RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 ABCB11O95342 1321 aa18.01■□□□□ 0.47
CHMP3-202ENST00000393773 KIF28PB7ZC32 967 aa18.01■□□□□ 0.47
CHMP3-202ENST00000393773 RBAK-RBAKDNI3L0D1 243 aa18.01■□□□□ 0.47
CHMP3-202ENST00000393773 GH1P01241 217 aa18.01■□□□□ 0.47
CHMP3-202ENST00000393773 SELPP16109 830 aa18.01■□□□□ 0.47
CHMP3-202ENST00000393773 CHMP4BP1P59074 171 aa18.01■□□□□ 0.47
CHMP3-202ENST00000393773 ANKRD45Q5TZF3 282 aa18.01■□□□□ 0.47
CHMP3-202ENST00000393773 LRRC8DQ7L1W4 858 aa18.01■□□□□ 0.47
CHMP3-202ENST00000393773 SYTL5Q8TDW5 730 aaPredicted RBP18.01■□□□□ 0.47
CHMP3-202ENST00000393773 TBC1D5Q92609 795 aa18.01■□□□□ 0.47
CHMP3-202ENST00000393773 ZKSCAN3Q9BRR0 538 aa18.01■□□□□ 0.47
CHMP3-202ENST00000393773 UBA5Q9GZZ9 404 aa18.01■□□□□ 0.47
CHMP3-202ENST00000393773 GTF2IRD1Q9UHL9 959 aa18.01■□□□□ 0.47
CHMP3-202ENST00000393773 COL4A6Q14031 1691 aa18■□□□□ 0.47
CHMP3-202ENST00000393773 NBNO60934 754 aa18■□□□□ 0.47
CHMP3-202ENST00000393773 CNKSR3Q6P9H4 555 aa18■□□□□ 0.47
CHMP3-202ENST00000393773 TRAF7Q6Q0C0 670 aa18■□□□□ 0.47
CHMP3-202ENST00000393773 SEPT14Q6ZU15 432 aa18■□□□□ 0.47
CHMP3-202ENST00000393773 DGKHQ86XP1 1220 aa18■□□□□ 0.47
CHMP3-202ENST00000393773 HLA-CQ95604 372 aa18■□□□□ 0.47
CHMP3-202ENST00000393773 TAAR1Q96RJ0 339 aa18■□□□□ 0.47
CHMP3-202ENST00000393773 F2P00734 622 aa17.99■□□□□ 0.47
CHMP3-202ENST00000393773 CKBP12277 381 aa17.99■□□□□ 0.47
CHMP3-202ENST00000393773 TRIM71Q2Q1W2 868 aaKnown RBP17.99■□□□□ 0.47
CHMP3-202ENST00000393773 PNMA1Q8ND90 353 aa17.99■□□□□ 0.47
CHMP3-202ENST00000393773 NSUN6Q8TEA1 469 aaKnown RBP17.99■□□□□ 0.47
CHMP3-202ENST00000393773 ESR2Q92731 530 aa17.99■□□□□ 0.47
CHMP3-202ENST00000393773 WNT8BQ93098 351 aa17.99■□□□□ 0.47
CHMP3-202ENST00000393773 EMID1Q96A84 441 aaPredicted RBP17.99■□□□□ 0.47
CHMP3-202ENST00000393773 FAM122AQ96E09 287 aa17.99■□□□□ 0.47
CHMP3-202ENST00000393773 RNF41Q9H4P4 317 aaPredicted RBP17.99■□□□□ 0.47
CHMP3-202ENST00000393773 EPHX3Q9H6B9 360 aa17.99■□□□□ 0.47
CHMP3-202ENST00000393773 HAS3O00219 553 aa17.98■□□□□ 0.47
CHMP3-202ENST00000393773 GJB5O95377 273 aa17.98■□□□□ 0.47
CHMP3-202ENST00000393773 QRICH1Q2TAL8 776 aa17.98■□□□□ 0.47
CHMP3-202ENST00000393773 CHST3Q7LGC8 479 aa17.98■□□□□ 0.47
CHMP3-202ENST00000393773 ADGRF4Q8IZF3 695 aa17.98■□□□□ 0.47
CHMP3-202ENST00000393773 KHSRPQ92945 711 aaKnown RBP eCLIP17.98■□□□□ 0.475e-6■■■■□ 19.6
CHMP3-202ENST00000393773 IWS1Q96ST2 819 aa17.98■□□□□ 0.47
CHMP3-202ENST00000393773 RMDN3Q96TC7 470 aa17.98■□□□□ 0.47
CHMP3-202ENST00000393773 HDAC6Q9UBN7 1215 aa17.98■□□□□ 0.47
CHMP3-202ENST00000393773 ZBTB47Q9UFB7 747 aaPredicted RBP17.98■□□□□ 0.47
CHMP3-202ENST00000393773 DDX41Q9UJV9 622 aaKnown RBP17.98■□□□□ 0.47
CHMP3-202ENST00000393773 OPLAHO14841 1288 aa17.97■□□□□ 0.47
CHMP3-202ENST00000393773 PARNO95453 639 aaKnown RBP17.97■□□□□ 0.47
CHMP3-202ENST00000393773 ZNF286BP0CG31 522 aa17.97■□□□□ 0.47
CHMP3-202ENST00000393773 HOXD8P13378 290 aaPredicted RBP17.97■□□□□ 0.47
CHMP3-202ENST00000393773 CASTP20810 708 aaKnown RBP17.97■□□□□ 0.47
CHMP3-202ENST00000393773 PSEN2P49810 448 aa17.97■□□□□ 0.47
CHMP3-202ENST00000393773 RRP1P56182 461 aaKnown RBP17.97■□□□□ 0.47
CHMP3-202ENST00000393773 HDAC1Q13547 482 aaPredicted RBP17.97■□□□□ 0.47
CHMP3-202ENST00000393773 MBTPS1Q14703 1052 aa17.97■□□□□ 0.47
CHMP3-202ENST00000393773 STXBP2Q15833 593 aa17.97■□□□□ 0.47
CHMP3-202ENST00000393773 DGKDQ16760 1214 aa17.97■□□□□ 0.47
CHMP3-202ENST00000393773 ASPRV1Q53RT3 343 aa17.97■□□□□ 0.47
CHMP3-202ENST00000393773 PPTC7Q8NI37 304 aa17.97■□□□□ 0.47
CHMP3-202ENST00000393773 LRFN3Q9BTN0 628 aa17.97■□□□□ 0.47
CHMP3-202ENST00000393773 LMCD1Q9NZU5 365 aa17.97■□□□□ 0.47
CHMP3-202ENST00000393773 LINC01553A4QN01 128 aa17.96■□□□□ 0.47
CHMP3-202ENST00000393773 KDM4AO75164 1064 aa17.96■□□□□ 0.47
CHMP3-202ENST00000393773 EIF2AK2P19525 551 aaKnown RBP17.96■□□□□ 0.47
CHMP3-202ENST00000393773 NT5C2P49902 561 aa17.96■□□□□ 0.47
CHMP3-202ENST00000393773 GHRHRQ02643 423 aa17.96■□□□□ 0.47
CHMP3-202ENST00000393773 PTK7Q13308 1070 aa17.96■□□□□ 0.47
CHMP3-202ENST00000393773 MKRN4PQ13434 485 aaPredicted RBP17.96■□□□□ 0.47
CHMP3-202ENST00000393773 MFSD10Q14728 455 aa17.96■□□□□ 0.47
CHMP3-202ENST00000393773 MCF2L2Q86YR7 1114 aa17.96■□□□□ 0.47
CHMP3-202ENST00000393773 ENAHQ8N8S7 591 aaPredicted RBP17.96■□□□□ 0.47
CHMP3-202ENST00000393773 ANKS1AQ92625 1134 aa17.96■□□□□ 0.47
CHMP3-202ENST00000393773 KATNAL1Q9BW62 490 aa17.96■□□□□ 0.47
CHMP3-202ENST00000393773 C11orf16Q9NQ32 467 aa17.96■□□□□ 0.47
CHMP3-202ENST00000393773 PXMP2Q9NR77 195 aa17.96■□□□□ 0.47
CHMP3-202ENST00000393773 ABHD14A-ACY1A0A1B0GW23 586 aa17.95■□□□□ 0.46
CHMP3-202ENST00000393773 ERVK-21P61565 698 aa17.95■□□□□ 0.46
CHMP3-202ENST00000393773 HIC1Q14526 733 aa17.95■□□□□ 0.46
CHMP3-202ENST00000393773 KIAA0753Q2KHM9 967 aa17.95■□□□□ 0.46
CHMP3-202ENST00000393773 C7orf31Q8N865 590 aa17.95■□□□□ 0.46
CHMP3-202ENST00000393773 CRBNQ96SW2 442 aa17.95■□□□□ 0.46
CHMP3-202ENST00000393773 RAD9AQ99638 391 aa17.95■□□□□ 0.46
CHMP3-202ENST00000393773 ALG1Q9BT22 464 aa17.95■□□□□ 0.46
CHMP3-202ENST00000393773 ZBED2Q9BTP6 218 aa17.95■□□□□ 0.46
CHMP3-202ENST00000393773 KAT14Q9H8E8 782 aa17.95■□□□□ 0.46
CHMP3-202ENST00000393773 JMJD4Q9H9V9 463 aa17.95■□□□□ 0.46
CHMP3-202ENST00000393773 SUGCTQ9HAC7 445 aa17.95■□□□□ 0.46
CHMP3-202ENST00000393773 MTUS1Q9ULD2 1270 aa17.95■□□□□ 0.46
CHMP3-202ENST00000393773 MRVI1Q9Y6F6 885 aa17.95■□□□□ 0.46
CHMP3-202ENST00000393773 BAZ2BQ9UIF8 2168 aaKnown RBP17.94■□□□□ 0.46
CHMP3-202ENST00000393773 TRIM6-TRIM34B2RNG4 842 aa17.94■□□□□ 0.46
CHMP3-202ENST00000393773 ZNF213O14771 459 aa17.94■□□□□ 0.46
CHMP3-202ENST00000393773 EFCAB14O75071 495 aa17.94■□□□□ 0.46
CHMP3-202ENST00000393773 EIF3JO75822 258 aaKnown RBP17.94■□□□□ 0.46
CHMP3-202ENST00000393773 RGS20O76081 388 aa17.94■□□□□ 0.46
CHMP3-202ENST00000393773 SDSP20132 328 aa17.94■□□□□ 0.46
CHMP3-202ENST00000393773 HOXD11P31277 338 aaPredicted RBP17.94■□□□□ 0.46
CHMP3-202ENST00000393773 HSD17B4P51659 736 aa17.94■□□□□ 0.46
CHMP3-202ENST00000393773 MFAP1P55081 439 aaKnown RBP17.94■□□□□ 0.46
CHMP3-202ENST00000393773 ZNF618Q5T7W0 954 aa17.94■□□□□ 0.46
CHMP3-202ENST00000393773 ARHGEF16Q5VV41 709 aa17.94■□□□□ 0.46
CHMP3-202ENST00000393773 IQCA1Q86XH1 822 aa17.94■□□□□ 0.46
CHMP3-202ENST00000393773 FBXO11Q86XK2 927 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms