RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 CACNB3P54284 484 aa13□□□□□ -0.33
RAPGEF3-201ENST00000389212 VSNL1P62760 191 aa13□□□□□ -0.33
RAPGEF3-201ENST00000389212 CCDC155Q8N6L0 562 aa13□□□□□ -0.33
RAPGEF3-201ENST00000389212 SMCR8Q8TEV9 937 aaPredicted RBP13□□□□□ -0.33
RAPGEF3-201ENST00000389212 CALML4Q96GE6 196 aa13□□□□□ -0.33
RAPGEF3-201ENST00000389212 LZTS2Q9BRK4 669 aa13□□□□□ -0.33
RAPGEF3-201ENST00000389212 ABCB6Q9NP58 842 aa13□□□□□ -0.33
RAPGEF3-201ENST00000389212 FAM207AQ9NSI2 230 aaPredicted RBP13□□□□□ -0.33
RAPGEF3-201ENST00000389212 BLOC1S4Q9NUP1 217 aa13□□□□□ -0.33
RAPGEF3-201ENST00000389212 MYO6Q9UM54 1294 aa13□□□□□ -0.33
RAPGEF3-201ENST00000389212 CAPN11Q9UMQ6 739 aa13□□□□□ -0.33
RAPGEF3-201ENST00000389212 CTAGE15A4D2H0 777 aa13□□□□□ -0.33
RAPGEF3-201ENST00000389212 H3BQF6 201 aa13□□□□□ -0.33
RAPGEF3-201ENST00000389212 CTAGE8P0CG41 777 aa13□□□□□ -0.33
RAPGEF3-201ENST00000389212 SRGNP10124 158 aa13□□□□□ -0.33
RAPGEF3-201ENST00000389212 IL1R1P14778 569 aa13□□□□□ -0.33
RAPGEF3-201ENST00000389212 CACNB1Q02641 598 aaPredicted RBP13□□□□□ -0.33
RAPGEF3-201ENST00000389212 DDR1Q08345 913 aa13□□□□□ -0.33
RAPGEF3-201ENST00000389212 CTAGE6Q86UF2 777 aa13□□□□□ -0.33
RAPGEF3-201ENST00000389212 CTAGE4Q8IX94 777 aa13□□□□□ -0.33
RAPGEF3-201ENST00000389212 CDK5RAP3Q96JB5 506 aa13□□□□□ -0.33
RAPGEF3-201ENST00000389212 PNMA5Q96PV4 448 aa13□□□□□ -0.33
RAPGEF3-201ENST00000389212 MTMR4Q9NYA4 1195 aa13□□□□□ -0.33
RAPGEF3-201ENST00000389212 TBC1D7Q9P0N9 293 aa13□□□□□ -0.33
RAPGEF3-201ENST00000389212 LTBP4Q8N2S1 1624 aa13□□□□□ -0.33
RAPGEF3-201ENST00000389212 LAD1O00515 517 aa13□□□□□ -0.33
RAPGEF3-201ENST00000389212 CAND2O75155 1236 aa13□□□□□ -0.33
RAPGEF3-201ENST00000389212 ZMYND10O75800 440 aa13□□□□□ -0.33
RAPGEF3-201ENST00000389212 DNM2P50570 870 aa13□□□□□ -0.33
RAPGEF3-201ENST00000389212 RBM5P52756 815 aaKnown RBP eCLIP13□□□□□ -0.33
RAPGEF3-201ENST00000389212 CCDC96Q2M329 555 aa13□□□□□ -0.33
RAPGEF3-201ENST00000389212 MIIPQ5JXC2 388 aa13□□□□□ -0.33
RAPGEF3-201ENST00000389212 ARMC3Q5W041 872 aa13□□□□□ -0.33
RAPGEF3-201ENST00000389212 CCDC102AQ96A19 550 aa13□□□□□ -0.33
RAPGEF3-201ENST00000389212 DHTKD1Q96HY7 919 aaPredicted RBP13□□□□□ -0.33
RAPGEF3-201ENST00000389212 RBM17Q96I25 401 aaKnown RBP13□□□□□ -0.33
RAPGEF3-201ENST00000389212 DNAJC7Q99615 494 aa13□□□□□ -0.33
RAPGEF3-201ENST00000389212 PCDHAC2Q9Y5I4 1007 aa13□□□□□ -0.33
RAPGEF3-201ENST00000389212 RGL2O15211 777 aa12.99□□□□□ -0.33
RAPGEF3-201ENST00000389212 PPP1R11O60927 126 aaPredicted RBP12.99□□□□□ -0.33
RAPGEF3-201ENST00000389212 PEX19P40855 299 aa12.99□□□□□ -0.33
RAPGEF3-201ENST00000389212 ADCY7P51828 1080 aa12.99□□□□□ -0.33
RAPGEF3-201ENST00000389212 ECM1Q16610 540 aa12.99□□□□□ -0.33
RAPGEF3-201ENST00000389212 CERS5Q8N5B7 392 aa12.99□□□□□ -0.33
RAPGEF3-201ENST00000389212 SNX29Q8TEQ0 813 aa12.99□□□□□ -0.33
RAPGEF3-201ENST00000389212 CCDC47Q96A33 483 aaKnown RBP12.99□□□□□ -0.33
RAPGEF3-201ENST00000389212 GDAP1L1Q96MZ0 367 aa12.99□□□□□ -0.33
RAPGEF3-201ENST00000389212 KANSL2Q9H9L4 492 aa12.99□□□□□ -0.33
RAPGEF3-201ENST00000389212 NHEJ1Q9H9Q4 299 aaPredicted RBP12.99□□□□□ -0.33
RAPGEF3-201ENST00000389212 ZNF185O15231 689 aa12.99□□□□□ -0.33
RAPGEF3-201ENST00000389212 SV2BQ7L1I2 683 aa12.99□□□□□ -0.33
RAPGEF3-201ENST00000389212 AK8Q96MA6 479 aa12.99□□□□□ -0.33
RAPGEF3-201ENST00000389212 C7orf25Q9BPX7 421 aa12.99□□□□□ -0.33
RAPGEF3-201ENST00000389212 N4BP1O75113 896 aaKnown RBP12.98□□□□□ -0.33
RAPGEF3-201ENST00000389212 TAL1P17542 331 aaPredicted RBP12.98□□□□□ -0.33
RAPGEF3-201ENST00000389212 AMPD2Q01433 879 aa12.98□□□□□ -0.33
RAPGEF3-201ENST00000389212 JAKMIP2Q96AA8 810 aa12.98□□□□□ -0.33
RAPGEF3-201ENST00000389212 PDE11AQ9HCR9 933 aa12.98□□□□□ -0.33
RAPGEF3-201ENST00000389212 CDK5RAP2Q96SN8 1893 aa12.98□□□□□ -0.33
RAPGEF3-201ENST00000389212 A0A1W2PQC6 194 aa12.98□□□□□ -0.33
RAPGEF3-201ENST00000389212 MARCH6O60337 910 aa12.98□□□□□ -0.33
RAPGEF3-201ENST00000389212 CLSTN1O94985 981 aa12.98□□□□□ -0.33
RAPGEF3-201ENST00000389212 PLCG2P16885 1265 aa12.98□□□□□ -0.33
RAPGEF3-201ENST00000389212 USP8P40818 1118 aa12.98□□□□□ -0.33
RAPGEF3-201ENST00000389212 SNAP25P60880 206 aa12.98□□□□□ -0.33
RAPGEF3-201ENST00000389212 MRPS25P82663 173 aaKnown RBP12.98□□□□□ -0.33
RAPGEF3-201ENST00000389212 CRY2Q49AN0 593 aa12.98□□□□□ -0.33
RAPGEF3-201ENST00000389212 ADGRF4Q8IZF3 695 aa12.98□□□□□ -0.33
RAPGEF3-201ENST00000389212 FNBP4Q8N3X1 1017 aaPredicted RBP12.98□□□□□ -0.33
RAPGEF3-201ENST00000389212 TTYH3Q9C0H2 523 aa12.98□□□□□ -0.33
RAPGEF3-201ENST00000389212 RIOX1Q9H6W3 641 aa12.98□□□□□ -0.33
RAPGEF3-201ENST00000389212 MMRN2Q9H8L6 949 aa12.98□□□□□ -0.33
RAPGEF3-201ENST00000389212 CCDC151A5D8V7 595 aa12.98□□□□□ -0.33
RAPGEF3-201ENST00000389212 USP17L10C9JJH3 530 aa12.98□□□□□ -0.33
RAPGEF3-201ENST00000389212 PAX7P23759 505 aa12.98□□□□□ -0.33
RAPGEF3-201ENST00000389212 TCP10Q12799 353 aa12.98□□□□□ -0.33
RAPGEF3-201ENST00000389212 NFIAQ12857 509 aa12.98□□□□□ -0.33
RAPGEF3-201ENST00000389212 ZFPM1Q8IX07 1006 aa12.98□□□□□ -0.33
RAPGEF3-201ENST00000389212 LARP4BQ92615 738 aaKnown RBP12.98□□□□□ -0.33
RAPGEF3-201ENST00000389212 MTMR9Q96QG7 549 aa12.98□□□□□ -0.33
RAPGEF3-201ENST00000389212 MMS19Q96T76 1030 aa12.98□□□□□ -0.33
RAPGEF3-201ENST00000389212 PSMB7Q99436 277 aa12.98□□□□□ -0.33
RAPGEF3-201ENST00000389212 USP40Q9NVE5 1235 aa12.98□□□□□ -0.33
RAPGEF3-201ENST00000389212 MYH1P12882 1939 aa12.98□□□□□ -0.33
RAPGEF3-201ENST00000389212 BEND6Q5SZJ8 279 aaPredicted RBP12.97□□□□□ -0.33
RAPGEF3-201ENST00000389212 MEX3CQ5U5Q3 659 aaKnown RBP12.97□□□□□ -0.33
RAPGEF3-201ENST00000389212 FBXW10Q5XX13 1052 aa12.97□□□□□ -0.33
RAPGEF3-201ENST00000389212 JMJD4Q9H9V9 463 aa12.97□□□□□ -0.33
RAPGEF3-201ENST00000389212 KCNQ5Q9NR82 932 aa12.97□□□□□ -0.33
RAPGEF3-201ENST00000389212 BICDL2A1A5D9 508 aa12.97□□□□□ -0.33
RAPGEF3-201ENST00000389212 USP17L15C9J2P7 530 aa12.97□□□□□ -0.33
RAPGEF3-201ENST00000389212 USP17L13C9JLJ4 530 aa12.97□□□□□ -0.33
RAPGEF3-201ENST00000389212 USP17L11C9JVI0 530 aa12.97□□□□□ -0.33
RAPGEF3-201ENST00000389212 USP17L18D6R9N7 530 aa12.97□□□□□ -0.33
RAPGEF3-201ENST00000389212 USP17L22D6RA61 530 aa12.97□□□□□ -0.33
RAPGEF3-201ENST00000389212 USP17L17D6RBQ6 530 aa12.97□□□□□ -0.33
RAPGEF3-201ENST00000389212 USP17L19D6RCP7 530 aa12.97□□□□□ -0.33
RAPGEF3-201ENST00000389212 USP17L20D6RJB6 530 aa12.97□□□□□ -0.33
RAPGEF3-201ENST00000389212 ZNF263O14978 683 aa12.97□□□□□ -0.33
RAPGEF3-201ENST00000389212 ERLIN2O94905 339 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms