RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 PTGS1P23219 599 aa16.8■□□□□ 0.28
CCT4-201ENST00000394440 KMT5BQ4FZB7 885 aa16.8■□□□□ 0.28
CCT4-201ENST00000394440 SAMD1Q6SPF0 538 aaPredicted RBP16.8■□□□□ 0.28
CCT4-201ENST00000394440 CCDC186Q7Z3E2 898 aa16.8■□□□□ 0.28
CCT4-201ENST00000394440 DRC7Q8IY82 874 aa16.8■□□□□ 0.28
CCT4-201ENST00000394440 CLEC4DQ8WXI8 215 aa16.8■□□□□ 0.28
CCT4-201ENST00000394440 TANGO6Q9C0B7 1094 aa16.8■□□□□ 0.28
CCT4-201ENST00000394440 C1QTNF8P60827 252 aa16.79■□□□□ 0.28
CCT4-201ENST00000394440 ECM1Q16610 540 aa16.79■□□□□ 0.28
CCT4-201ENST00000394440 LARP4BQ92615 738 aaKnown RBP16.79■□□□□ 0.28
CCT4-201ENST00000394440 FAM20AQ96MK3 541 aa16.79■□□□□ 0.28
CCT4-201ENST00000394440 RTN4Q9NQC3 1192 aaKnown RBP16.79■□□□□ 0.28
CCT4-201ENST00000394440 MARCH6O60337 910 aa16.79■□□□□ 0.28
CCT4-201ENST00000394440 FLOT1O75955 427 aa16.79■□□□□ 0.28
CCT4-201ENST00000394440 SPATA1Q5VX52 437 aa16.79■□□□□ 0.28
CCT4-201ENST00000394440 KCNK18Q7Z418 384 aa16.79■□□□□ 0.28
CCT4-201ENST00000394440 RAD54LQ92698 747 aa16.79■□□□□ 0.28
CCT4-201ENST00000394440 GDAQ9Y2T3 454 aa16.79■□□□□ 0.28
CCT4-201ENST00000394440 KDM3AQ9Y4C1 1321 aa16.79■□□□□ 0.28
CCT4-201ENST00000394440 MSH4O15457 936 aa16.78■□□□□ 0.28
CCT4-201ENST00000394440 USP2O75604 605 aaPredicted RBP16.78■□□□□ 0.28
CCT4-201ENST00000394440 AMPD3Q01432 767 aa16.78■□□□□ 0.28
CCT4-201ENST00000394440 CDK5RAP3Q96JB5 506 aa16.78■□□□□ 0.28
CCT4-201ENST00000394440 ZHX2Q9Y6X8 837 aa16.78■□□□□ 0.28
CCT4-201ENST00000394440 LOC285556D6RIA3 1793 aa16.78■□□□□ 0.28
CCT4-201ENST00000394440 C19orf81C9J6K1 198 aa16.78■□□□□ 0.28
CCT4-201ENST00000394440 FDX1P10109 184 aa16.78■□□□□ 0.28
CCT4-201ENST00000394440 KLHL10Q6JEL2 608 aa16.78■□□□□ 0.28
CCT4-201ENST00000394440 CNNM4Q6P4Q7 775 aa16.78■□□□□ 0.28
CCT4-201ENST00000394440 GIMAP8Q8ND71 665 aaPredicted RBP16.78■□□□□ 0.28
CCT4-201ENST00000394440 CYP2W1Q8TAV3 490 aa16.78■□□□□ 0.28
CCT4-201ENST00000394440 L3MBTL3Q96JM7 780 aaPredicted RBP16.78■□□□□ 0.28
CCT4-201ENST00000394440 SAMSN1Q9NSI8 373 aaKnown RBP16.78■□□□□ 0.28
CCT4-201ENST00000394440 NFIBO00712 420 aa16.77■□□□□ 0.28
CCT4-201ENST00000394440 MCM6Q14566 821 aa16.77■□□□□ 0.28
CCT4-201ENST00000394440 CDKAL1Q5VV42 579 aa16.77■□□□□ 0.28
CCT4-201ENST00000394440 SV2BQ7L1I2 683 aa16.77■□□□□ 0.28
CCT4-201ENST00000394440 ADSSL1Q8N142 457 aa16.77■□□□□ 0.28
CCT4-201ENST00000394440 NT5C3AQ9H0P0 336 aa16.77■□□□□ 0.28
CCT4-201ENST00000394440 RWDD2AQ9UIY3 292 aa16.77■□□□□ 0.28
CCT4-201ENST00000394440 RPTORQ8N122 1335 aa16.77■□□□□ 0.28
CCT4-201ENST00000394440 PRCPP42785 496 aa16.77■□□□□ 0.28
CCT4-201ENST00000394440 EHMT1Q9H9B1 1298 aa16.77■□□□□ 0.28
CCT4-201ENST00000394440 RAVER2Q9HCJ3 691 aaKnown RBP16.77■□□□□ 0.28
CCT4-201ENST00000394440 VAV3Q9UKW4 847 aa16.77■□□□□ 0.28
CCT4-201ENST00000394440 PNMA2Q9UL42 364 aa16.77■□□□□ 0.28
CCT4-201ENST00000394440 CTNND2Q9UQB3 1225 aa16.77■□□□□ 0.28
CCT4-201ENST00000394440 MYMKA6NI61 221 aa16.76■□□□□ 0.27
CCT4-201ENST00000394440 HMGCS2P54868 508 aa16.76■□□□□ 0.27
CCT4-201ENST00000394440 STX17P56962 302 aa16.76■□□□□ 0.27
CCT4-201ENST00000394440 UBASH3AP57075 661 aa16.76■□□□□ 0.27
CCT4-201ENST00000394440 PAK1Q13153 545 aa16.76■□□□□ 0.27
CCT4-201ENST00000394440 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.76■□□□□ 0.27
CCT4-201ENST00000394440 REPS2Q8NFH8 660 aa16.76■□□□□ 0.27
CCT4-201ENST00000394440 UIMC1Q96RL1 719 aa16.76■□□□□ 0.27
CCT4-201ENST00000394440 INTS13Q9NVM9 706 aa16.76■□□□□ 0.27
CCT4-201ENST00000394440 COL20A1Q9P218 1284 aa16.76■□□□□ 0.27
CCT4-201ENST00000394440 IMPACTQ9P2X3 320 aa16.76■□□□□ 0.27
CCT4-201ENST00000394440 ADAMTS5Q9UNA0 930 aa16.76■□□□□ 0.27
CCT4-201ENST00000394440 AFG3L2Q9Y4W6 797 aa16.76■□□□□ 0.27
CCT4-201ENST00000394440 SNCAIPQ9Y6H5 919 aa16.76■□□□□ 0.27
CCT4-201ENST00000394440 SCN4AP35499 1836 aa16.76■□□□□ 0.27
CCT4-201ENST00000394440 VWA5AO00534 786 aa16.76■□□□□ 0.27
CCT4-201ENST00000394440 CBFA2T2O43439 604 aa16.76■□□□□ 0.27
CCT4-201ENST00000394440 CCT6AP40227 531 aaKnown RBP16.76■□□□□ 0.27
CCT4-201ENST00000394440 STAT3P40763 770 aa16.76■□□□□ 0.27
CCT4-201ENST00000394440 DLK2Q6UY11 383 aa16.76■□□□□ 0.27
CCT4-201ENST00000394440 APTXQ7Z2E3 356 aaKnown RBP16.76■□□□□ 0.27
CCT4-201ENST00000394440 SAMD3Q8N6K7 520 aa16.76■□□□□ 0.27
CCT4-201ENST00000394440 DCPSQ96C86 337 aaKnown RBP16.76■□□□□ 0.27
CCT4-201ENST00000394440 ATG4CQ96DT6 458 aa16.76■□□□□ 0.27
CCT4-201ENST00000394440 NAP1L5Q96NT1 182 aaPredicted RBP16.76■□□□□ 0.27
CCT4-201ENST00000394440 GPBP1L1Q9HC44 474 aaPredicted RBP16.76■□□□□ 0.27
CCT4-201ENST00000394440 MAP3K20Q9NYL2 800 aaKnown RBP16.76■□□□□ 0.27
CCT4-201ENST00000394440 ADM5C9JUS6 153 aa16.75■□□□□ 0.27
CCT4-201ENST00000394440 SERPINC1P01008 464 aa16.75■□□□□ 0.27
CCT4-201ENST00000394440 ASIC1P78348 528 aa16.75■□□□□ 0.27
CCT4-201ENST00000394440 MUM1L1Q5H9M0 696 aa16.75■□□□□ 0.27
CCT4-201ENST00000394440 SH3D19Q5HYK7 790 aa16.75■□□□□ 0.27
CCT4-201ENST00000394440 MCF2L2Q86YR7 1114 aa16.75■□□□□ 0.27
CCT4-201ENST00000394440 CPXCR1Q8N123 301 aa16.75■□□□□ 0.27
CCT4-201ENST00000394440 ZNF526Q8TF50 670 aaPredicted RBP16.75■□□□□ 0.27
CCT4-201ENST00000394440 WNK4Q96J92 1243 aa16.75■□□□□ 0.27
CCT4-201ENST00000394440 FRMPD4Q14CM0 1322 aa16.75■□□□□ 0.27
CCT4-201ENST00000394440 A0A0G2JMZ2 1700 aa16.75■□□□□ 0.27
CCT4-201ENST00000394440 MED24O75448 989 aa16.75■□□□□ 0.27
CCT4-201ENST00000394440 ALAS1P13196 640 aa16.75■□□□□ 0.27
CCT4-201ENST00000394440 ZNF76P36508 570 aa16.75■□□□□ 0.27
CCT4-201ENST00000394440 COBLL1Q53SF7 1204 aa16.75■□□□□ 0.27
CCT4-201ENST00000394440 HAUS3Q68CZ6 603 aa16.75■□□□□ 0.27
CCT4-201ENST00000394440 SULF1Q8IWU6 871 aa16.75■□□□□ 0.27
CCT4-201ENST00000394440 CACTINQ8WUQ7 758 aaKnown RBP16.75■□□□□ 0.27
CCT4-201ENST00000394440 RABGAP1Q9Y3P9 1069 aa16.75■□□□□ 0.27
CCT4-201ENST00000394440 PVALEFA0A1B0GWK0 134 aa16.74■□□□□ 0.27
CCT4-201ENST00000394440 POTEB3A0JP26 581 aa16.74■□□□□ 0.27
CCT4-201ENST00000394440 POTECB2RU33 542 aa16.74■□□□□ 0.27
CCT4-201ENST00000394440 ZBED4O75132 1171 aa16.74■□□□□ 0.27
CCT4-201ENST00000394440 VGLL4Q14135 290 aa16.74■□□□□ 0.27
CCT4-201ENST00000394440 CEP55Q53EZ4 464 aa16.74■□□□□ 0.27
CCT4-201ENST00000394440 HSP90AA4PQ58FG1 418 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms