RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 TTI2Q6NXR4 508 aa20.35■□□□□ 0.85
ACTN4-202ENST00000390009 UNC13DQ70J99 1090 aa20.35■□□□□ 0.85
ACTN4-202ENST00000390009 DYMQ7RTS9 669 aa20.35■□□□□ 0.85
ACTN4-202ENST00000390009 IRF2BP1Q8IU81 584 aa20.35■□□□□ 0.85
ACTN4-202ENST00000390009 ETNPPLQ8TBG4 499 aa20.35■□□□□ 0.85
ACTN4-202ENST00000390009 TRIM47Q96LD4 638 aa20.35■□□□□ 0.85
ACTN4-202ENST00000390009 TEPSINQ96N21 525 aa20.35■□□□□ 0.85
ACTN4-202ENST00000390009 SGIP1Q9BQI5 828 aa20.35■□□□□ 0.85
ACTN4-202ENST00000390009 NT5C3AQ9H0P0 336 aa20.35■□□□□ 0.85
ACTN4-202ENST00000390009 VPS16Q9H269 839 aa20.35■□□□□ 0.85
ACTN4-202ENST00000390009 LTBP3Q9NS15 1303 aa20.35■□□□□ 0.85
ACTN4-202ENST00000390009 PVALEFA0A1B0GWK0 134 aa20.35■□□□□ 0.85
ACTN4-202ENST00000390009 TBX3O15119 743 aa20.35■□□□□ 0.85
ACTN4-202ENST00000390009 RASSF7Q02833 373 aa20.35■□□□□ 0.85
ACTN4-202ENST00000390009 FAM160B2Q86V87 743 aa20.35■□□□□ 0.85
ACTN4-202ENST00000390009 CREBRFQ8IUR6 639 aa20.35■□□□□ 0.85
ACTN4-202ENST00000390009 KIAA0895Q8NCT3 520 aa20.35■□□□□ 0.85
ACTN4-202ENST00000390009 LENG9Q96B70 501 aa20.35■□□□□ 0.85
ACTN4-202ENST00000390009 LRRC27Q9C0I9 530 aa20.35■□□□□ 0.85
ACTN4-202ENST00000390009 THAP9Q9H5L6 903 aa20.35■□□□□ 0.85
ACTN4-202ENST00000390009 TAB2Q9NYJ8 693 aa20.35■□□□□ 0.85
ACTN4-202ENST00000390009 FAM86B1E9PN63 330 aa20.34■□□□□ 0.85
ACTN4-202ENST00000390009 FAM86B2P0C5J1 330 aa20.34■□□□□ 0.85
ACTN4-202ENST00000390009 GMPSP49915 693 aaPredicted RBP20.34■□□□□ 0.85
ACTN4-202ENST00000390009 COBLL1Q53SF7 1204 aa20.34■□□□□ 0.85
ACTN4-202ENST00000390009 MICALL2Q8IY33 904 aa20.34■□□□□ 0.85
ACTN4-202ENST00000390009 P2RX5Q93086 422 aa20.34■□□□□ 0.85
ACTN4-202ENST00000390009 HPS3Q969F9 1004 aa20.34■□□□□ 0.85
ACTN4-202ENST00000390009 PPP1R13BQ96KQ4 1090 aa20.34■□□□□ 0.85
ACTN4-202ENST00000390009 BAG1Q99933 345 aaPredicted RBP20.34■□□□□ 0.85
ACTN4-202ENST00000390009 SRRTQ9BXP5 876 aaKnown RBP20.34■□□□□ 0.85
ACTN4-202ENST00000390009 FEM1BQ9UK73 627 aa20.34■□□□□ 0.85
ACTN4-202ENST00000390009 BICDL2A1A5D9 508 aa20.33■□□□□ 0.85
ACTN4-202ENST00000390009 CCNE1P24864 410 aa20.33■□□□□ 0.85
ACTN4-202ENST00000390009 CIITAP33076 1130 aa20.33■□□□□ 0.85
ACTN4-202ENST00000390009 CEP135Q66GS9 1140 aa20.33■□□□□ 0.85
ACTN4-202ENST00000390009 SAMD7Q7Z3H4 446 aa20.33■□□□□ 0.85
ACTN4-202ENST00000390009 TEX2Q8IWB9 1127 aa20.33■□□□□ 0.85
ACTN4-202ENST00000390009 DDX12PQ92771 950 aa20.33■□□□□ 0.85
ACTN4-202ENST00000390009 ZNF341Q9BYN7 854 aa20.33■□□□□ 0.85
ACTN4-202ENST00000390009 ITIH6Q6UXX5 1313 aa20.33■□□□□ 0.84
ACTN4-202ENST00000390009 AKR1B15C9JRZ8 316 aaPredicted RBP20.33■□□□□ 0.84
ACTN4-202ENST00000390009 ARHGAP6O43182 974 aa20.33■□□□□ 0.84
ACTN4-202ENST00000390009 CFBP00751 764 aa20.33■□□□□ 0.84
ACTN4-202ENST00000390009 FCHSD1Q86WN1 690 aa20.33■□□□□ 0.84
ACTN4-202ENST00000390009 FEZ1Q99689 392 aa20.33■□□□□ 0.84
ACTN4-202ENST00000390009 DUSP9Q99956 384 aaKnown RBP20.33■□□□□ 0.84
ACTN4-202ENST00000390009 SLC39A2Q9NP94 309 aa20.33■□□□□ 0.84
ACTN4-202ENST00000390009 FBXO28Q9NVF7 368 aa20.33■□□□□ 0.84
ACTN4-202ENST00000390009 GJA3Q9Y6H8 435 aa20.33■□□□□ 0.84
ACTN4-202ENST00000390009 SLC26A4O43511 780 aa20.32■□□□□ 0.84
ACTN4-202ENST00000390009 STX10O60499 249 aa20.32■□□□□ 0.84
ACTN4-202ENST00000390009 CYP3A4P08684 503 aa20.32■□□□□ 0.84
ACTN4-202ENST00000390009 EEF1GP26641 437 aaKnown RBP20.32■□□□□ 0.84
ACTN4-202ENST00000390009 STAT3P40763 770 aa20.32■□□□□ 0.84
ACTN4-202ENST00000390009 PRELPP51888 382 aa20.32■□□□□ 0.84
ACTN4-202ENST00000390009 RBL2Q08999 1139 aa20.32■□□□□ 0.84
ACTN4-202ENST00000390009 SPIRE1Q08AE8 756 aa20.32■□□□□ 0.84
ACTN4-202ENST00000390009 SAMD1Q6SPF0 538 aaPredicted RBP20.32■□□□□ 0.84
ACTN4-202ENST00000390009 PPFIBP1Q86W92 1011 aa20.32■□□□□ 0.84
ACTN4-202ENST00000390009 CSGALNACT2Q8N6G5 542 aa20.32■□□□□ 0.84
ACTN4-202ENST00000390009 NOC3LQ8WTT2 800 aaKnown RBP20.32■□□□□ 0.84
ACTN4-202ENST00000390009 KIAA1024Q9UPX6 916 aa20.32■□□□□ 0.84
ACTN4-202ENST00000390009 POTEB3A0JP26 581 aa20.32■□□□□ 0.84
ACTN4-202ENST00000390009 POTECB2RU33 542 aa20.32■□□□□ 0.84
ACTN4-202ENST00000390009 FZD9O00144 591 aa20.32■□□□□ 0.84
ACTN4-202ENST00000390009 TBC1D10BQ4KMP7 808 aaPredicted RBP20.32■□□□□ 0.84
ACTN4-202ENST00000390009 ANKRD40Q6AI12 368 aa20.32■□□□□ 0.84
ACTN4-202ENST00000390009 POTEBQ6S5H4 581 aa20.32■□□□□ 0.84
ACTN4-202ENST00000390009 TBC1D5Q92609 795 aa20.32■□□□□ 0.84
ACTN4-202ENST00000390009 CNOT7Q9UIV1 285 aaKnown RBP20.32■□□□□ 0.84
ACTN4-202ENST00000390009 ASTN2O75129 1339 aaPredicted RBP20.31■□□□□ 0.84
ACTN4-202ENST00000390009 RIOK3O14730 519 aaKnown RBP20.31■□□□□ 0.84
ACTN4-202ENST00000390009 IDEP14735 1019 aa20.31■□□□□ 0.84
ACTN4-202ENST00000390009 HAUS3Q68CZ6 603 aa20.31■□□□□ 0.84
ACTN4-202ENST00000390009 FAM20AQ96MK3 541 aa20.31■□□□□ 0.84
ACTN4-202ENST00000390009 MRPL11Q9Y3B7 192 aaKnown RBP20.31■□□□□ 0.84
ACTN4-202ENST00000390009 PAXBP1Q9Y5B6 917 aa20.31■□□□□ 0.84
ACTN4-202ENST00000390009 E9PMD0 336 aa20.3■□□□□ 0.84
ACTN4-202ENST00000390009 GCOM1H8Y6P7 765 aaPredicted RBP20.3■□□□□ 0.84
ACTN4-202ENST00000390009 CCP110O43303 1012 aa20.3■□□□□ 0.84
ACTN4-202ENST00000390009 POLR2MP0CAP2 368 aa20.3■□□□□ 0.84
ACTN4-202ENST00000390009 ZNF76P36508 570 aa20.3■□□□□ 0.84
ACTN4-202ENST00000390009 CYP2W1Q8TAV3 490 aa20.3■□□□□ 0.84
ACTN4-202ENST00000390009 ZNF592Q92610 1267 aa20.3■□□□□ 0.84
ACTN4-202ENST00000390009 PANX2Q96RD6 677 aa20.3■□□□□ 0.84
ACTN4-202ENST00000390009 MAGEC2Q9UBF1 373 aaPredicted RBP20.3■□□□□ 0.84
ACTN4-202ENST00000390009 HACL1Q9UJ83 578 aa20.3■□□□□ 0.84
ACTN4-202ENST00000390009 MSH4O15457 936 aa20.3■□□□□ 0.84
ACTN4-202ENST00000390009 MED24O75448 989 aa20.3■□□□□ 0.84
ACTN4-202ENST00000390009 GTF2F1P35269 517 aaKnown RBP eCLIP20.3■□□□□ 0.843e-7■■■■■ 30.3
ACTN4-202ENST00000390009 EHHADHQ08426 723 aa20.3■□□□□ 0.84
ACTN4-202ENST00000390009 CPLX3Q8WVH0 158 aa20.3■□□□□ 0.84
ACTN4-202ENST00000390009 DNAJC19Q96DA6 116 aa20.3■□□□□ 0.84
ACTN4-202ENST00000390009 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.3■□□□□ 0.843e-7■■■□□ 15.1
ACTN4-202ENST00000390009 KIF2AO00139 706 aaPredicted RBP20.29■□□□□ 0.84
ACTN4-202ENST00000390009 DYNC1I1O14576 645 aa20.29■□□□□ 0.84
ACTN4-202ENST00000390009 MFAP3LO75121 409 aa20.29■□□□□ 0.84
ACTN4-202ENST00000390009 GYPCP04921 128 aa20.29■□□□□ 0.84
ACTN4-202ENST00000390009 SSBP05455 408 aaKnown RBP eCLIP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms