RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 CES2O00748 559 aa11.11□□□□□ -0.63
UBE2D3-208ENST00000394803 ZNF185O15231 689 aa11.11□□□□□ -0.63
UBE2D3-208ENST00000394803 CYTH3O43739 400 aa11.11□□□□□ -0.63
UBE2D3-208ENST00000394803 MOCS3O95396 460 aa11.11□□□□□ -0.63
UBE2D3-208ENST00000394803 FCER1AP12319 257 aa11.11□□□□□ -0.63
UBE2D3-208ENST00000394803 COL24A1Q17RW2 1714 aa11.11□□□□□ -0.63
UBE2D3-208ENST00000394803 AHDC1Q5TGY3 1603 aaPredicted RBP11.11□□□□□ -0.63
UBE2D3-208ENST00000394803 TPTE2Q6XPS3 522 aa11.11□□□□□ -0.63
UBE2D3-208ENST00000394803 RRAGAQ7L523 313 aa11.11□□□□□ -0.63
UBE2D3-208ENST00000394803 NEDD1Q8NHV4 660 aa11.11□□□□□ -0.63
UBE2D3-208ENST00000394803 TBCKQ8TEA7 893 aa11.11□□□□□ -0.63
UBE2D3-208ENST00000394803 WHAMMQ8TF30 809 aa11.11□□□□□ -0.63
UBE2D3-208ENST00000394803 SETDB2Q96T68 719 aa11.11□□□□□ -0.63
UBE2D3-208ENST00000394803 NT5C3AQ9H0P0 336 aa11.11□□□□□ -0.63
UBE2D3-208ENST00000394803 SEMA6BQ9H3T3 888 aa11.11□□□□□ -0.63
UBE2D3-208ENST00000394803 SLC39A2Q9NP94 309 aa11.11□□□□□ -0.63
UBE2D3-208ENST00000394803 FAM207AQ9NSI2 230 aaPredicted RBP11.11□□□□□ -0.63
UBE2D3-208ENST00000394803 CAPN6Q9Y6Q1 641 aa11.11□□□□□ -0.63
UBE2D3-208ENST00000394803 BAZ2BQ9UIF8 2168 aaKnown RBP11.1□□□□□ -0.63
UBE2D3-208ENST00000394803 SPATA31A1Q5TZJ5 1347 aa11.1□□□□□ -0.63
UBE2D3-208ENST00000394803 LRRC53A6NM62 1247 aa11.1□□□□□ -0.63
UBE2D3-208ENST00000394803 SRRM3A6NNA2 597 aaPredicted RBP11.1□□□□□ -0.63
UBE2D3-208ENST00000394803 AGPSO00116 658 aa11.1□□□□□ -0.63
UBE2D3-208ENST00000394803 TRIM66O15016 1216 aa11.1□□□□□ -0.63
UBE2D3-208ENST00000394803 EIF3HO15372 352 aaKnown RBP eCLIP11.1□□□□□ -0.63
UBE2D3-208ENST00000394803 KLK7P49862 253 aa11.1□□□□□ -0.63
UBE2D3-208ENST00000394803 IRAK1P51617 712 aa11.1□□□□□ -0.63
UBE2D3-208ENST00000394803 NAP1L1P55209 391 aaKnown RBP11.1□□□□□ -0.63
UBE2D3-208ENST00000394803 TNNC1P63316 161 aa11.1□□□□□ -0.63
UBE2D3-208ENST00000394803 FKBP3Q00688 224 aaKnown RBP11.1□□□□□ -0.63
UBE2D3-208ENST00000394803 TDRD12Q587J7 1177 aaKnown RBP11.1□□□□□ -0.63
UBE2D3-208ENST00000394803 SFMBT2Q5VUG0 894 aa11.1□□□□□ -0.63
UBE2D3-208ENST00000394803 C16orf86Q6ZW13 317 aa11.1□□□□□ -0.63
UBE2D3-208ENST00000394803 TADA2BQ86TJ2 420 aa11.1□□□□□ -0.63
UBE2D3-208ENST00000394803 MYOCDQ8IZQ8 938 aa11.1□□□□□ -0.63
UBE2D3-208ENST00000394803 MREGQ8N565 214 aa11.1□□□□□ -0.63
UBE2D3-208ENST00000394803 RAD54LQ92698 747 aa11.1□□□□□ -0.63
UBE2D3-208ENST00000394803 LRRC1Q9BTT6 524 aa11.1□□□□□ -0.63
UBE2D3-208ENST00000394803 TANGO6Q9C0B7 1094 aa11.1□□□□□ -0.63
UBE2D3-208ENST00000394803 COL4A3BPQ9Y5P4 624 aa11.1□□□□□ -0.63
UBE2D3-208ENST00000394803 COL4A1P02462 1669 aa11.1□□□□□ -0.63
UBE2D3-208ENST00000394803 ZNF263O14978 683 aa11.09□□□□□ -0.63
UBE2D3-208ENST00000394803 ADAMTS3O15072 1205 aa11.09□□□□□ -0.63
UBE2D3-208ENST00000394803 ZEB2O60315 1214 aa11.09□□□□□ -0.63
UBE2D3-208ENST00000394803 GCFC2P16383 781 aaKnown RBP11.09□□□□□ -0.63
UBE2D3-208ENST00000394803 RASA1P20936 1047 aa11.09□□□□□ -0.63
UBE2D3-208ENST00000394803 ADCY7P51828 1080 aa11.09□□□□□ -0.63
UBE2D3-208ENST00000394803 CCDC40Q4G0X9 1142 aa11.09□□□□□ -0.63
UBE2D3-208ENST00000394803 ASPRV1Q53RT3 343 aa11.09□□□□□ -0.63
UBE2D3-208ENST00000394803 CFAP58Q5T655 872 aa11.09□□□□□ -0.63
UBE2D3-208ENST00000394803 NBPF5PQ86XG9 351 aaPredicted RBP11.09□□□□□ -0.63
UBE2D3-208ENST00000394803 MTMR9Q96QG7 549 aa11.09□□□□□ -0.63
UBE2D3-208ENST00000394803 EYA3Q99504 573 aa11.09□□□□□ -0.63
UBE2D3-208ENST00000394803 GLT8D2Q9H1C3 349 aa11.09□□□□□ -0.63
UBE2D3-208ENST00000394803 TFCP2L1Q9NZI6 479 aa11.09□□□□□ -0.63
UBE2D3-208ENST00000394803 DUSP10Q9Y6W6 482 aa11.09□□□□□ -0.63
UBE2D3-208ENST00000394803 ATP8B3O60423 1300 aa11.09□□□□□ -0.63
UBE2D3-208ENST00000394803 USP17L3A6NCW0 530 aa11.09□□□□□ -0.63
UBE2D3-208ENST00000394803 USP17L4A6NCW7 530 aa11.09□□□□□ -0.63
UBE2D3-208ENST00000394803 ANXA13P27216 316 aa11.09□□□□□ -0.63
UBE2D3-208ENST00000394803 TXKP42681 527 aa11.09□□□□□ -0.63
UBE2D3-208ENST00000394803 GRB10Q13322 594 aa11.09□□□□□ -0.63
UBE2D3-208ENST00000394803 HAUS3Q68CZ6 603 aa11.09□□□□□ -0.63
UBE2D3-208ENST00000394803 PPP4R3CPQ6ZMV5 832 aa11.09□□□□□ -0.63
UBE2D3-208ENST00000394803 C15orf52Q6ZUT6 534 aaKnown RBP11.09□□□□□ -0.63
UBE2D3-208ENST00000394803 USP17L1Q7RTZ2 530 aa11.09□□□□□ -0.63
UBE2D3-208ENST00000394803 CD302Q8IX05 232 aa11.09□□□□□ -0.63
UBE2D3-208ENST00000394803 SH3RF3Q8TEJ3 882 aaPredicted RBP11.09□□□□□ -0.63
UBE2D3-208ENST00000394803 BAP1Q92560 729 aa11.09□□□□□ -0.63
UBE2D3-208ENST00000394803 TAF4BQ92750 862 aa11.09□□□□□ -0.63
UBE2D3-208ENST00000394803 MMTAG2Q9BU76 263 aaKnown RBP11.09□□□□□ -0.63
UBE2D3-208ENST00000394803 TFR2Q9UP52 801 aa11.09□□□□□ -0.63
UBE2D3-208ENST00000394803 BTNL10A8MVZ5 291 aa11.08□□□□□ -0.64
UBE2D3-208ENST00000394803 ZMYND10O75800 440 aa11.08□□□□□ -0.64
UBE2D3-208ENST00000394803 KIAA0754O94854 1291 aa11.08□□□□□ -0.64
UBE2D3-208ENST00000394803 MYBL2P10244 700 aa11.08□□□□□ -0.64
UBE2D3-208ENST00000394803 HSPA1LP34931 641 aa11.08□□□□□ -0.64
UBE2D3-208ENST00000394803 EPS15P42566 896 aa11.08□□□□□ -0.64
UBE2D3-208ENST00000394803 MARSP56192 900 aaKnown RBP11.08□□□□□ -0.64
UBE2D3-208ENST00000394803 ASTE1Q2TB18 679 aaPredicted RBP11.08□□□□□ -0.64
UBE2D3-208ENST00000394803 PPP4R3AQ6IN85 833 aa11.08□□□□□ -0.64
UBE2D3-208ENST00000394803 C3orf67Q6ZVT6 689 aa11.08□□□□□ -0.64
UBE2D3-208ENST00000394803 KRT26Q7Z3Y9 468 aa11.08□□□□□ -0.64
UBE2D3-208ENST00000394803 CCDC65Q8IXS2 484 aa11.08□□□□□ -0.64
UBE2D3-208ENST00000394803 ARFGAP2Q8N6H7 521 aa11.08□□□□□ -0.64
UBE2D3-208ENST00000394803 BCAS4Q8TDM0 211 aa11.08□□□□□ -0.64
UBE2D3-208ENST00000394803 SNX29Q8TEQ0 813 aa11.08□□□□□ -0.64
UBE2D3-208ENST00000394803 DYNLL2Q96FJ2 89 aa11.08□□□□□ -0.64
UBE2D3-208ENST00000394803 ACSBG1Q96GR2 724 aa11.08□□□□□ -0.64
UBE2D3-208ENST00000394803 RIOX1Q9H6W3 641 aa11.08□□□□□ -0.64
UBE2D3-208ENST00000394803 MLXIPQ9HAP2 919 aa11.08□□□□□ -0.64
UBE2D3-208ENST00000394803 GDF3Q9NR23 364 aa11.08□□□□□ -0.64
UBE2D3-208ENST00000394803 BLOC1S4Q9NUP1 217 aa11.08□□□□□ -0.64
UBE2D3-208ENST00000394803 NARFQ9UHQ1 456 aa11.08□□□□□ -0.64
UBE2D3-208ENST00000394803 BZW2Q9Y6E2 419 aaKnown RBP11.08□□□□□ -0.64
UBE2D3-208ENST00000394803 MYMKA6NI61 221 aa11.08□□□□□ -0.64
UBE2D3-208ENST00000394803 GOLGA6L10A6NI86 522 aa11.08□□□□□ -0.64
UBE2D3-208ENST00000394803 GNGT1P63211 74 aa11.08□□□□□ -0.64
UBE2D3-208ENST00000394803 NAB2Q15742 525 aa11.08□□□□□ -0.64
UBE2D3-208ENST00000394803 TMEM119Q4V9L6 283 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms