RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 TRIM67Q6ZTA4 783 aa12.88□□□□□ -0.35
VTI1BP2-201ENST00000394154 EP400NLQ6ZTU2 488 aa12.88□□□□□ -0.35
VTI1BP2-201ENST00000394154 TMCO2Q7Z6W1 182 aaPredicted RBP12.88□□□□□ -0.35
VTI1BP2-201ENST00000394154 FBXL6Q8N531 539 aa12.88□□□□□ -0.35
VTI1BP2-201ENST00000394154 CHST13Q8NET6 341 aa12.88□□□□□ -0.35
VTI1BP2-201ENST00000394154 PDRG1Q9NUG6 133 aa12.88□□□□□ -0.35
VTI1BP2-201ENST00000394154 CTDP1Q9Y5B0 961 aaPredicted RBP12.88□□□□□ -0.35
VTI1BP2-201ENST00000394154 PTPRZ1P23471 2315 aaPredicted RBP12.87□□□□□ -0.35
VTI1BP2-201ENST00000394154 E7EWF7 191 aa12.87□□□□□ -0.35
VTI1BP2-201ENST00000394154 K7ELQ4 463 aaPredicted RBP12.87□□□□□ -0.35
VTI1BP2-201ENST00000394154 ZBED4O75132 1171 aa12.87□□□□□ -0.35
VTI1BP2-201ENST00000394154 DEFB103AP81534 67 aa12.87□□□□□ -0.35
VTI1BP2-201ENST00000394154 TRDNQ13061 729 aa12.87□□□□□ -0.35
VTI1BP2-201ENST00000394154 SMAD2Q15796 467 aaKnown RBP12.87□□□□□ -0.35
VTI1BP2-201ENST00000394154 IQSEC1Q6DN90 963 aa12.87□□□□□ -0.35
VTI1BP2-201ENST00000394154 CPXCR1Q8N123 301 aa12.87□□□□□ -0.35
VTI1BP2-201ENST00000394154 BANK1Q8NDB2 785 aa12.87□□□□□ -0.35
VTI1BP2-201ENST00000394154 SDR42E1Q8WUS8 393 aa12.87□□□□□ -0.35
VTI1BP2-201ENST00000394154 KANSL2Q9H9L4 492 aa12.87□□□□□ -0.35
VTI1BP2-201ENST00000394154 EPB41L4AQ9HCS5 686 aaPredicted RBP12.87□□□□□ -0.35
VTI1BP2-201ENST00000394154 LAMA4Q16363 1823 aa12.87□□□□□ -0.35
VTI1BP2-201ENST00000394154 NCK2O43639 380 aa12.86□□□□□ -0.35
VTI1BP2-201ENST00000394154 PTGS1P23219 599 aa12.86□□□□□ -0.35
VTI1BP2-201ENST00000394154 RPS6KB1P23443 525 aa12.86□□□□□ -0.35
VTI1BP2-201ENST00000394154 ID4P47928 161 aa12.86□□□□□ -0.35
VTI1BP2-201ENST00000394154 PURAQ00577 322 aaKnown RBP12.86□□□□□ -0.35
VTI1BP2-201ENST00000394154 CNTN2Q02246 1040 aa12.86□□□□□ -0.35
VTI1BP2-201ENST00000394154 ANKRD1Q15327 319 aa12.86□□□□□ -0.35
VTI1BP2-201ENST00000394154 FAM47CQ5HY64 1035 aa12.86□□□□□ -0.35
VTI1BP2-201ENST00000394154 CNKSR3Q6P9H4 555 aa12.86□□□□□ -0.35
VTI1BP2-201ENST00000394154 RALYLQ86SE5 291 aaKnown RBP12.86□□□□□ -0.35
VTI1BP2-201ENST00000394154 AMOTL1Q8IY63 956 aa12.86□□□□□ -0.35
VTI1BP2-201ENST00000394154 FAM133AQ8N9E0 248 aa12.86□□□□□ -0.35
VTI1BP2-201ENST00000394154 PRPF38AQ8NAV1 312 aaKnown RBP12.86□□□□□ -0.35
VTI1BP2-201ENST00000394154 NCOA7Q8NI08 942 aa12.86□□□□□ -0.35
VTI1BP2-201ENST00000394154 RNF41Q9H4P4 317 aaPredicted RBP12.86□□□□□ -0.35
VTI1BP2-201ENST00000394154 ALG13Q9NP73 1137 aaKnown RBP12.86□□□□□ -0.35
VTI1BP2-201ENST00000394154 TAF6LQ9Y6J9 622 aa12.86□□□□□ -0.35
VTI1BP2-201ENST00000394154 CACNA1HO95180 2353 aa12.86□□□□□ -0.35
VTI1BP2-201ENST00000394154 MINDY4BA8MYZ0 360 aa12.85□□□□□ -0.35
VTI1BP2-201ENST00000394154 USP17L12C9JPN9 530 aa12.85□□□□□ -0.35
VTI1BP2-201ENST00000394154 USP17L21D6R901 530 aa12.85□□□□□ -0.35
VTI1BP2-201ENST00000394154 EFCAB14O75071 495 aa12.85□□□□□ -0.35
VTI1BP2-201ENST00000394154 CD2BP2O95400 341 aaKnown RBP12.85□□□□□ -0.35
VTI1BP2-201ENST00000394154 SLC3A2P08195 630 aaKnown RBP12.85□□□□□ -0.35
VTI1BP2-201ENST00000394154 TCEAL5Q5H9L2 206 aa12.85□□□□□ -0.35
VTI1BP2-201ENST00000394154 NFRKBQ6P4R8 1299 aa12.85□□□□□ -0.35
VTI1BP2-201ENST00000394154 STOX1Q6ZVD7 989 aa12.85□□□□□ -0.35
VTI1BP2-201ENST00000394154 DHX32Q7L7V1 743 aaKnown RBP12.85□□□□□ -0.35
VTI1BP2-201ENST00000394154 CCDC155Q8N6L0 562 aa12.85□□□□□ -0.35
VTI1BP2-201ENST00000394154 AFAP1L1Q8TED9 768 aa12.85□□□□□ -0.35
VTI1BP2-201ENST00000394154 DYNLL2Q96FJ2 89 aa12.85□□□□□ -0.35
VTI1BP2-201ENST00000394154 TTC14Q96N46 770 aa12.85□□□□□ -0.35
VTI1BP2-201ENST00000394154 SAMD11Q96NU1 681 aa12.85□□□□□ -0.35
VTI1BP2-201ENST00000394154 C17orf80Q9BSJ5 609 aa12.85□□□□□ -0.35
VTI1BP2-201ENST00000394154 MTG1Q9BT17 334 aaPredicted RBP12.85□□□□□ -0.35
VTI1BP2-201ENST00000394154 NSUN3Q9H649 340 aaKnown RBP12.85□□□□□ -0.35
VTI1BP2-201ENST00000394154 CNNM2Q9H8M5 875 aa12.85□□□□□ -0.35
VTI1BP2-201ENST00000394154 RAVER2Q9HCJ3 691 aaKnown RBP12.85□□□□□ -0.35
VTI1BP2-201ENST00000394154 DCP1AQ9NPI6 582 aaPredicted RBP12.85□□□□□ -0.35
VTI1BP2-201ENST00000394154 GPHNQ9NQX3 736 aaPredicted RBP12.85□□□□□ -0.35
VTI1BP2-201ENST00000394154 CLDND1Q9NY35 253 aa12.85□□□□□ -0.35
VTI1BP2-201ENST00000394154 ANAPC4Q9UJX5 808 aa12.85□□□□□ -0.35
VTI1BP2-201ENST00000394154 SCN10AQ9Y5Y9 1956 aa12.85□□□□□ -0.35
VTI1BP2-201ENST00000394154 MYO15AQ9UKN7 3530 aa12.84□□□□□ -0.35
VTI1BP2-201ENST00000394154 ABHD14A-ACY1A0A1B0GW23 586 aa12.84□□□□□ -0.35
VTI1BP2-201ENST00000394154 PARNO95453 639 aaKnown RBP12.84□□□□□ -0.35
VTI1BP2-201ENST00000394154 HSP90AA1P07900 732 aaKnown RBP12.84□□□□□ -0.35
VTI1BP2-201ENST00000394154 CYP2D6P10635 497 aa12.84□□□□□ -0.35
VTI1BP2-201ENST00000394154 CPA1P15085 419 aa12.84□□□□□ -0.35
VTI1BP2-201ENST00000394154 CPT1AP50416 773 aa12.84□□□□□ -0.35
VTI1BP2-201ENST00000394154 OAZ1P54368 228 aa12.84□□□□□ -0.35
VTI1BP2-201ENST00000394154 FGD1P98174 961 aa12.84□□□□□ -0.35
VTI1BP2-201ENST00000394154 PTPN11Q06124 597 aaPredicted RBP12.84□□□□□ -0.35
VTI1BP2-201ENST00000394154 PPARAQ07869 468 aa12.84□□□□□ -0.35
VTI1BP2-201ENST00000394154 NBPF20Q3BBV1 942 aa12.84□□□□□ -0.35
VTI1BP2-201ENST00000394154 SBK1Q52WX2 424 aa12.84□□□□□ -0.35
VTI1BP2-201ENST00000394154 TAPT1Q6NXT6 567 aa12.84□□□□□ -0.35
VTI1BP2-201ENST00000394154 MFSD6Q6ZSS7 791 aa12.84□□□□□ -0.35
VTI1BP2-201ENST00000394154 ASCL5Q7RTU5 278 aa12.84□□□□□ -0.35
VTI1BP2-201ENST00000394154 CAGE1Q8TC20 777 aa12.84□□□□□ -0.35
VTI1BP2-201ENST00000394154 ZSCAN31Q96LW9 406 aaPredicted RBP12.84□□□□□ -0.35
VTI1BP2-201ENST00000394154 NUP88Q99567 741 aaPredicted RBP12.84□□□□□ -0.35
VTI1BP2-201ENST00000394154 KRT23Q9C075 422 aa12.84□□□□□ -0.35
VTI1BP2-201ENST00000394154 SLC38A10Q9HBR0 1119 aa12.84□□□□□ -0.35
VTI1BP2-201ENST00000394154 PDGFCQ9NRA1 345 aa12.84□□□□□ -0.35
VTI1BP2-201ENST00000394154 ARPP21Q9UBL0 812 aaPredicted RBP12.84□□□□□ -0.35
VTI1BP2-201ENST00000394154 LIMCH1Q9UPQ0 1083 aa12.84□□□□□ -0.35
VTI1BP2-201ENST00000394154 NOD1Q9Y239 953 aa12.84□□□□□ -0.35
VTI1BP2-201ENST00000394154 INSL6Q9Y581 213 aa12.84□□□□□ -0.35
VTI1BP2-201ENST00000394154 CACNA1BQ00975 2339 aa12.84□□□□□ -0.35
VTI1BP2-201ENST00000394154 SOWAHBA6NEL2 793 aa12.83□□□□□ -0.36
VTI1BP2-201ENST00000394154 PRR23AA6NEV1 266 aa12.83□□□□□ -0.36
VTI1BP2-201ENST00000394154 STXBP3O00186 592 aa12.83□□□□□ -0.36
VTI1BP2-201ENST00000394154 MBTPS2O43462 519 aa12.83□□□□□ -0.36
VTI1BP2-201ENST00000394154 MYL3P08590 195 aa12.83□□□□□ -0.36
VTI1BP2-201ENST00000394154 PCP11498 1178 aaKnown RBP12.83□□□□□ -0.36
VTI1BP2-201ENST00000394154 MCM5P33992 734 aa12.83□□□□□ -0.36
VTI1BP2-201ENST00000394154 NUBP1P53384 320 aa12.83□□□□□ -0.36
VTI1BP2-201ENST00000394154 AK2P54819 239 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms