RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 IL31RAQ8NI17 732 aa13.64□□□□□ -0.23
RFC4-202ENST00000392481 SMARCC2Q8TAQ2 1214 aa13.64□□□□□ -0.23
RFC4-202ENST00000392481 SEZ6LQ9BYH1 1024 aa13.64□□□□□ -0.23
RFC4-202ENST00000392481 PDLIM7Q9NR12 457 aa13.64□□□□□ -0.23
RFC4-202ENST00000392481 POLR3EQ9NVU0 708 aa13.64□□□□□ -0.23
RFC4-202ENST00000392481 V9GY48 417 aaPredicted RBP13.64□□□□□ -0.23
RFC4-202ENST00000392481 NID2Q14112 1375 aa13.63□□□□□ -0.23
RFC4-202ENST00000392481 MROH7Q68CQ1 1323 aa13.63□□□□□ -0.23
RFC4-202ENST00000392481 A0A1W2PPC1 479 aa13.63□□□□□ -0.23
RFC4-202ENST00000392481 A6NJR5 290 aa13.63□□□□□ -0.23
RFC4-202ENST00000392481 DCDC2CA8MYV0 355 aa13.63□□□□□ -0.23
RFC4-202ENST00000392481 KPNA6O60684 536 aa13.63□□□□□ -0.23
RFC4-202ENST00000392481 CLTBP09497 229 aa13.63□□□□□ -0.23
RFC4-202ENST00000392481 MYCLP12524 364 aaPredicted RBP13.63□□□□□ -0.23
RFC4-202ENST00000392481 CDC27P30260 824 aa13.63□□□□□ -0.23
RFC4-202ENST00000392481 ADD1P35611 737 aaKnown RBP13.63□□□□□ -0.23
RFC4-202ENST00000392481 KCNV1Q6PIU1 500 aa13.63□□□□□ -0.23
RFC4-202ENST00000392481 USP17L6PQ6QN14 398 aa13.63□□□□□ -0.23
RFC4-202ENST00000392481 TEX2Q8IWB9 1127 aa13.63□□□□□ -0.23
RFC4-202ENST00000392481 COPS5Q92905 334 aa13.63□□□□□ -0.23
RFC4-202ENST00000392481 LBHD1Q9BQE6 289 aaPredicted RBP13.63□□□□□ -0.23
RFC4-202ENST00000392481 DDX41Q9UJV9 622 aaKnown RBP13.63□□□□□ -0.23
RFC4-202ENST00000392481 hCG_1984214I3L0E3 225 aa13.62□□□□□ -0.23
RFC4-202ENST00000392481 STAM2O75886 525 aa13.62□□□□□ -0.23
RFC4-202ENST00000392481 RGS20O76081 388 aa13.62□□□□□ -0.23
RFC4-202ENST00000392481 GH1P01241 217 aa13.62□□□□□ -0.23
RFC4-202ENST00000392481 ANAPC15P60006 121 aa13.62□□□□□ -0.23
RFC4-202ENST00000392481 ARHGAP1Q07960 439 aa13.62□□□□□ -0.23
RFC4-202ENST00000392481 LY6KQ17RY6 165 aa13.62□□□□□ -0.23
RFC4-202ENST00000392481 WWC2Q6AWC2 1192 aa13.62□□□□□ -0.23
RFC4-202ENST00000392481 PPP1R18Q6NYC8 613 aa13.62□□□□□ -0.23
RFC4-202ENST00000392481 XRRA1Q6P2D8 792 aa13.62□□□□□ -0.23
RFC4-202ENST00000392481 ZNF713Q8N859 430 aaPredicted RBP13.62□□□□□ -0.23
RFC4-202ENST00000392481 SLC43A3Q8NBI5 491 aa13.62□□□□□ -0.23
RFC4-202ENST00000392481 GPKOWQ92917 476 aaPredicted RBP eCLIP13.62□□□□□ -0.237e-6■■■■■ 33.4
RFC4-202ENST00000392481 PRDM5Q9NQX1 630 aaPredicted RBP13.62□□□□□ -0.23
RFC4-202ENST00000392481 MRVI1Q9Y6F6 885 aa13.62□□□□□ -0.23
RFC4-202ENST00000392481 LAMA3Q16787 3333 aa13.61□□□□□ -0.23
RFC4-202ENST00000392481 TRIM43BA6NCK2 446 aa13.61□□□□□ -0.23
RFC4-202ENST00000392481 KIAA0355O15063 1070 aa13.61□□□□□ -0.23
RFC4-202ENST00000392481 TGFB3P10600 412 aa13.61□□□□□ -0.23
RFC4-202ENST00000392481 PURAQ00577 322 aaKnown RBP13.61□□□□□ -0.23
RFC4-202ENST00000392481 MDM2Q00987 491 aaPredicted RBP13.61□□□□□ -0.23
RFC4-202ENST00000392481 FAAP100Q0VG06 881 aa13.61□□□□□ -0.23
RFC4-202ENST00000392481 ITGA7Q13683 1181 aa13.61□□□□□ -0.23
RFC4-202ENST00000392481 TOB2Q14106 344 aaPredicted RBP13.61□□□□□ -0.23
RFC4-202ENST00000392481 SH3RF1Q7Z6J0 888 aa13.61□□□□□ -0.23
RFC4-202ENST00000392481 EMID1Q96A84 441 aaPredicted RBP13.61□□□□□ -0.23
RFC4-202ENST00000392481 TRIM43Q96BQ3 446 aaPredicted RBP13.61□□□□□ -0.23
RFC4-202ENST00000392481 MTG1Q9BT17 334 aaPredicted RBP13.61□□□□□ -0.23
RFC4-202ENST00000392481 UPF3BQ9BZI7 483 aaKnown RBP13.61□□□□□ -0.23
RFC4-202ENST00000392481 TMEM39AQ9NV64 488 aa13.61□□□□□ -0.23
RFC4-202ENST00000392481 GRIN2DO15399 1336 aa13.6□□□□□ -0.23
RFC4-202ENST00000392481 MYL3P08590 195 aa13.6□□□□□ -0.23
RFC4-202ENST00000392481 PDIA3P30101 505 aaKnown RBP13.6□□□□□ -0.23
RFC4-202ENST00000392481 NAPAP54920 295 aa13.6□□□□□ -0.23
RFC4-202ENST00000392481 MRPS9P82933 396 aaKnown RBP13.6□□□□□ -0.23
RFC4-202ENST00000392481 LAMC2Q13753 1193 aa13.6□□□□□ -0.23
RFC4-202ENST00000392481 GNPTABQ3T906 1256 aa13.6□□□□□ -0.23
RFC4-202ENST00000392481 PCNX4Q63HM2 1172 aa13.6□□□□□ -0.23
RFC4-202ENST00000392481 FAM126BQ8IXS8 530 aa13.6□□□□□ -0.23
RFC4-202ENST00000392481 AFG1LQ8WV93 481 aa13.6□□□□□ -0.23
RFC4-202ENST00000392481 INPP4AQ96PE3 977 aaPredicted RBP13.6□□□□□ -0.23
RFC4-202ENST00000392481 UBE2OQ9C0C9 1292 aaKnown RBP13.6□□□□□ -0.23
RFC4-202ENST00000392481 BARHL2Q9NY43 387 aa13.6□□□□□ -0.23
RFC4-202ENST00000392481 SCN10AQ9Y5Y9 1956 aa13.6□□□□□ -0.23
RFC4-202ENST00000392481 LTBP2Q14767 1821 aa13.6□□□□□ -0.23
RFC4-202ENST00000392481 STXBP3O00186 592 aa13.59□□□□□ -0.23
RFC4-202ENST00000392481 TLR3O15455 904 aaKnown RBP13.59□□□□□ -0.23
RFC4-202ENST00000392481 NTRK3Q16288 839 aa13.59□□□□□ -0.23
RFC4-202ENST00000392481 UBE2SQ16763 222 aa13.59□□□□□ -0.23
RFC4-202ENST00000392481 PFKFB3Q16875 520 aaPredicted RBP13.59□□□□□ -0.23
RFC4-202ENST00000392481 TYW1BQ6NUM6 668 aa13.59□□□□□ -0.23
RFC4-202ENST00000392481 DHX37Q8IY37 1157 aaKnown RBP13.59□□□□□ -0.23
RFC4-202ENST00000392481 ZNF274Q96GC6 653 aaPredicted RBP13.59□□□□□ -0.23
RFC4-202ENST00000392481 GLT8D2Q9H1C3 349 aa13.59□□□□□ -0.23
RFC4-202ENST00000392481 RIC8AQ9NPQ8 531 aa13.59□□□□□ -0.23
RFC4-202ENST00000392481 PDRG1Q9NUG6 133 aa13.59□□□□□ -0.23
RFC4-202ENST00000392481 PCDH10Q9P2E7 1040 aa13.59□□□□□ -0.23
RFC4-202ENST00000392481 TBX21Q9UL17 535 aa13.59□□□□□ -0.23
RFC4-202ENST00000392481 MYH7BA7E2Y1 1941 aa13.59□□□□□ -0.23
RFC4-202ENST00000392481 LAMA2P24043 3122 aaKnown RBP13.58□□□□□ -0.23
RFC4-202ENST00000392481 SPDYE3A6NKU9 549 aa13.58□□□□□ -0.24
RFC4-202ENST00000392481 PRPF3O43395 683 aaKnown RBP13.58□□□□□ -0.24
RFC4-202ENST00000392481 CD4P01730 458 aa13.58□□□□□ -0.24
RFC4-202ENST00000392481 MMP3P08254 477 aa13.58□□□□□ -0.24
RFC4-202ENST00000392481 SCG2P13521 617 aa13.58□□□□□ -0.24
RFC4-202ENST00000392481 RAG1P15918 1043 aa13.58□□□□□ -0.24
RFC4-202ENST00000392481 IFNAR1P17181 557 aa13.58□□□□□ -0.24
RFC4-202ENST00000392481 ICAM3P32942 547 aa13.58□□□□□ -0.24
RFC4-202ENST00000392481 ADCY7P51828 1080 aa13.58□□□□□ -0.24
RFC4-202ENST00000392481 PSMC6P62333 389 aa13.58□□□□□ -0.24
RFC4-202ENST00000392481 DGKDQ16760 1214 aa13.58□□□□□ -0.24
RFC4-202ENST00000392481 CELF3Q5SZQ8 465 aaKnown RBP13.58□□□□□ -0.24
RFC4-202ENST00000392481 MYSM1Q5VVJ2 828 aa13.58□□□□□ -0.24
RFC4-202ENST00000392481 PPTC7Q8NI37 304 aa13.58□□□□□ -0.24
RFC4-202ENST00000392481 BADQ92934 168 aa13.58□□□□□ -0.24
RFC4-202ENST00000392481 IL17RAQ96F46 866 aa13.58□□□□□ -0.24
RFC4-202ENST00000392481 ZFP91Q96JP5 570 aaPredicted RBP13.58□□□□□ -0.24
RFC4-202ENST00000392481 SMCO2A6NFE2 343 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms