RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 CEP95Q96GE4 821 aa23.27■■□□□ 1.31
COL23A1-201ENST00000390654 PURBQ96QR8 312 aaKnown RBP23.27■■□□□ 1.31
COL23A1-201ENST00000390654 FAM184BQ9ULE4 1060 aa23.27■■□□□ 1.31
COL23A1-201ENST00000390654 SIK3Q9Y2K2 1263 aa23.27■■□□□ 1.31
COL23A1-201ENST00000390654 ANO9A1A5B4 782 aa23.26■■□□□ 1.31
COL23A1-201ENST00000390654 TNNI2P48788 182 aa23.26■■□□□ 1.31
COL23A1-201ENST00000390654 ATP1A2P50993 1020 aa23.26■■□□□ 1.31
COL23A1-201ENST00000390654 CALCRLQ16602 461 aa23.26■■□□□ 1.31
COL23A1-201ENST00000390654 KRT25Q7Z3Z0 450 aa23.26■■□□□ 1.31
COL23A1-201ENST00000390654 REXO1Q8N1G1 1221 aaKnown RBP23.26■■□□□ 1.31
COL23A1-201ENST00000390654 LRRC47Q8N1G4 583 aaKnown RBP23.26■■□□□ 1.31
COL23A1-201ENST00000390654 SAMM50Q9Y512 469 aa23.26■■□□□ 1.31
COL23A1-201ENST00000390654 CERS3Q8IU89 383 aa23.26■■□□□ 1.31
COL23A1-201ENST00000390654 SNX29Q8TEQ0 813 aa23.26■■□□□ 1.31
COL23A1-201ENST00000390654 RPGRIP1Q96KN7 1286 aa23.26■■□□□ 1.31
COL23A1-201ENST00000390654 ANKRD2Q9GZV1 360 aa23.26■■□□□ 1.31
COL23A1-201ENST00000390654 CDK8P49336 464 aa23.25■■□□□ 1.31
COL23A1-201ENST00000390654 UBE2SQ16763 222 aa23.25■■□□□ 1.31
COL23A1-201ENST00000390654 PACS2Q86VP3 889 aa23.25■■□□□ 1.31
COL23A1-201ENST00000390654 PNMA5Q96PV4 448 aa23.25■■□□□ 1.31
COL23A1-201ENST00000390654 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.25■■□□□ 1.31
COL23A1-201ENST00000390654 ZHX3Q9H4I2 956 aa23.25■■□□□ 1.31
COL23A1-201ENST00000390654 GPCPD1Q9NPB8 672 aa23.25■■□□□ 1.31
COL23A1-201ENST00000390654 RTCBQ9Y3I0 505 aaKnown RBP23.25■■□□□ 1.31
COL23A1-201ENST00000390654 MYL1P05976 194 aa23.25■■□□□ 1.31
COL23A1-201ENST00000390654 PRPHP41219 470 aa23.25■■□□□ 1.31
COL23A1-201ENST00000390654 ZSCAN29Q8IWY8 852 aaPredicted RBP23.25■■□□□ 1.31
COL23A1-201ENST00000390654 LARP4BQ92615 738 aaKnown RBP23.25■■□□□ 1.31
COL23A1-201ENST00000390654 PPFIA4O75335 1185 aa23.24■■□□□ 1.31
COL23A1-201ENST00000390654 BTDP43251 543 aa23.24■■□□□ 1.31
COL23A1-201ENST00000390654 GUCY2FP51841 1108 aa23.24■■□□□ 1.31
COL23A1-201ENST00000390654 CENPPQ6IPU0 288 aa23.24■■□□□ 1.31
COL23A1-201ENST00000390654 AENQ8WTP8 325 aaKnown RBP23.24■■□□□ 1.31
COL23A1-201ENST00000390654 DDX12PQ92771 950 aa23.24■■□□□ 1.31
COL23A1-201ENST00000390654 FGFBP2Q9BYJ0 223 aa23.24■■□□□ 1.31
COL23A1-201ENST00000390654 NARFQ9UHQ1 456 aa23.24■■□□□ 1.31
COL23A1-201ENST00000390654 MARCH6O60337 910 aa23.24■■□□□ 1.31
COL23A1-201ENST00000390654 KRT14P02533 472 aa23.24■■□□□ 1.31
COL23A1-201ENST00000390654 RFC4P35249 363 aa23.24■■□□□ 1.31
COL23A1-201ENST00000390654 TRADDQ15628 312 aa23.24■■□□□ 1.31
COL23A1-201ENST00000390654 IQCEQ6IPM2 695 aa23.24■■□□□ 1.31
COL23A1-201ENST00000390654 AK8Q96MA6 479 aa23.24■■□□□ 1.31
COL23A1-201ENST00000390654 ALS2CR12Q96Q35 445 aa23.24■■□□□ 1.31
COL23A1-201ENST00000390654 TRAF5O00463 557 aa23.24■■□□□ 1.31
COL23A1-201ENST00000390654 LAD1O00515 517 aa23.24■■□□□ 1.31
COL23A1-201ENST00000390654 GNA11P29992 359 aa23.24■■□□□ 1.31
COL23A1-201ENST00000390654 TEX11Q8IYF3 940 aa23.24■■□□□ 1.31
COL23A1-201ENST00000390654 DAGLBQ8NCG7 672 aa23.24■■□□□ 1.31
COL23A1-201ENST00000390654 TSGA10Q9BZW7 698 aa23.24■■□□□ 1.31
COL23A1-201ENST00000390654 NYXQ9GZU5 481 aa23.24■■□□□ 1.31
COL23A1-201ENST00000390654 GOLPH3Q9H4A6 298 aa23.24■■□□□ 1.31
COL23A1-201ENST00000390654 BAG3O95817 575 aa23.23■■□□□ 1.31
COL23A1-201ENST00000390654 IRAK1P51617 712 aa23.23■■□□□ 1.31
COL23A1-201ENST00000390654 GNGT1P63211 74 aa23.23■■□□□ 1.31
COL23A1-201ENST00000390654 ECM1Q16610 540 aa23.23■■□□□ 1.31
COL23A1-201ENST00000390654 C8orf74Q6P047 294 aa23.23■■□□□ 1.31
COL23A1-201ENST00000390654 BCAS4Q8TDM0 211 aa23.23■■□□□ 1.31
COL23A1-201ENST00000390654 UFL1O94874 794 aa23.23■■□□□ 1.31
COL23A1-201ENST00000390654 CCDC40Q4G0X9 1142 aa23.23■■□□□ 1.31
COL23A1-201ENST00000390654 HAUS3Q68CZ6 603 aa23.23■■□□□ 1.31
COL23A1-201ENST00000390654 SPTY2D1Q68D10 685 aaPredicted RBP23.23■■□□□ 1.31
COL23A1-201ENST00000390654 RUFY1Q96T51 708 aa23.23■■□□□ 1.31
COL23A1-201ENST00000390654 PHLPP1O60346 1717 aa23.22■■□□□ 1.31
COL23A1-201ENST00000390654 TM4SF1P30408 202 aa23.22■■□□□ 1.31
COL23A1-201ENST00000390654 PAFAH1B1P43034 410 aa23.22■■□□□ 1.31
COL23A1-201ENST00000390654 MAN2A1Q16706 1144 aa23.22■■□□□ 1.31
COL23A1-201ENST00000390654 FNBP4Q8N3X1 1017 aaPredicted RBP23.22■■□□□ 1.31
COL23A1-201ENST00000390654 TLR10Q9BXR5 811 aa23.22■■□□□ 1.31
COL23A1-201ENST00000390654 NFU1Q9UMS0 254 aa23.22■■□□□ 1.31
COL23A1-201ENST00000390654 HYOU1Q9Y4L1 999 aa23.22■■□□□ 1.31
COL23A1-201ENST00000390654 NPHP3-ACAD11A0A0J9YXS1 232 aa23.22■■□□□ 1.31
COL23A1-201ENST00000390654 RIMBP2O15034 1052 aa23.22■■□□□ 1.31
COL23A1-201ENST00000390654 FAM153BP0C7A2 387 aa23.22■■□□□ 1.31
COL23A1-201ENST00000390654 POLR2FP61218 127 aaKnown RBP23.22■■□□□ 1.31
COL23A1-201ENST00000390654 FAM153CQ494X1 144 aa23.22■■□□□ 1.31
COL23A1-201ENST00000390654 CUEDC2Q9H467 287 aa23.22■■□□□ 1.31
COL23A1-201ENST00000390654 FAM153AQ9UHL3 310 aa23.22■■□□□ 1.31
COL23A1-201ENST00000390654 RPS6KA5O75582 802 aa23.22■■□□□ 1.31
COL23A1-201ENST00000390654 CARSP49589 748 aaKnown RBP23.22■■□□□ 1.31
COL23A1-201ENST00000390654 LIG3P49916 1009 aa23.22■■□□□ 1.31
COL23A1-201ENST00000390654 SLC20A2Q08357 652 aa23.22■■□□□ 1.31
COL23A1-201ENST00000390654 MICALL1Q8N3F8 863 aa23.22■■□□□ 1.31
COL23A1-201ENST00000390654 ZEB2O60315 1214 aa23.21■■□□□ 1.31
COL23A1-201ENST00000390654 GLI1P08151 1106 aa23.21■■□□□ 1.31
COL23A1-201ENST00000390654 PDCLQ13371 301 aa23.21■■□□□ 1.31
COL23A1-201ENST00000390654 GALNT17Q6IS24 598 aa23.21■■□□□ 1.31
COL23A1-201ENST00000390654 STIM2Q9P246 746 aa23.21■■□□□ 1.31
COL23A1-201ENST00000390654 COL14A1Q05707 1796 aaKnown RBP23.21■■□□□ 1.31
COL23A1-201ENST00000390654 BAP1Q92560 729 aa23.21■■□□□ 1.31
COL23A1-201ENST00000390654 CAPS2Q9BXY5 557 aa23.21■■□□□ 1.31
COL23A1-201ENST00000390654 A0A1W2PQJ5 194 aa23.2■■□□□ 1.3
COL23A1-201ENST00000390654 GUCY2DQ02846 1103 aa23.2■■□□□ 1.3
COL23A1-201ENST00000390654 KCNMA1Q12791 1236 aa23.2■■□□□ 1.3
COL23A1-201ENST00000390654 UNC13DQ70J99 1090 aa23.2■■□□□ 1.3
COL23A1-201ENST00000390654 MMGT1Q8N4V1 131 aa23.2■■□□□ 1.3
COL23A1-201ENST00000390654 PACSIN1Q9BY11 444 aa23.2■■□□□ 1.3
COL23A1-201ENST00000390654 THRAP3Q9Y2W1 955 aaKnown RBP23.2■■□□□ 1.3
COL23A1-201ENST00000390654 PALMO75781 387 aa23.2■■□□□ 1.3
COL23A1-201ENST00000390654 SLC16A2P36021 539 aa23.2■■□□□ 1.3
COL23A1-201ENST00000390654 KLHDC7AQ5VTJ3 777 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms