RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 POLR3EQ9NVU0 708 aa20.79■□□□□ 0.92
CSPG5-202ENST00000383738 NLRX1Q86UT6 975 aa20.79■□□□□ 0.92
CSPG5-202ENST00000383738 C2orf54Q08AI8 447 aa20.79■□□□□ 0.92
CSPG5-202ENST00000383738 EPN1Q9Y6I3 576 aaPredicted RBP20.79■□□□□ 0.92
CSPG5-202ENST00000383738 ANKRD62A6NC57 917 aa20.78■□□□□ 0.92
CSPG5-202ENST00000383738 BUB1O43683 1085 aa20.78■□□□□ 0.92
CSPG5-202ENST00000383738 SRGNP10124 158 aa20.78■□□□□ 0.92
CSPG5-202ENST00000383738 MAGEA9P43362 315 aa20.78■□□□□ 0.92
CSPG5-202ENST00000383738 CTNNBL1Q8WYA6 563 aaPredicted RBP20.78■□□□□ 0.92
CSPG5-202ENST00000383738 GJA10Q969M2 543 aa20.78■□□□□ 0.92
CSPG5-202ENST00000383738 POTEMA6NI47 508 aa20.78■□□□□ 0.92
CSPG5-202ENST00000383738 ALX1Q15699 326 aa20.78■□□□□ 0.92
CSPG5-202ENST00000383738 FBXW10Q5XX13 1052 aa20.78■□□□□ 0.92
CSPG5-202ENST00000383738 SH2D3AQ9BRG2 576 aa20.78■□□□□ 0.92
CSPG5-202ENST00000383738 FGFR2P21802 821 aa20.78■□□□□ 0.92
CSPG5-202ENST00000383738 GJC1P36383 396 aa20.78■□□□□ 0.92
CSPG5-202ENST00000383738 EVX2Q03828 476 aa20.78■□□□□ 0.92
CSPG5-202ENST00000383738 PAIP2Q9BPZ3 127 aaKnown RBP20.78■□□□□ 0.92
CSPG5-202ENST00000383738 MAN1B1Q9UKM7 699 aa20.78■□□□□ 0.92
CSPG5-202ENST00000383738 KIF4AO95239 1232 aa20.77■□□□□ 0.92
CSPG5-202ENST00000383738 TBC1D8O95759 1140 aa20.77■□□□□ 0.92
CSPG5-202ENST00000383738 PDCLQ13371 301 aa20.77■□□□□ 0.92
CSPG5-202ENST00000383738 BIRC3Q13489 604 aa20.77■□□□□ 0.92
CSPG5-202ENST00000383738 HOOK2Q96ED9 719 aa20.77■□□□□ 0.92
CSPG5-202ENST00000383738 BICDL2A1A5D9 508 aa20.77■□□□□ 0.92
CSPG5-202ENST00000383738 SFI1A8K8P3 1242 aa20.77■□□□□ 0.92
CSPG5-202ENST00000383738 CYP2J2P51589 502 aa20.77■□□□□ 0.92
CSPG5-202ENST00000383738 SYDE2Q5VT97 1194 aa20.77■□□□□ 0.92
CSPG5-202ENST00000383738 MIER3Q7Z3K6 550 aa20.77■□□□□ 0.92
CSPG5-202ENST00000383738 MICALL2Q8IY33 904 aa20.77■□□□□ 0.92
CSPG5-202ENST00000383738 PRMT6Q96LA8 375 aaPredicted RBP20.77■□□□□ 0.92
CSPG5-202ENST00000383738 CNOT7Q9UIV1 285 aaKnown RBP20.77■□□□□ 0.92
CSPG5-202ENST00000383738 MRPL11Q9Y3B7 192 aaKnown RBP20.77■□□□□ 0.92
CSPG5-202ENST00000383738 SECISBP2LQ93073 1101 aaKnown RBP20.77■□□□□ 0.91
CSPG5-202ENST00000383738 MPHOSPH6Q99547 160 aaKnown RBP20.77■□□□□ 0.91
CSPG5-202ENST00000383738 RAVER2Q9HCJ3 691 aaKnown RBP20.77■□□□□ 0.91
CSPG5-202ENST00000383738 PNPLA7Q6ZV29 1317 aa20.76■□□□□ 0.91
CSPG5-202ENST00000383738 CTDNEP1O95476 244 aa20.76■□□□□ 0.91
CSPG5-202ENST00000383738 FOXR1Q6PIV2 292 aa20.76■□□□□ 0.91
CSPG5-202ENST00000383738 B4GALNT4Q76KP1 1039 aa20.76■□□□□ 0.91
CSPG5-202ENST00000383738 UHMK1Q8TAS1 419 aaKnown RBP20.76■□□□□ 0.91
CSPG5-202ENST00000383738 PXDNLA1KZ92 1463 aa20.76■□□□□ 0.91
CSPG5-202ENST00000383738 IKBKBO14920 756 aa20.76■□□□□ 0.91
CSPG5-202ENST00000383738 TUBBP07437 444 aa20.76■□□□□ 0.91
CSPG5-202ENST00000383738 CNNM4Q6P4Q7 775 aa20.76■□□□□ 0.91
CSPG5-202ENST00000383738 USP49Q70CQ1 688 aa20.76■□□□□ 0.91
CSPG5-202ENST00000383738 ATP8B1O43520 1251 aa20.76■□□□□ 0.91
CSPG5-202ENST00000383738 FDPSP14324 419 aaKnown RBP20.76■□□□□ 0.91
CSPG5-202ENST00000383738 ST3GAL1Q11201 340 aa20.76■□□□□ 0.91
CSPG5-202ENST00000383738 CCDC25Q86WR0 208 aa20.76■□□□□ 0.91
CSPG5-202ENST00000383738 WHAMMP3Q1A5X7 153 aa20.75■□□□□ 0.91
CSPG5-202ENST00000383738 SEPT14Q6ZU15 432 aa20.75■□□□□ 0.91
CSPG5-202ENST00000383738 TMEM179Q6ZVK1 233 aa20.75■□□□□ 0.91
CSPG5-202ENST00000383738 TFR2Q9UP52 801 aa20.75■□□□□ 0.91
CSPG5-202ENST00000383738 ADGRB2O60241 1585 aa20.75■□□□□ 0.91
CSPG5-202ENST00000383738 TMEM110-MUSTN1A8MSY1 372 aa20.75■□□□□ 0.91
CSPG5-202ENST00000383738 IGBP1P78318 339 aa20.75■□□□□ 0.91
CSPG5-202ENST00000383738 CEP85LQ5SZL2 805 aa20.75■□□□□ 0.91
CSPG5-202ENST00000383738 OR8K1Q8NGG5 319 aa20.75■□□□□ 0.91
CSPG5-202ENST00000383738 MED4Q9NPJ6 270 aa20.75■□□□□ 0.91
CSPG5-202ENST00000383738 ACTN3Q08043 901 aaPredicted RBP20.75■□□□□ 0.91
CSPG5-202ENST00000383738 VIMP08670 466 aaKnown RBP20.75■□□□□ 0.91
CSPG5-202ENST00000383738 H2AFXP16104 143 aaPredicted RBP20.75■□□□□ 0.91
CSPG5-202ENST00000383738 PPP2R5AQ15172 486 aa20.75■□□□□ 0.91
CSPG5-202ENST00000383738 LRCH2Q5VUJ6 765 aa20.75■□□□□ 0.91
CSPG5-202ENST00000383738 TADA2BQ86TJ2 420 aa20.75■□□□□ 0.91
CSPG5-202ENST00000383738 POTEDQ86YR6 584 aa20.75■□□□□ 0.91
CSPG5-202ENST00000383738 EXOC3O60645 756 aa20.74■□□□□ 0.91
CSPG5-202ENST00000383738 PPFIA1Q13136 1202 aa20.74■□□□□ 0.91
CSPG5-202ENST00000383738 XKR9Q5GH70 373 aa20.74■□□□□ 0.91
CSPG5-202ENST00000383738 SLC10A5Q5PT55 438 aa20.74■□□□□ 0.91
CSPG5-202ENST00000383738 METTL13Q8N6R0 699 aa20.74■□□□□ 0.91
CSPG5-202ENST00000383738 ZNRF3Q9ULT6 936 aa20.74■□□□□ 0.91
CSPG5-202ENST00000383738 GSTTP1A0A1W2PQM5 241 aa20.74■□□□□ 0.91
CSPG5-202ENST00000383738 CETN3O15182 167 aa20.74■□□□□ 0.91
CSPG5-202ENST00000383738 ASNSP08243 561 aa20.74■□□□□ 0.91
CSPG5-202ENST00000383738 MAGEA1P43355 309 aa20.74■□□□□ 0.91
CSPG5-202ENST00000383738 QRICH1Q2TAL8 776 aa20.74■□□□□ 0.91
CSPG5-202ENST00000383738 TSGA10IPQ3SY00 556 aa20.74■□□□□ 0.91
CSPG5-202ENST00000383738 FAM169AQ9Y6X4 670 aa20.74■□□□□ 0.91
CSPG5-202ENST00000383738 EIF4E1BA6NMX2 242 aaKnown RBP20.74■□□□□ 0.91
CSPG5-202ENST00000383738 SASH3O75995 380 aa20.74■□□□□ 0.91
CSPG5-202ENST00000383738 GGCXP38435 758 aa20.74■□□□□ 0.91
CSPG5-202ENST00000383738 AS3MTQ9HBK9 375 aa20.74■□□□□ 0.91
CSPG5-202ENST00000383738 PCDHAC2Q9Y5I4 1007 aa20.74■□□□□ 0.91
CSPG5-202ENST00000383738 A0A087WUV0 522 aaPredicted RBP20.73■□□□□ 0.91
CSPG5-202ENST00000383738 KCNJ18B7U540 433 aa20.73■□□□□ 0.91
CSPG5-202ENST00000383738 H3BQF6 201 aa20.73■□□□□ 0.91
CSPG5-202ENST00000383738 POLRMTO00411 1230 aaKnown RBP20.73■□□□□ 0.91
CSPG5-202ENST00000383738 RASA1P20936 1047 aa20.73■□□□□ 0.91
CSPG5-202ENST00000383738 KCNJ12Q14500 433 aa20.73■□□□□ 0.91
CSPG5-202ENST00000383738 NEDD1Q8NHV4 660 aa20.73■□□□□ 0.91
CSPG5-202ENST00000383738 PPP1R16BQ96T49 567 aa20.73■□□□□ 0.91
CSPG5-202ENST00000383738 GLT8D2Q9H1C3 349 aa20.73■□□□□ 0.91
CSPG5-202ENST00000383738 MLXIPQ9HAP2 919 aa20.73■□□□□ 0.91
CSPG5-202ENST00000383738 SLC24A3Q9HC58 644 aa20.73■□□□□ 0.91
CSPG5-202ENST00000383738 PRR29P0C7W0 189 aa20.73■□□□□ 0.91
CSPG5-202ENST00000383738 FAM102BQ5T8I3 360 aa20.73■□□□□ 0.91
CSPG5-202ENST00000383738 STRIP1Q5VSL9 837 aa20.73■□□□□ 0.91
CSPG5-202ENST00000383738 ADGRF4Q8IZF3 695 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms