RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 HARSP12081 509 aaKnown RBP17.67■□□□□ 0.42
SMARCD1-202ENST00000394963 TNIP1Q15025 636 aa17.67■□□□□ 0.42
SMARCD1-202ENST00000394963 KCNK18Q7Z418 384 aa17.67■□□□□ 0.42
SMARCD1-202ENST00000394963 UBR2Q8IWV8 1755 aa17.67■□□□□ 0.42
SMARCD1-202ENST00000394963 ASTN2O75129 1339 aaPredicted RBP17.67■□□□□ 0.42
SMARCD1-202ENST00000394963 PPP1R11O60927 126 aaPredicted RBP17.67■□□□□ 0.42
SMARCD1-202ENST00000394963 FGRP09769 529 aa17.67■□□□□ 0.42
SMARCD1-202ENST00000394963 MYOCDQ8IZQ8 938 aa17.67■□□□□ 0.42
SMARCD1-202ENST00000394963 FAM163AQ96GL9 167 aaPredicted RBP17.67■□□□□ 0.42
SMARCD1-202ENST00000394963 GDAP1L1Q96MZ0 367 aa17.67■□□□□ 0.42
SMARCD1-202ENST00000394963 WRNIP1Q96S55 665 aa17.67■□□□□ 0.42
SMARCD1-202ENST00000394963 ZHX2Q9Y6X8 837 aa17.67■□□□□ 0.42
SMARCD1-202ENST00000394963 TMCO5BA8MYB1 307 aa17.66■□□□□ 0.42
SMARCD1-202ENST00000394963 NOP2P46087 812 aaKnown RBP17.66■□□□□ 0.42
SMARCD1-202ENST00000394963 MRPS25P82663 173 aaKnown RBP17.66■□□□□ 0.42
SMARCD1-202ENST00000394963 UTP14CQ5TAP6 766 aaKnown RBP17.66■□□□□ 0.42
SMARCD1-202ENST00000394963 STYK1Q6J9G0 422 aa17.66■□□□□ 0.42
SMARCD1-202ENST00000394963 BANK1Q8NDB2 785 aa17.66■□□□□ 0.42
SMARCD1-202ENST00000394963 CHP1Q99653 195 aa17.66■□□□□ 0.42
SMARCD1-202ENST00000394963 CCDC169A6NNP5 214 aa17.66■□□□□ 0.42
SMARCD1-202ENST00000394963 EGFRP00533 1210 aa17.66■□□□□ 0.42
SMARCD1-202ENST00000394963 CDC25BP30305 580 aa17.66■□□□□ 0.42
SMARCD1-202ENST00000394963 INPP5BP32019 993 aa17.66■□□□□ 0.42
SMARCD1-202ENST00000394963 MDM2Q00987 491 aaPredicted RBP17.66■□□□□ 0.42
SMARCD1-202ENST00000394963 FAM114A1Q8IWE2 563 aa17.66■□□□□ 0.42
SMARCD1-202ENST00000394963 CNOT7Q9UIV1 285 aaKnown RBP17.66■□□□□ 0.42
SMARCD1-202ENST00000394963 SPDYE2BA6NHP3 402 aa17.66■□□□□ 0.42
SMARCD1-202ENST00000394963 ZBTB39O15060 712 aa17.66■□□□□ 0.42
SMARCD1-202ENST00000394963 SPDYE6P0CI01 402 aa17.66■□□□□ 0.42
SMARCD1-202ENST00000394963 JAG1P78504 1218 aa17.66■□□□□ 0.42
SMARCD1-202ENST00000394963 HAUS3Q68CZ6 603 aa17.66■□□□□ 0.42
SMARCD1-202ENST00000394963 A0A0U1RQJ8 604 aa17.65■□□□□ 0.42
SMARCD1-202ENST00000394963 POLR3GO15318 223 aaPredicted RBP17.65■□□□□ 0.42
SMARCD1-202ENST00000394963 TMED8Q6PL24 325 aaPredicted RBP17.65■□□□□ 0.42
SMARCD1-202ENST00000394963 ATRIPQ8WXE1 791 aa17.65■□□□□ 0.42
SMARCD1-202ENST00000394963 ZNF577Q9BSK1 485 aa17.65■□□□□ 0.42
SMARCD1-202ENST00000394963 SERPINA10Q9UK55 444 aa17.65■□□□□ 0.42
SMARCD1-202ENST00000394963 PDS5AQ29RF7 1337 aaKnown RBP17.65■□□□□ 0.42
SMARCD1-202ENST00000394963 ETF1P62495 437 aaKnown RBP17.65■□□□□ 0.42
SMARCD1-202ENST00000394963 MTMR2Q13614 643 aa17.65■□□□□ 0.42
SMARCD1-202ENST00000394963 PDXDC2PQ6P474 469 aa17.65■□□□□ 0.42
SMARCD1-202ENST00000394963 NEK11Q8NG66 645 aa17.65■□□□□ 0.42
SMARCD1-202ENST00000394963 RIC8AQ9NPQ8 531 aa17.65■□□□□ 0.42
SMARCD1-202ENST00000394963 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.65■□□□□ 0.42
SMARCD1-202ENST00000394963 SHANK3Q9BYB0 1731 aa17.64■□□□□ 0.41
SMARCD1-202ENST00000394963 CRYBG1Q9Y4K1 1723 aa17.64■□□□□ 0.41
SMARCD1-202ENST00000394963 MYCNP04198 464 aaPredicted RBP17.64■□□□□ 0.41
SMARCD1-202ENST00000394963 GMPSP49915 693 aaPredicted RBP17.64■□□□□ 0.41
SMARCD1-202ENST00000394963 ADAM9Q13443 819 aa17.64■□□□□ 0.41
SMARCD1-202ENST00000394963 TNFRSF25Q93038 417 aa17.64■□□□□ 0.41
SMARCD1-202ENST00000394963 PURBQ96QR8 312 aaKnown RBP17.64■□□□□ 0.41
SMARCD1-202ENST00000394963 RIOX1Q9H6W3 641 aa17.64■□□□□ 0.41
SMARCD1-202ENST00000394963 RWDD2AQ9UIY3 292 aa17.64■□□□□ 0.41
SMARCD1-202ENST00000394963 SUGT1Q9Y2Z0 365 aa17.64■□□□□ 0.41
SMARCD1-202ENST00000394963 TNNT3P45378 269 aaPredicted RBP17.64■□□□□ 0.41
SMARCD1-202ENST00000394963 ARHGEF35A5YM69 484 aa17.63■□□□□ 0.41
SMARCD1-202ENST00000394963 WNT10BO00744 389 aa17.63■□□□□ 0.41
SMARCD1-202ENST00000394963 HMGCS2P54868 508 aa17.63■□□□□ 0.41
SMARCD1-202ENST00000394963 PCIF1Q9H4Z3 704 aa17.63■□□□□ 0.41
SMARCD1-202ENST00000394963 AGPAT5Q9NUQ2 364 aa17.63■□□□□ 0.41
SMARCD1-202ENST00000394963 TRIM10Q9UDY6 481 aa17.63■□□□□ 0.41
SMARCD1-202ENST00000394963 TTC26A0AVF1 554 aa17.63■□□□□ 0.41
SMARCD1-202ENST00000394963 USO1O60763 962 aaKnown RBP17.63■□□□□ 0.41
SMARCD1-202ENST00000394963 FGFR1OPO95684 399 aaKnown RBP17.63■□□□□ 0.41
SMARCD1-202ENST00000394963 PSMC6P62333 389 aa17.63■□□□□ 0.41
SMARCD1-202ENST00000394963 MYOZ2Q9NPC6 264 aa17.63■□□□□ 0.41
SMARCD1-202ENST00000394963 RGS17Q9UGC6 210 aaPredicted RBP17.63■□□□□ 0.41
SMARCD1-202ENST00000394963 TFRCP02786 760 aaKnown RBP17.63■□□□□ 0.41
SMARCD1-202ENST00000394963 CCDC181Q5TID7 509 aa17.63■□□□□ 0.41
SMARCD1-202ENST00000394963 AK8Q96MA6 479 aa17.63■□□□□ 0.41
SMARCD1-202ENST00000394963 SH2D4AQ9H788 454 aa17.63■□□□□ 0.41
SMARCD1-202ENST00000394963 INTS13Q9NVM9 706 aa17.63■□□□□ 0.41
SMARCD1-202ENST00000394963 KIF2AO00139 706 aaPredicted RBP17.62■□□□□ 0.41
SMARCD1-202ENST00000394963 PEX10O60683 326 aa17.62■□□□□ 0.41
SMARCD1-202ENST00000394963 POLR2FP61218 127 aaKnown RBP17.62■□□□□ 0.41
SMARCD1-202ENST00000394963 ZFYVE27Q5T4F4 411 aa17.62■□□□□ 0.41
SMARCD1-202ENST00000394963 NBPF12Q5TAG4 269 aaPredicted RBP17.62■□□□□ 0.41
SMARCD1-202ENST00000394963 ANGEL2Q5VTE6 544 aaKnown RBP17.62■□□□□ 0.41
SMARCD1-202ENST00000394963 LDHDQ86WU2 507 aa17.62■□□□□ 0.41
SMARCD1-202ENST00000394963 OR8K1Q8NGG5 319 aa17.62■□□□□ 0.41
SMARCD1-202ENST00000394963 BPIFA3Q9BQP9 254 aa17.62■□□□□ 0.41
SMARCD1-202ENST00000394963 ARGLU1Q9NWB6 273 aaPredicted RBP17.62■□□□□ 0.41
SMARCD1-202ENST00000394963 RABGAP1Q9Y3P9 1069 aa17.62■□□□□ 0.41
SMARCD1-202ENST00000394963 LAD1O00515 517 aa17.62■□□□□ 0.41
SMARCD1-202ENST00000394963 ASNSP08243 561 aa17.62■□□□□ 0.41
SMARCD1-202ENST00000394963 NAALADL2Q58DX5 795 aa17.62■□□□□ 0.41
SMARCD1-202ENST00000394963 KRT26Q7Z3Y9 468 aa17.62■□□□□ 0.41
SMARCD1-202ENST00000394963 BICD1Q96G01 975 aa17.62■□□□□ 0.41
SMARCD1-202ENST00000394963 WDR24Q96S15 920 aa17.62■□□□□ 0.41
SMARCD1-202ENST00000394963 NR2F2P24468 414 aa17.62■□□□□ 0.41
SMARCD1-202ENST00000394963 GRB10Q13322 594 aa17.62■□□□□ 0.41
SMARCD1-202ENST00000394963 RRP1BQ14684 758 aaKnown RBP17.62■□□□□ 0.41
SMARCD1-202ENST00000394963 TC2NQ8N9U0 490 aa17.62■□□□□ 0.41
SMARCD1-202ENST00000394963 RSPH10B2B2RC85 870 aa17.61■□□□□ 0.41
SMARCD1-202ENST00000394963 BUB1O43683 1085 aa17.61■□□□□ 0.41
SMARCD1-202ENST00000394963 RSPH10BP0C881 870 aa17.61■□□□□ 0.41
SMARCD1-202ENST00000394963 CCNE1P24864 410 aa17.61■□□□□ 0.41
SMARCD1-202ENST00000394963 APBA1Q02410 837 aa17.61■□□□□ 0.41
SMARCD1-202ENST00000394963 GABPAQ06546 454 aa17.61■□□□□ 0.41
SMARCD1-202ENST00000394963 MED15Q96RN5 788 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms