RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 TMEM60Q9H2L4 133 aa12.05□□□□□ -0.48
BRF1-204ENST00000392557 LRWD1Q9UFC0 647 aa12.05□□□□□ -0.48
BRF1-204ENST00000392557 PCDHA6Q9UN73 950 aa12.05□□□□□ -0.48
BRF1-204ENST00000392557 PCDHA8Q9Y5H6 950 aa12.05□□□□□ -0.48
BRF1-204ENST00000392557 GAKO14976 1311 aa12.05□□□□□ -0.48
BRF1-204ENST00000392557 PALM3A6NDB9 673 aaPredicted RBP12.04□□□□□ -0.48
BRF1-204ENST00000392557 H0YHG0 523 aa12.04□□□□□ -0.48
BRF1-204ENST00000392557 STXBP3O00186 592 aa12.04□□□□□ -0.48
BRF1-204ENST00000392557 ZEB2O60315 1214 aa12.04□□□□□ -0.48
BRF1-204ENST00000392557 CRKP46108 304 aa12.04□□□□□ -0.48
BRF1-204ENST00000392557 ARID5AQ03989 594 aa12.04□□□□□ -0.48
BRF1-204ENST00000392557 CACNA2D4Q7Z3S7 1137 aa12.04□□□□□ -0.48
BRF1-204ENST00000392557 SH3RF1Q7Z6J0 888 aa12.04□□□□□ -0.48
BRF1-204ENST00000392557 HPS3Q969F9 1004 aa12.04□□□□□ -0.48
BRF1-204ENST00000392557 CDK5RAP3Q96JB5 506 aa12.04□□□□□ -0.48
BRF1-204ENST00000392557 LACRTQ9GZZ8 138 aa12.04□□□□□ -0.48
BRF1-204ENST00000392557 TMEM260Q9NX78 707 aa12.04□□□□□ -0.48
BRF1-204ENST00000392557 BARHL2Q9NY43 387 aa12.04□□□□□ -0.48
BRF1-204ENST00000392557 PSD3Q9NYI0 1048 aa12.04□□□□□ -0.48
BRF1-204ENST00000392557 SMARCAL1Q9NZC9 954 aa12.04□□□□□ -0.48
BRF1-204ENST00000392557 TACC1O75410 805 aa12.04□□□□□ -0.48
BRF1-204ENST00000392557 GTF2A1P52655 376 aaPredicted RBP12.04□□□□□ -0.48
BRF1-204ENST00000392557 IKQ13123 557 aaPredicted RBP12.04□□□□□ -0.48
BRF1-204ENST00000392557 EZH2Q15910 746 aaKnown RBP12.04□□□□□ -0.48
BRF1-204ENST00000392557 IL17AQ16552 155 aa12.04□□□□□ -0.48
BRF1-204ENST00000392557 CT47A1Q5JQC4 288 aaPredicted RBP12.04□□□□□ -0.48
BRF1-204ENST00000392557 IFT81Q8WYA0 676 aa12.04□□□□□ -0.48
BRF1-204ENST00000392557 FAM107BQ9H098 131 aa12.04□□□□□ -0.48
BRF1-204ENST00000392557 KLRG2A4D1S0 409 aaPredicted RBP12.04□□□□□ -0.48
BRF1-204ENST00000392557 PLSCR1O15162 318 aa12.04□□□□□ -0.48
BRF1-204ENST00000392557 TTBK2Q6IQ55 1244 aa12.04□□□□□ -0.48
BRF1-204ENST00000392557 MTRQ99707 1265 aa12.04□□□□□ -0.48
BRF1-204ENST00000392557 SELENOOQ9BVL4 669 aa12.04□□□□□ -0.48
BRF1-204ENST00000392557 C6orf50Q9HD87 102 aa12.04□□□□□ -0.48
BRF1-204ENST00000392557 DISC1Q9NRI5 854 aa12.04□□□□□ -0.48
BRF1-204ENST00000392557 ITIH6Q6UXX5 1313 aa12.04□□□□□ -0.48
BRF1-204ENST00000392557 SNED1Q8TER0 1413 aa12.03□□□□□ -0.48
BRF1-204ENST00000392557 LGALS16A8MUM7 142 aa12.03□□□□□ -0.48
BRF1-204ENST00000392557 ECE2O60344 883 aa12.03□□□□□ -0.48
BRF1-204ENST00000392557 PAFAH1B1P43034 410 aa12.03□□□□□ -0.48
BRF1-204ENST00000392557 DNM2P50570 870 aa12.03□□□□□ -0.48
BRF1-204ENST00000392557 KCTD16Q68DU8 428 aa12.03□□□□□ -0.48
BRF1-204ENST00000392557 LRRC31Q6UY01 552 aa12.03□□□□□ -0.48
BRF1-204ENST00000392557 FAM163AQ96GL9 167 aaPredicted RBP12.03□□□□□ -0.48
BRF1-204ENST00000392557 CNOT6LQ96LI5 555 aaKnown RBP12.03□□□□□ -0.48
BRF1-204ENST00000392557 IFIH1Q9BYX4 1025 aaKnown RBP12.03□□□□□ -0.48
BRF1-204ENST00000392557 PDGFDQ9GZP0 370 aaPredicted RBP12.03□□□□□ -0.48
BRF1-204ENST00000392557 SLC39A2Q9NP94 309 aa12.03□□□□□ -0.48
BRF1-204ENST00000392557 MTMR4Q9NYA4 1195 aa12.03□□□□□ -0.48
BRF1-204ENST00000392557 ROBO3Q96MS0 1386 aa12.03□□□□□ -0.48
BRF1-204ENST00000392557 KIAA1551Q9HCM1 1747 aa12.03□□□□□ -0.48
BRF1-204ENST00000392557 SHTN1A0MZ66 631 aa12.03□□□□□ -0.48
BRF1-204ENST00000392557 C21orf2O43822 256 aa12.03□□□□□ -0.48
BRF1-204ENST00000392557 LIG3P49916 1009 aa12.03□□□□□ -0.48
BRF1-204ENST00000392557 DYMQ7RTS9 669 aa12.03□□□□□ -0.48
BRF1-204ENST00000392557 TRMT1LQ7Z2T5 733 aaKnown RBP12.03□□□□□ -0.48
BRF1-204ENST00000392557 FLAD1Q8NFF5 587 aa12.03□□□□□ -0.48
BRF1-204ENST00000392557 REXO2Q9Y3B8 237 aaKnown RBP12.03□□□□□ -0.48
BRF1-204ENST00000392557 BUB1O43683 1085 aa12.03□□□□□ -0.48
BRF1-204ENST00000392557 GDF11O95390 407 aa12.03□□□□□ -0.48
BRF1-204ENST00000392557 TNNI2P48788 182 aa12.03□□□□□ -0.48
BRF1-204ENST00000392557 PDXDC2PQ6P474 469 aa12.03□□□□□ -0.48
BRF1-204ENST00000392557 LAMB1P07942 1786 aa12.02□□□□□ -0.48
BRF1-204ENST00000392557 EBAG9O00559 213 aa12.02□□□□□ -0.48
BRF1-204ENST00000392557 MOCS3O95396 460 aa12.02□□□□□ -0.48
BRF1-204ENST00000392557 PLEKP08567 350 aaPredicted RBP12.02□□□□□ -0.48
BRF1-204ENST00000392557 PDHBP11177 359 aa12.02□□□□□ -0.48
BRF1-204ENST00000392557 LONP1P36776 959 aaKnown RBP12.02□□□□□ -0.48
BRF1-204ENST00000392557 ATP1A2P50993 1020 aa12.02□□□□□ -0.48
BRF1-204ENST00000392557 HERVK_113P62684 666 aa12.02□□□□□ -0.48
BRF1-204ENST00000392557 APOBEC3HQ6NTF7 200 aaKnown RBP12.02□□□□□ -0.48
BRF1-204ENST00000392557 BCAS4Q8TDM0 211 aa12.02□□□□□ -0.48
BRF1-204ENST00000392557 COG1Q8WTW3 980 aa12.02□□□□□ -0.48
BRF1-204ENST00000392557 ANKS1AQ92625 1134 aa12.02□□□□□ -0.48
BRF1-204ENST00000392557 MLXIPQ9HAP2 919 aa12.02□□□□□ -0.48
BRF1-204ENST00000392557 HPCAL4Q9UM19 191 aa12.02□□□□□ -0.48
BRF1-204ENST00000392557 SAMM50Q9Y512 469 aa12.02□□□□□ -0.48
BRF1-204ENST00000392557 NAV1Q8NEY1 1877 aa12.02□□□□□ -0.49
BRF1-204ENST00000392557 TECP42680 631 aa12.02□□□□□ -0.49
BRF1-204ENST00000392557 TRAPPC10P48553 1259 aa12.02□□□□□ -0.49
BRF1-204ENST00000392557 RRAGAQ7L523 313 aa12.02□□□□□ -0.49
BRF1-204ENST00000392557 TRAPPC11Q7Z392 1133 aa12.02□□□□□ -0.49
BRF1-204ENST00000392557 REXO1Q8N1G1 1221 aaKnown RBP12.02□□□□□ -0.49
BRF1-204ENST00000392557 ALS2CR12Q96Q35 445 aa12.02□□□□□ -0.49
BRF1-204ENST00000392557 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.02□□□□□ -0.49
BRF1-204ENST00000392557 ZHX3Q9H4I2 956 aa12.02□□□□□ -0.49
BRF1-204ENST00000392557 TDRD3Q9H7E2 651 aaKnown RBP12.02□□□□□ -0.49
BRF1-204ENST00000392557 EHD2Q9NZN4 543 aa12.02□□□□□ -0.49
BRF1-204ENST00000392557 MAST2Q6P0Q8 1798 aa12.02□□□□□ -0.49
BRF1-204ENST00000392557 PPIP5K2O43314 1243 aa12.02□□□□□ -0.49
BRF1-204ENST00000392557 IBSPP21815 317 aaPredicted RBP12.02□□□□□ -0.49
BRF1-204ENST00000392557 EEF1GP26641 437 aaKnown RBP12.02□□□□□ -0.49
BRF1-204ENST00000392557 GNA11P29992 359 aa12.02□□□□□ -0.49
BRF1-204ENST00000392557 TXKP42681 527 aa12.02□□□□□ -0.49
BRF1-204ENST00000392557 NONOQ15233 471 aaKnown RBP eCLIP12.02□□□□□ -0.49
BRF1-204ENST00000392557 UBE2SQ16763 222 aa12.02□□□□□ -0.49
BRF1-204ENST00000392557 PTPROQ16827 1216 aa12.02□□□□□ -0.49
BRF1-204ENST00000392557 CABP7Q86V35 215 aa12.02□□□□□ -0.49
BRF1-204ENST00000392557 ADSSL1Q8N142 457 aa12.02□□□□□ -0.49
BRF1-204ENST00000392557 TBCKQ8TEA7 893 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms