RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 TRAF1Q13077 416 aa20.8■□□□□ 0.92
PPFIA1-202ENST00000389547 BEND6Q5SZJ8 279 aaPredicted RBP20.8■□□□□ 0.92
PPFIA1-202ENST00000389547 GPATCH4Q5T3I0 446 aaKnown RBP20.8■□□□□ 0.92
PPFIA1-202ENST00000389547 FBXO11Q86XK2 927 aa20.8■□□□□ 0.92
PPFIA1-202ENST00000389547 FOXP4Q8IVH2 680 aaPredicted RBP20.8■□□□□ 0.92
PPFIA1-202ENST00000389547 TBCKQ8TEA7 893 aa20.8■□□□□ 0.92
PPFIA1-202ENST00000389547 PNKPQ96T60 521 aa20.8■□□□□ 0.92
PPFIA1-202ENST00000389547 DONSONQ9NYP3 566 aa20.8■□□□□ 0.92
PPFIA1-202ENST00000389547 EEF2P13639 858 aaKnown RBP20.79■□□□□ 0.92
PPFIA1-202ENST00000389547 ASPRV1Q53RT3 343 aa20.79■□□□□ 0.92
PPFIA1-202ENST00000389547 ERMNQ8TAM6 284 aa20.79■□□□□ 0.92
PPFIA1-202ENST00000389547 KDM3BQ7LBC6 1761 aa20.79■□□□□ 0.92
PPFIA1-202ENST00000389547 ELF1P32519 619 aa20.79■□□□□ 0.92
PPFIA1-202ENST00000389547 TCERG1LQ5VWI1 586 aa20.79■□□□□ 0.92
PPFIA1-202ENST00000389547 RMND1Q9NWS8 449 aa20.79■□□□□ 0.92
PPFIA1-202ENST00000389547 TLDC2A0PJX2 215 aa20.79■□□□□ 0.92
PPFIA1-202ENST00000389547 SMIM23A6NLE4 172 aa20.79■□□□□ 0.92
PPFIA1-202ENST00000389547 HGSO14964 777 aaPredicted RBP20.79■□□□□ 0.92
PPFIA1-202ENST00000389547 SLURP2P0DP57 97 aa20.79■□□□□ 0.92
PPFIA1-202ENST00000389547 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.79■□□□□ 0.92
PPFIA1-202ENST00000389547 PSMA7O14818 248 aa20.78■□□□□ 0.92
PPFIA1-202ENST00000389547 ALAS1P13196 640 aa20.78■□□□□ 0.92
PPFIA1-202ENST00000389547 CCDC40Q4G0X9 1142 aa20.78■□□□□ 0.92
PPFIA1-202ENST00000389547 TTBK2Q6IQ55 1244 aa20.78■□□□□ 0.92
PPFIA1-202ENST00000389547 SELENOSQ9BQE4 189 aa20.78■□□□□ 0.92
PPFIA1-202ENST00000389547 AFDNP55196 1824 aaKnown RBP20.78■□□□□ 0.92
PPFIA1-202ENST00000389547 MYO1FO00160 1098 aa20.78■□□□□ 0.92
PPFIA1-202ENST00000389547 CLTAP09496 248 aa20.78■□□□□ 0.92
PPFIA1-202ENST00000389547 RBM43Q6ZSC3 357 aaKnown RBP20.78■□□□□ 0.92
PPFIA1-202ENST00000389547 CABP7Q86V35 215 aa20.78■□□□□ 0.92
PPFIA1-202ENST00000389547 RTFDC1Q9BY42 306 aaPredicted RBP20.78■□□□□ 0.92
PPFIA1-202ENST00000389547 TMCO5BA8MYB1 307 aa20.78■□□□□ 0.92
PPFIA1-202ENST00000389547 PRR29P0C7W0 189 aa20.78■□□□□ 0.92
PPFIA1-202ENST00000389547 HOXA10P31260 410 aaPredicted RBP20.78■□□□□ 0.92
PPFIA1-202ENST00000389547 PRR16Q569H4 304 aa20.78■□□□□ 0.92
PPFIA1-202ENST00000389547 SPATS2Q86XZ4 545 aaKnown RBP20.78■□□□□ 0.92
PPFIA1-202ENST00000389547 NBPF3Q9H094 633 aa20.78■□□□□ 0.92
PPFIA1-202ENST00000389547 LRRC37A3O60309 1634 aa20.78■□□□□ 0.92
PPFIA1-202ENST00000389547 PSMD14O00487 310 aa20.77■□□□□ 0.92
PPFIA1-202ENST00000389547 SRGAP2O75044 1071 aa20.77■□□□□ 0.92
PPFIA1-202ENST00000389547 MYCLP12524 364 aaPredicted RBP20.77■□□□□ 0.92
PPFIA1-202ENST00000389547 TROAPQ12815 778 aa20.77■□□□□ 0.92
PPFIA1-202ENST00000389547 CCDC84Q86UT8 332 aaPredicted RBP20.77■□□□□ 0.92
PPFIA1-202ENST00000389547 MRPL44Q9H9J2 332 aaKnown RBP20.77■□□□□ 0.92
PPFIA1-202ENST00000389547 SELENOOQ9BVL4 669 aa20.77■□□□□ 0.92
PPFIA1-202ENST00000389547 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.77■□□□□ 0.92
PPFIA1-202ENST00000389547 BMP3P12645 472 aa20.77■□□□□ 0.92
PPFIA1-202ENST00000389547 PPP4CP60510 307 aa20.77■□□□□ 0.92
PPFIA1-202ENST00000389547 PDE4DQ08499 809 aa20.77■□□□□ 0.92
PPFIA1-202ENST00000389547 PFKFB3Q16875 520 aaPredicted RBP20.77■□□□□ 0.92
PPFIA1-202ENST00000389547 CHURC1Q8WUH1 139 aa20.77■□□□□ 0.92
PPFIA1-202ENST00000389547 RPGRIP1Q96KN7 1286 aa20.77■□□□□ 0.92
PPFIA1-202ENST00000389547 EPN1Q9Y6I3 576 aaPredicted RBP20.77■□□□□ 0.92
PPFIA1-202ENST00000389547 CASP1P29466 404 aa20.76■□□□□ 0.91
PPFIA1-202ENST00000389547 STYK1Q6J9G0 422 aa20.76■□□□□ 0.91
PPFIA1-202ENST00000389547 PDGFDQ9GZP0 370 aaPredicted RBP20.76■□□□□ 0.91
PPFIA1-202ENST00000389547 FLOT1O75955 427 aa20.76■□□□□ 0.91
PPFIA1-202ENST00000389547 SCP2P22307 547 aa20.76■□□□□ 0.91
PPFIA1-202ENST00000389547 TSG101Q99816 390 aa20.76■□□□□ 0.91
PPFIA1-202ENST00000389547 TBC1D7Q9P0N9 293 aa20.76■□□□□ 0.91
PPFIA1-202ENST00000389547 USP17L10C9JJH3 530 aa20.76■□□□□ 0.91
PPFIA1-202ENST00000389547 PPP6R2O75170 966 aa20.76■□□□□ 0.91
PPFIA1-202ENST00000389547 SLC8A1P32418 973 aa20.76■□□□□ 0.91
PPFIA1-202ENST00000389547 SV2BQ7L1I2 683 aa20.76■□□□□ 0.91
PPFIA1-202ENST00000389547 UBLCP1Q8WVY7 318 aaPredicted RBP20.76■□□□□ 0.91
PPFIA1-202ENST00000389547 PRMT6Q96LA8 375 aaPredicted RBP20.76■□□□□ 0.91
PPFIA1-202ENST00000389547 CD248Q9HCU0 757 aa20.76■□□□□ 0.91
PPFIA1-202ENST00000389547 PRAMEF18Q5VWM3 479 aa20.76■□□□□ 0.91
PPFIA1-202ENST00000389547 SMYD4Q8IYR2 804 aaPredicted RBP20.76■□□□□ 0.91
PPFIA1-202ENST00000389547 MTA3Q9BTC8 594 aa20.76■□□□□ 0.91
PPFIA1-202ENST00000389547 ADGRG1Q9Y653 693 aa20.76■□□□□ 0.91
PPFIA1-202ENST00000389547 PPP1R12BO60237 982 aaPredicted RBP20.75■□□□□ 0.91
PPFIA1-202ENST00000389547 TBCAO75347 108 aaKnown RBP20.75■□□□□ 0.91
PPFIA1-202ENST00000389547 OR52Z1P0C646 297 aa20.75■□□□□ 0.91
PPFIA1-202ENST00000389547 C2orf54Q08AI8 447 aa20.75■□□□□ 0.91
PPFIA1-202ENST00000389547 RASGRP2Q7LDG7 609 aa20.75■□□□□ 0.91
PPFIA1-202ENST00000389547 L1RE1Q9UN81 338 aa20.75■□□□□ 0.91
PPFIA1-202ENST00000389547 RBBP5Q15291 538 aaKnown RBP20.75■□□□□ 0.91
PPFIA1-202ENST00000389547 AMNQ9BXJ7 453 aa20.75■□□□□ 0.91
PPFIA1-202ENST00000389547 RGL2O15211 777 aa20.75■□□□□ 0.91
PPFIA1-202ENST00000389547 TRIM65Q6PJ69 517 aa20.75■□□□□ 0.91
PPFIA1-202ENST00000389547 TCP11Q8WWU5 503 aa20.75■□□□□ 0.91
PPFIA1-202ENST00000389547 MTMR4Q9NYA4 1195 aa20.75■□□□□ 0.91
PPFIA1-202ENST00000389547 ZNRF3Q9ULT6 936 aa20.75■□□□□ 0.91
PPFIA1-202ENST00000389547 PCDHA12Q9UN75 941 aa20.75■□□□□ 0.91
PPFIA1-202ENST00000389547 USP17L15C9J2P7 530 aa20.74■□□□□ 0.91
PPFIA1-202ENST00000389547 USP17L13C9JLJ4 530 aa20.74■□□□□ 0.91
PPFIA1-202ENST00000389547 USP17L11C9JVI0 530 aa20.74■□□□□ 0.91
PPFIA1-202ENST00000389547 USP17L18D6R9N7 530 aa20.74■□□□□ 0.91
PPFIA1-202ENST00000389547 USP17L22D6RA61 530 aa20.74■□□□□ 0.91
PPFIA1-202ENST00000389547 USP17L17D6RBQ6 530 aa20.74■□□□□ 0.91
PPFIA1-202ENST00000389547 USP17L19D6RCP7 530 aa20.74■□□□□ 0.91
PPFIA1-202ENST00000389547 USP17L20D6RJB6 530 aa20.74■□□□□ 0.91
PPFIA1-202ENST00000389547 F5H6K3 240 aa20.74■□□□□ 0.91
PPFIA1-202ENST00000389547 HOXA13P31271 388 aaPredicted RBP20.74■□□□□ 0.91
PPFIA1-202ENST00000389547 KLRC3Q07444 240 aa20.74■□□□□ 0.91
PPFIA1-202ENST00000389547 USP17L24Q0WX57 530 aa20.74■□□□□ 0.91
PPFIA1-202ENST00000389547 USP17L6PQ6QN14 398 aa20.74■□□□□ 0.91
PPFIA1-202ENST00000389547 NOA1Q8NC60 698 aaKnown RBP20.74■□□□□ 0.91
PPFIA1-202ENST00000389547 ANAPC4Q9UJX5 808 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms