RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 POTEB3A0JP26 581 aa16.81■□□□□ 0.28
MKS1-202ENST00000393119 SMTNL1A8MU46 457 aa16.81■□□□□ 0.28
MKS1-202ENST00000393119 POTECB2RU33 542 aa16.81■□□□□ 0.28
MKS1-202ENST00000393119 E9PMD0 336 aa16.81■□□□□ 0.28
MKS1-202ENST00000393119 GCOM1H8Y6P7 765 aaPredicted RBP16.81■□□□□ 0.28
MKS1-202ENST00000393119 POLR2MP0CAP2 368 aa16.81■□□□□ 0.28
MKS1-202ENST00000393119 PRCPP42785 496 aa16.81■□□□□ 0.28
MKS1-202ENST00000393119 PMS1P54277 932 aaKnown RBP16.81■□□□□ 0.28
MKS1-202ENST00000393119 CACNB1Q02641 598 aaPredicted RBP16.81■□□□□ 0.28
MKS1-202ENST00000393119 POTEBQ6S5H4 581 aa16.81■□□□□ 0.28
MKS1-202ENST00000393119 INTS13Q9NVM9 706 aa16.81■□□□□ 0.28
MKS1-202ENST00000393119 PKD2L1Q9P0L9 805 aa16.81■□□□□ 0.28
MKS1-202ENST00000393119 NPHP3-ACAD11A0A0J9YXS1 232 aa16.81■□□□□ 0.28
MKS1-202ENST00000393119 MYMKA6NI61 221 aa16.81■□□□□ 0.28
MKS1-202ENST00000393119 MED24O75448 989 aa16.81■□□□□ 0.28
MKS1-202ENST00000393119 ZNF76P36508 570 aa16.81■□□□□ 0.28
MKS1-202ENST00000393119 RAD51AP2Q09MP3 1159 aa16.81■□□□□ 0.28
MKS1-202ENST00000393119 VGLL4Q14135 290 aa16.81■□□□□ 0.28
MKS1-202ENST00000393119 TMEM266Q2M3C6 531 aa16.81■□□□□ 0.28
MKS1-202ENST00000393119 CLMNQ96JQ2 1002 aa16.81■□□□□ 0.28
MKS1-202ENST00000393119 ADARB2Q9NS39 739 aaKnown RBP16.81■□□□□ 0.28
MKS1-202ENST00000393119 CYP3A7-CYP3A51PA0A087WV96 503 aa16.8■□□□□ 0.28
MKS1-202ENST00000393119 ICAM1P05362 532 aa16.8■□□□□ 0.28
MKS1-202ENST00000393119 CYP3A7P24462 503 aa16.8■□□□□ 0.28
MKS1-202ENST00000393119 PSMC6P62333 389 aa16.8■□□□□ 0.28
MKS1-202ENST00000393119 DMTNQ08495 405 aa16.8■□□□□ 0.28
MKS1-202ENST00000393119 SPIRE1Q08AE8 756 aa16.8■□□□□ 0.28
MKS1-202ENST00000393119 NCAPH2Q6IBW4 605 aa16.8■□□□□ 0.28
MKS1-202ENST00000393119 GLIS3Q8NEA6 775 aa16.8■□□□□ 0.28
MKS1-202ENST00000393119 CACTINQ8WUQ7 758 aaKnown RBP16.8■□□□□ 0.28
MKS1-202ENST00000393119 CALML4Q96GE6 196 aa16.8■□□□□ 0.28
MKS1-202ENST00000393119 MBOAT7Q96N66 472 aa16.8■□□□□ 0.28
MKS1-202ENST00000393119 TRIM9Q9C026 710 aa16.8■□□□□ 0.28
MKS1-202ENST00000393119 BCAS3Q9H6U6 928 aa16.8■□□□□ 0.28
MKS1-202ENST00000393119 ABCB11O95342 1321 aa16.8■□□□□ 0.28
MKS1-202ENST00000393119 IGLV3-22A0A075B6J6 115 aa16.8■□□□□ 0.28
MKS1-202ENST00000393119 PIK3CDO00329 1044 aa16.8■□□□□ 0.28
MKS1-202ENST00000393119 EML1O00423 815 aa16.8■□□□□ 0.28
MKS1-202ENST00000393119 SERPINC1P01008 464 aa16.8■□□□□ 0.28
MKS1-202ENST00000393119 POTEIP0CG38 1075 aa16.8■□□□□ 0.28
MKS1-202ENST00000393119 POTEJP0CG39 1038 aa16.8■□□□□ 0.28
MKS1-202ENST00000393119 ZSCAN20P17040 1043 aaPredicted RBP16.8■□□□□ 0.28
MKS1-202ENST00000393119 STK4Q13043 487 aa16.8■□□□□ 0.28
MKS1-202ENST00000393119 CREBRFQ8IUR6 639 aa16.8■□□□□ 0.28
MKS1-202ENST00000393119 TRIML1Q8N9V2 468 aa16.8■□□□□ 0.28
MKS1-202ENST00000393119 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.8■□□□□ 0.28
MKS1-202ENST00000393119 SLC38A10Q9HBR0 1119 aa16.8■□□□□ 0.28
MKS1-202ENST00000393119 PPP1R9AQ9ULJ8 1098 aa16.8■□□□□ 0.28
MKS1-202ENST00000393119 KIAA1024Q9UPX6 916 aa16.8■□□□□ 0.28
MKS1-202ENST00000393119 POTEFA5A3E0 1075 aa16.79■□□□□ 0.28
MKS1-202ENST00000393119 CHMP2AO43633 222 aa16.79■□□□□ 0.28
MKS1-202ENST00000393119 PLA2G6O60733 806 aa16.79■□□□□ 0.28
MKS1-202ENST00000393119 SSBP05455 408 aaKnown RBP eCLIP16.79■□□□□ 0.28
MKS1-202ENST00000393119 ARP10275 920 aa16.79■□□□□ 0.28
MKS1-202ENST00000393119 CCT6AP40227 531 aaKnown RBP16.79■□□□□ 0.28
MKS1-202ENST00000393119 CYP4A11Q02928 519 aa16.79■□□□□ 0.28
MKS1-202ENST00000393119 GPR162Q16538 588 aa16.79■□□□□ 0.28
MKS1-202ENST00000393119 KRT79Q5XKE5 535 aa16.79■□□□□ 0.28
MKS1-202ENST00000393119 POTEGQ6S5H5 508 aa16.79■□□□□ 0.28
MKS1-202ENST00000393119 POTEEQ6S8J3 1075 aa16.79■□□□□ 0.28
MKS1-202ENST00000393119 KRT26Q7Z3Y9 468 aa16.79■□□□□ 0.28
MKS1-202ENST00000393119 ZNF710Q8N1W2 664 aa16.79■□□□□ 0.28
MKS1-202ENST00000393119 LPAR1Q92633 364 aa16.79■□□□□ 0.28
MKS1-202ENST00000393119 MRFAP1L1Q96HT8 127 aa16.79■□□□□ 0.28
MKS1-202ENST00000393119 GLT8D2Q9H1C3 349 aa16.79■□□□□ 0.28
MKS1-202ENST00000393119 MRPL11Q9Y3B7 192 aaKnown RBP16.79■□□□□ 0.28
MKS1-202ENST00000393119 GCFC2P16383 781 aaKnown RBP16.79■□□□□ 0.28
MKS1-202ENST00000393119 ASIC1P78348 528 aa16.79■□□□□ 0.28
MKS1-202ENST00000393119 PDIA5Q14554 519 aa16.79■□□□□ 0.28
MKS1-202ENST00000393119 TMC6Q7Z403 805 aa16.79■□□□□ 0.28
MKS1-202ENST00000393119 ENOX1Q8TC92 643 aaKnown RBP16.79■□□□□ 0.28
MKS1-202ENST00000393119 DCPSQ96C86 337 aaKnown RBP16.79■□□□□ 0.28
MKS1-202ENST00000393119 CDK5RAP3Q96JB5 506 aa16.79■□□□□ 0.28
MKS1-202ENST00000393119 PRIMPOLQ96LW4 560 aa16.79■□□□□ 0.28
MKS1-202ENST00000393119 SNCAIPQ9Y6H5 919 aa16.79■□□□□ 0.28
MKS1-202ENST00000393119 VWA5AO00534 786 aa16.78■□□□□ 0.28
MKS1-202ENST00000393119 ZBTB39O15060 712 aa16.78■□□□□ 0.28
MKS1-202ENST00000393119 ZNF18P17022 549 aa16.78■□□□□ 0.28
MKS1-202ENST00000393119 UBASH3AP57075 661 aa16.78■□□□□ 0.28
MKS1-202ENST00000393119 ORC2Q13416 577 aaPredicted RBP16.78■□□□□ 0.28
MKS1-202ENST00000393119 EAPPQ56P03 285 aaPredicted RBP16.78■□□□□ 0.28
MKS1-202ENST00000393119 TREML2Q5T2D2 321 aa16.78■□□□□ 0.28
MKS1-202ENST00000393119 RGL1Q9NZL6 768 aa16.78■□□□□ 0.28
MKS1-202ENST00000393119 NKRFO15226 690 aaKnown RBP eCLIP16.78■□□□□ 0.28
MKS1-202ENST00000393119 FOSP01100 380 aaPredicted RBP16.78■□□□□ 0.28
MKS1-202ENST00000393119 Q4G0T1 1027 aa16.78■□□□□ 0.28
MKS1-202ENST00000393119 ZNF658Q5TYW1 1059 aaPredicted RBP16.78■□□□□ 0.28
MKS1-202ENST00000393119 SULF1Q8IWU6 871 aa16.78■□□□□ 0.28
MKS1-202ENST00000393119 LARP4BQ92615 738 aaKnown RBP16.78■□□□□ 0.28
MKS1-202ENST00000393119 RAD54LQ92698 747 aa16.78■□□□□ 0.28
MKS1-202ENST00000393119 CCDC34Q96HJ3 373 aa16.78■□□□□ 0.28
MKS1-202ENST00000393119 TAAR1Q96RJ0 339 aa16.78■□□□□ 0.28
MKS1-202ENST00000393119 SLC39A2Q9NP94 309 aa16.78■□□□□ 0.28
MKS1-202ENST00000393119 AFG3L2Q9Y4W6 797 aa16.78■□□□□ 0.28
MKS1-202ENST00000393119 SYNRGQ9UMZ2 1314 aa16.77■□□□□ 0.28
MKS1-202ENST00000393119 DDX39AO00148 427 aaKnown RBP16.77■□□□□ 0.28
MKS1-202ENST00000393119 CDK11BP21127 795 aaKnown RBP16.77■□□□□ 0.28
MKS1-202ENST00000393119 PDE4DQ08499 809 aa16.77■□□□□ 0.28
MKS1-202ENST00000393119 TMEM119Q4V9L6 283 aa16.77■□□□□ 0.28
MKS1-202ENST00000393119 CATSPER3Q86XQ3 398 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms