 404 aa18.56■□□□□ 0.56
SNCA-205ENST00000394991 PCDHB15Q9Y5E8 787 aa18.56■□□□□ 0.56
SNCA-205ENST00000394991 HAS3O00219 553 aa18.55■□□□□ 0.56
SNCA-205ENST00000394991 EFCAB14O75071 495 aa18.55■□□□□ 0.56
SNCA-205ENST00000394991 F2P00734 622 aa18.55■□□□□ 0.56
SNCA-205ENST00000394991 IKBKEQ14164 716 aa18.55■□□□□ 0.56
SNCA-205ENST00000394991 MFSD10Q14728 455 aa18.55■□□□□ 0.56
SNCA-205ENST00000394991 CDC37Q16543 378 aaPredicted RBP18.55■□□□□ 0.56
SNCA-205ENST00000394991 DGKDQ16760 1214 aa18.55■□□□□ 0.56
SNCA-205ENST00000394991 PTCRAQ6ISU1 281 aaPredicted RBP18.55■□□□□ 0.56
SNCA-205ENST00000394991 TBC1D10CQ8IV04 446 aa18.55■□□□□ 0.56
SNCA-205ENST00000394991 FBXO22Q8NEZ5 403 aa18.55■□□□□ 0.56
SNCA-205ENST00000394991 TTC14Q96N46 770 aa18.55■□□□□ 0.56
SNCA-205ENST00000394991 HELLSQ9NRZ9 838 aa18.55■□□□□ 0.56
SNCA-205ENST00000394991 DDX41Q9UJV9 622 aaKnown RBP18.55■□□□□ 0.56
SNCA-205ENST00000394991 ABCB11O95342 1321 aa18.54■□□□□ 0.56
SNCA-205ENST00000394991 ZMYM6O95789 1325 aa18.54■□□□□ 0.56
SNCA-205ENST00000394991 GRXCR2A6NFK2 248 aa18.54■□□□□ 0.56
SNCA-205ENST00000394991 LGR5O75473 907 aa18.54■□□□□ 0.56
SNCA-205ENST00000394991 SSTR3P32745 418 aaPredicted RBP18.54■□□□□ 0.56
SNCA-205ENST00000394991 STXBP2Q15833 593 aa18.54■□□□□ 0.56
SNCA-205ENST00000394991 KIAA0753Q2KHM9 967 aa18.54■□□□□ 0.56
SNCA-205ENST00000394991 ZNF589Q86UQ0 364 aaPredicted RBP18.54■□□□□ 0.56
SNCA-205ENST00000394991 SP7Q8TDD2 431 aaPredicted RBP18.54■□□□□ 0.56
SNCA-205ENST00000394991 NSUN6Q8TEA1 469 aaKnown RBP18.54■□□□□ 0.56
SNCA-205ENST00000394991 EMID1Q96A84 441 aaPredicted RBP18.54■□□□□ 0.56
SNCA-205ENST00000394991 CRBNQ96SW2 442 aa18.54■□□□□ 0.56
SNCA-205ENST00000394991 RMDN3Q96TC7 470 aa18.54■□□□□ 0.56
SNCA-205ENST00000394991 DOCK5Q9H7D0 1870 aa18.54■□□□□ 0.56
SNCA-205ENST00000394991 HSPD1P10809 573 aaKnown RBP18.53■□□□□ 0.56
SNCA-205ENST00000394991 EIF2AK2P19525 551 aaKnown RBP18.53■□□□□ 0.56
SNCA-205ENST00000394991 HTRA4P83105 476 aaPredicted RBP18.53■□□□□ 0.56
SNCA-205ENST00000394991 GPATCH4Q5T3I0 446 aaKnown RBP18.53■□□□□ 0.56
SNCA-205ENST00000394991 NEK9Q8TD19 979 aa18.53■□□□□ 0.56
SNCA-205ENST00000394991 EVI5LQ96CN4 794 aa18.53■□□□□ 0.56
SNCA-205ENST00000394991 MRPL38Q96DV4 380 aaKnown RBP18.53■□□□□ 0.56
SNCA-205ENST00000394991 IWS1Q96ST2 819 aa18.53■□□□□ 0.56
SNCA-205ENST00000394991 ZKSCAN3Q9BRR0 538 aa18.53■□□□□ 0.56
SNCA-205ENST00000394991 KATNAL1Q9BW62 490 aa18.53■□□□□ 0.56
SNCA-205ENST00000394991 INSL6Q9Y581 213 aa18.53■□□□□ 0.56
SNCA-205ENST00000394991 COL4A6Q14031 1691 aa18.53■□□□□ 0.56
SNCA-205ENST00000394991 NEDD4P46934 1319 aa18.52■□□□□ 0.56
SNCA-205ENST00000394991 H3BQ06 376 aaPredicted RBP18.52■□□□□ 0.56
SNCA-205ENST00000394991 HOXD8P13378 290 aaPredicted RBP18.52■□□□□ 0.56
SNCA-205ENST00000394991 MYOCDQ8IZQ8 938 aa18.52■□□□□ 0.56
SNCA-205ENST00000394991 DBF4BQ8NFT6 615 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms