RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 TRIM49BA6NDI0 452 aa18.2■□□□□ 0.5
SNX9-201ENST00000392185 POTECB2RU33 542 aa18.2■□□□□ 0.5
SNX9-201ENST00000392185 SPOPO43791 374 aa18.2■□□□□ 0.5
SNX9-201ENST00000392185 U2AF2P26368 475 aaKnown RBP eCLIP18.2■□□□□ 0.53e-9■■□□□ 14.3
SNX9-201ENST00000392185 POTEBQ6S5H4 581 aa18.2■□□□□ 0.5
SNX9-201ENST00000392185 DDX12PQ92771 950 aa18.2■□□□□ 0.5
SNX9-201ENST00000392185 SECISBP2LQ93073 1101 aaKnown RBP18.2■□□□□ 0.5
SNX9-201ENST00000392185 DHTKD1Q96HY7 919 aaPredicted RBP18.2■□□□□ 0.5
SNX9-201ENST00000392185 PCIF1Q9H4Z3 704 aa18.2■□□□□ 0.5
SNX9-201ENST00000392185 PDHBP11177 359 aa18.2■□□□□ 0.5
SNX9-201ENST00000392185 STAT3P40763 770 aa18.2■□□□□ 0.5
SNX9-201ENST00000392185 IREB2P48200 963 aaKnown RBP18.2■□□□□ 0.5
SNX9-201ENST00000392185 EMILIN3Q9NT22 766 aa18.2■□□□□ 0.5
SNX9-201ENST00000392185 CCNE1P24864 410 aa18.2■□□□□ 0.5
SNX9-201ENST00000392185 SMC1AQ14683 1233 aaKnown RBP18.2■□□□□ 0.5
SNX9-201ENST00000392185 STYK1Q6J9G0 422 aa18.2■□□□□ 0.5
SNX9-201ENST00000392185 NACC1Q96RE7 527 aa18.2■□□□□ 0.5
SNX9-201ENST00000392185 PNMA2Q9UL42 364 aa18.2■□□□□ 0.5
SNX9-201ENST00000392185 TCRBV5S4A2TA0A5A2 114 aa18.19■□□□□ 0.5
SNX9-201ENST00000392185 PRPF6O94906 941 aaKnown RBP18.19■□□□□ 0.5
SNX9-201ENST00000392185 COL9A3Q14050 684 aaPredicted RBP18.19■□□□□ 0.5
SNX9-201ENST00000392185 SNRNP48Q6IEG0 339 aaKnown RBP18.19■□□□□ 0.5
SNX9-201ENST00000392185 SLC10A4Q96EP9 437 aa18.19■□□□□ 0.5
SNX9-201ENST00000392185 SPZ1Q9BXG8 430 aa18.19■□□□□ 0.5
SNX9-201ENST00000392185 SPON1Q9HCB6 807 aa18.19■□□□□ 0.5
SNX9-201ENST00000392185 PPP2R2CQ9Y2T4 447 aa18.19■□□□□ 0.5
SNX9-201ENST00000392185 HNRNPDLO14979 420 aaKnown RBP18.19■□□□□ 0.5
SNX9-201ENST00000392185 GNA14O95837 355 aa18.19■□□□□ 0.5
SNX9-201ENST00000392185 HMGCS2P54868 508 aa18.19■□□□□ 0.5
SNX9-201ENST00000392185 FAM47CQ5HY64 1035 aa18.19■□□□□ 0.5
SNX9-201ENST00000392185 HOOK3Q86VS8 718 aa18.19■□□□□ 0.5
SNX9-201ENST00000392185 ZNF579Q8NAF0 562 aaKnown RBP18.19■□□□□ 0.5
SNX9-201ENST00000392185 PHF20Q9BVI0 1012 aa18.19■□□□□ 0.5
SNX9-201ENST00000392185 CTTNBP2NLQ9P2B4 639 aa18.19■□□□□ 0.5
SNX9-201ENST00000392185 ANKFY1Q9P2R3 1169 aa18.19■□□□□ 0.5
SNX9-201ENST00000392185 NFAT5O94916 1531 aa18.19■□□□□ 0.5
SNX9-201ENST00000392185 STAT1P42224 750 aa18.19■□□□□ 0.5
SNX9-201ENST00000392185 GRIPAP1Q4V328 841 aa18.19■□□□□ 0.5
SNX9-201ENST00000392185 PPM1KQ8N3J5 372 aa18.19■□□□□ 0.5
SNX9-201ENST00000392185 PRPF38AQ8NAV1 312 aaKnown RBP18.19■□□□□ 0.5
SNX9-201ENST00000392185 POMGNT1Q8WZA1 660 aa18.19■□□□□ 0.5
SNX9-201ENST00000392185 IWS1Q96ST2 819 aa18.19■□□□□ 0.5
SNX9-201ENST00000392185 PLEKHA4Q9H4M7 779 aa18.19■□□□□ 0.5
SNX9-201ENST00000392185 NRXN3Q9Y4C0 1643 aa18.18■□□□□ 0.5
SNX9-201ENST00000392185 GRIN1Q05586 938 aa18.18■□□□□ 0.5
SNX9-201ENST00000392185 ATP6V0A1Q93050 837 aa18.18■□□□□ 0.5
SNX9-201ENST00000392185 RNF146Q9NTX7 359 aa18.18■□□□□ 0.5
SNX9-201ENST00000392185 CNGA1P29973 690 aa18.18■□□□□ 0.5
SNX9-201ENST00000392185 DMP1Q13316 513 aaPredicted RBP18.18■□□□□ 0.5
SNX9-201ENST00000392185 AP3B2Q13367 1082 aa18.18■□□□□ 0.5
SNX9-201ENST00000392185 ELF2Q15723 593 aa18.18■□□□□ 0.5
SNX9-201ENST00000392185 MTERF2Q49AM1 385 aa18.18■□□□□ 0.5
SNX9-201ENST00000392185 U2AF1L4Q8WU68 220 aaKnown RBP18.18■□□□□ 0.5
SNX9-201ENST00000392185 OTUD5Q96G74 571 aa18.18■□□□□ 0.5
SNX9-201ENST00000392185 FBXO2Q9UK22 296 aaPredicted RBP18.18■□□□□ 0.5
SNX9-201ENST00000392185 RGPD8O14715 1765 aaPredicted RBP18.18■□□□□ 0.5
SNX9-201ENST00000392185 RBL2Q08999 1139 aa18.18■□□□□ 0.5
SNX9-201ENST00000392185 ARMC9Q7Z3E5 817 aa18.18■□□□□ 0.5
SNX9-201ENST00000392185 DYDC1Q8WWB3 177 aa18.18■□□□□ 0.5
SNX9-201ENST00000392185 EPN1Q9Y6I3 576 aaPredicted RBP18.18■□□□□ 0.5
SNX9-201ENST00000392185 KIF1AQ12756 1690 aa18.17■□□□□ 0.5
SNX9-201ENST00000392185 POTEFA5A3E0 1075 aa18.17■□□□□ 0.5
SNX9-201ENST00000392185 POTEIP0CG38 1075 aa18.17■□□□□ 0.5
SNX9-201ENST00000392185 PRPHP41219 470 aa18.17■□□□□ 0.5
SNX9-201ENST00000392185 ETF1P62495 437 aaKnown RBP18.17■□□□□ 0.5
SNX9-201ENST00000392185 ATP2C1P98194 919 aaPredicted RBP18.17■□□□□ 0.5
SNX9-201ENST00000392185 POTEGQ6S5H5 508 aa18.17■□□□□ 0.5
SNX9-201ENST00000392185 POTEEQ6S8J3 1075 aa18.17■□□□□ 0.5
SNX9-201ENST00000392185 GBP6Q6ZN66 633 aa18.17■□□□□ 0.5
SNX9-201ENST00000392185 NOX5Q96PH1 765 aa18.17■□□□□ 0.5
SNX9-201ENST00000392185 MYO1AQ9UBC5 1043 aa18.17■□□□□ 0.5
SNX9-201ENST00000392185 ANAPC4Q9UJX5 808 aa18.17■□□□□ 0.5
SNX9-201ENST00000392185 CNTNAP5Q8WYK1 1306 aa18.17■□□□□ 0.5
SNX9-201ENST00000392185 ACTN2P35609 894 aa18.17■□□□□ 0.5
SNX9-201ENST00000392185 BCRP11274 1271 aa18.17■□□□□ 0.5
SNX9-201ENST00000392185 GMPSP49915 693 aaPredicted RBP18.17■□□□□ 0.5
SNX9-201ENST00000392185 KIFAP3Q92845 792 aa18.17■□□□□ 0.5
SNX9-201ENST00000392185 RTFDC1Q9BY42 306 aaPredicted RBP18.17■□□□□ 0.5
SNX9-201ENST00000392185 TSGA10Q9BZW7 698 aa18.17■□□□□ 0.5
SNX9-201ENST00000392185 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.17■□□□□ 0.5
SNX9-201ENST00000392185 CWC15Q9P013 229 aaKnown RBP18.17■□□□□ 0.5
SNX9-201ENST00000392185 ABCB11O95342 1321 aa18.17■□□□□ 0.5
SNX9-201ENST00000392185 STX10O60499 249 aa18.16■□□□□ 0.5
SNX9-201ENST00000392185 EXOC3L4Q17RC7 722 aa18.16■□□□□ 0.5
SNX9-201ENST00000392185 LDHDQ86WU2 507 aa18.16■□□□□ 0.5
SNX9-201ENST00000392185 SLC7A3Q8WY07 619 aa18.16■□□□□ 0.5
SNX9-201ENST00000392185 ERO1AQ96HE7 468 aa18.16■□□□□ 0.5
SNX9-201ENST00000392185 MON2Q7Z3U7 1717 aa18.16■□□□□ 0.5
SNX9-201ENST00000392185 GRIK5Q16478 980 aa18.16■□□□□ 0.5
SNX9-201ENST00000392185 ANGEL2Q5VTE6 544 aaKnown RBP18.16■□□□□ 0.5
SNX9-201ENST00000392185 CCDC51Q96ER9 411 aa18.16■□□□□ 0.5
SNX9-201ENST00000392185 SH2D3AQ9BRG2 576 aa18.16■□□□□ 0.5
SNX9-201ENST00000392185 KCNQ5Q9NR82 932 aa18.16■□□□□ 0.5
SNX9-201ENST00000392185 ADD3Q9UEY8 706 aaKnown RBP18.16■□□□□ 0.5
SNX9-201ENST00000392185 FMN2Q9NZ56 1722 aa18.16■□□□□ 0.5
SNX9-201ENST00000392185 EEF1GP26641 437 aaKnown RBP18.16■□□□□ 0.5
SNX9-201ENST00000392185 DDIT3P35638 169 aa18.16■□□□□ 0.5
SNX9-201ENST00000392185 PRCPP42785 496 aa18.16■□□□□ 0.5
SNX9-201ENST00000392185 METTL16Q86W50 562 aaKnown RBP18.16■□□□□ 0.5
SNX9-201ENST00000392185 ZNF500O60304 480 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms