RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 NSMFQ6X4W1 530 aa15.14■□□□□ 0.01
USP44-202ENST00000393091 SENP7Q9BQF6 1050 aa15.14■□□□□ 0.01
USP44-202ENST00000393091 ABHD16BQ9H3Z7 469 aa15.14■□□□□ 0.01
USP44-202ENST00000393091 GJB4Q9NTQ9 266 aa15.14■□□□□ 0.01
USP44-202ENST00000393091 TMEM260Q9NX78 707 aa15.14■□□□□ 0.01
USP44-202ENST00000393091 LAD1O00515 517 aa15.13■□□□□ 0.01
USP44-202ENST00000393091 RGS20O76081 388 aa15.13■□□□□ 0.01
USP44-202ENST00000393091 HMGCRP04035 888 aa15.13■□□□□ 0.01
USP44-202ENST00000393091 HOXD8P13378 290 aaPredicted RBP15.13■□□□□ 0.01
USP44-202ENST00000393091 STXBP2Q15833 593 aa15.13■□□□□ 0.01
USP44-202ENST00000393091 RILPL1Q5EBL4 403 aa15.13■□□□□ 0.01
USP44-202ENST00000393091 CCDC62Q6P9F0 684 aa15.13■□□□□ 0.01
USP44-202ENST00000393091 ARMCX2Q7L311 632 aa15.13■□□□□ 0.01
USP44-202ENST00000393091 MXRA8Q9BRK3 442 aa15.13■□□□□ 0.01
USP44-202ENST00000393091 UPF3AQ9H1J1 476 aaKnown RBP15.13■□□□□ 0.01
USP44-202ENST00000393091 BIN2Q9UBW5 565 aaPredicted RBP15.13■□□□□ 0.01
USP44-202ENST00000393091 HOXA13P31271 388 aaPredicted RBP15.13■□□□□ 0.01
USP44-202ENST00000393091 EARS2Q5JPH6 523 aaKnown RBP15.13■□□□□ 0.01
USP44-202ENST00000393091 ARHGEF16Q5VV41 709 aa15.13■□□□□ 0.01
USP44-202ENST00000393091 B3GNT9Q6UX72 402 aa15.13■□□□□ 0.01
USP44-202ENST00000393091 NEK8Q86SG6 692 aa15.13■□□□□ 0.01
USP44-202ENST00000393091 CCAR1Q8IX12 1150 aaKnown RBP15.13■□□□□ 0.01
USP44-202ENST00000393091 PIBF1Q8WXW3 757 aa15.13■□□□□ 0.01
USP44-202ENST00000393091 TRIB2Q92519 343 aa15.13■□□□□ 0.01
USP44-202ENST00000393091 CDHR1Q96JP9 859 aa15.13■□□□□ 0.01
USP44-202ENST00000393091 KCNMB3Q9NPA1 279 aa15.13■□□□□ 0.01
USP44-202ENST00000393091 SLC26A4O43511 780 aa15.12■□□□□ 0.01
USP44-202ENST00000393091 DPP9Q86TI2 863 aa15.12■□□□□ 0.01
USP44-202ENST00000393091 C4orf32Q8N8J7 132 aa15.12■□□□□ 0.01
USP44-202ENST00000393091 DOCK5Q9H7D0 1870 aa15.12■□□□□ 0.01
USP44-202ENST00000393091 PGK2P07205 417 aa15.12■□□□□ 0.01
USP44-202ENST00000393091 PRPHP41219 470 aa15.12■□□□□ 0.01
USP44-202ENST00000393091 TOB1P50616 345 aaPredicted RBP15.12■□□□□ 0.01
USP44-202ENST00000393091 IQSEC1Q6DN90 963 aa15.12■□□□□ 0.01
USP44-202ENST00000393091 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.12■□□□□ 0.01
USP44-202ENST00000393091 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.12■□□□□ 0.01
USP44-202ENST00000393091 F13A1P00488 732 aa15.12■□□□□ 0.01
USP44-202ENST00000393091 NR5A1Q13285 461 aa15.12■□□□□ 0.01
USP44-202ENST00000393091 TBCKQ8TEA7 893 aa15.12■□□□□ 0.01
USP44-202ENST00000393091 BMP15O95972 392 aa15.11■□□□□ 0.01
USP44-202ENST00000393091 GIMAP8Q8ND71 665 aaPredicted RBP15.11■□□□□ 0.01
USP44-202ENST00000393091 IL31RAQ8NI17 732 aa15.11■□□□□ 0.01
USP44-202ENST00000393091 ARID2Q68CP9 1835 aa15.11■□□□□ 0.01
USP44-202ENST00000393091 CCDC194A0A1B0GVG4 234 aa15.11■□□□□ 0.01
USP44-202ENST00000393091 H3BQV1 296 aa15.11■□□□□ 0.01
USP44-202ENST00000393091 FIBPO43427 364 aa15.11■□□□□ 0.01
USP44-202ENST00000393091 NASPP49321 788 aaPredicted RBP15.11■□□□□ 0.01
USP44-202ENST00000393091 LBX1P52954 281 aa15.11■□□□□ 0.01
USP44-202ENST00000393091 CEP55Q53EZ4 464 aa15.11■□□□□ 0.01
USP44-202ENST00000393091 IFFO2Q5TF58 517 aa15.11■□□□□ 0.01
USP44-202ENST00000393091 MFSD14CQ5VZR4 134 aa15.11■□□□□ 0.01
USP44-202ENST00000393091 ETNPPLQ8TBG4 499 aa15.11■□□□□ 0.01
USP44-202ENST00000393091 SLC5A5Q92911 643 aa15.11■□□□□ 0.01
USP44-202ENST00000393091 MTMR9Q96QG7 549 aa15.11■□□□□ 0.01
USP44-202ENST00000393091 SEMA3FQ13275 785 aa15.1■□□□□ 0.01
USP44-202ENST00000393091 ADCY3O60266 1144 aa15.1■□□□□ 0.01
USP44-202ENST00000393091 MYSM1Q5VVJ2 828 aa15.1■□□□□ 0.01
USP44-202ENST00000393091 NLRX1Q86UT6 975 aa15.1■□□□□ 0.01
USP44-202ENST00000393091 FAM20AQ96MK3 541 aa15.1■□□□□ 0.01
USP44-202ENST00000393091 POLR3EQ9NVU0 708 aa15.1■□□□□ 0.01
USP44-202ENST00000393091 NOL7Q9UMY1 257 aaKnown RBP15.1■□□□□ 0.01
USP44-202ENST00000393091 ITGB5P18084 799 aa15.1■□□□□ 0.01
USP44-202ENST00000393091 JAKMIP3Q5VZ66 844 aa15.1■□□□□ 0.01
USP44-202ENST00000393091 SAMD1Q6SPF0 538 aaPredicted RBP15.1■□□□□ 0.01
USP44-202ENST00000393091 RIT2Q99578 217 aa15.1■□□□□ 0.01
USP44-202ENST00000393091 GNEQ9Y223 722 aaKnown RBP15.1■□□□□ 0.01
USP44-202ENST00000393091 TCHHQ07283 1943 aa15.09■□□□□ 0.01
USP44-202ENST00000393091 CST5P28325 142 aaPredicted RBP15.09■□□□□ 0.01
USP44-202ENST00000393091 PDE4DQ08499 809 aa15.09■□□□□ 0.01
USP44-202ENST00000393091 ACVR2BQ13705 512 aa15.09■□□□□ 0.01
USP44-202ENST00000393091 PAK6Q9NQU5 681 aaPredicted RBP15.09■□□□□ 0.01
USP44-202ENST00000393091 FAM86B1E9PN63 330 aa15.09■□□□□ 0.01
USP44-202ENST00000393091 FAM86B2P0C5J1 330 aa15.09■□□□□ 0.01
USP44-202ENST00000393091 GNPTABQ3T906 1256 aa15.09■□□□□ 0.01
USP44-202ENST00000393091 ARL6IP4Q66PJ3 421 aaKnown RBP15.09■□□□□ 0.01
USP44-202ENST00000393091 PIK3AP1Q6ZUJ8 805 aa15.09■□□□□ 0.01
USP44-202ENST00000393091 TRPV1Q8NER1 839 aa15.09■□□□□ 0.01
USP44-202ENST00000393091 PURBQ96QR8 312 aaKnown RBP15.09■□□□□ 0.01
USP44-202ENST00000393091 AGO4Q9HCK5 861 aaKnown RBP15.09■□□□□ 0.01
USP44-202ENST00000393091 PTCH2Q9Y6C5 1203 aa15.09■□□□□ 0.01
USP44-202ENST00000393091 MSCO60682 206 aa15.08■□□□□ 0.01
USP44-202ENST00000393091 PPFIA3O75145 1194 aa15.08■□□□□ 0.01
USP44-202ENST00000393091 ATG7O95352 703 aa15.08■□□□□ 0.01
USP44-202ENST00000393091 KCNA2P16389 499 aa15.08■□□□□ 0.01
USP44-202ENST00000393091 GRK4P32298 578 aa15.08■□□□□ 0.01
USP44-202ENST00000393091 CCL14Q16627 93 aa15.08■□□□□ 0.01
USP44-202ENST00000393091 RDM1Q8NG50 284 aa15.08■□□□□ 0.01
USP44-202ENST00000393091 RASGRP4Q8TDF6 673 aa15.08■□□□□ 0.01
USP44-202ENST00000393091 RTEL1Q9NZ71 1219 aa15.08■□□□□ 0.01
USP44-202ENST00000393091 CHMP5Q9NZZ3 219 aa15.08■□□□□ 0.01
USP44-202ENST00000393091 DHX15O43143 795 aaKnown RBP15.08■□□□□ 0
USP44-202ENST00000393091 HSP90AA1P07900 732 aaKnown RBP15.08■□□□□ 0
USP44-202ENST00000393091 KCTD17Q8N5Z5 321 aa15.08■□□□□ 0
USP44-202ENST00000393091 SCFD2Q8WU76 684 aa15.08■□□□□ 0
USP44-202ENST00000393091 DDX41Q9UJV9 622 aaKnown RBP15.08■□□□□ 0
USP44-202ENST00000393091 TRIM17Q9Y577 477 aa15.08■□□□□ 0
USP44-202ENST00000393091 ATP2C1P98194 919 aaPredicted RBP15.08■□□□□ 0
USP44-202ENST00000393091 CACNB2Q08289 660 aaPredicted RBP15.08■□□□□ 0
USP44-202ENST00000393091 PTPAQ15257 358 aa15.08■□□□□ 0
USP44-202ENST00000393091 DUSP28Q4G0W2 176 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms