RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 TANC1Q9C0D5 1861 aa13.34□□□□□ -0.27
APOBEC3F-202ENST00000381565 GOLGA8AA7E2F4 631 aa13.34□□□□□ -0.27
APOBEC3F-202ENST00000381565 GOLGA8BA8MQT2 603 aa13.34□□□□□ -0.27
APOBEC3F-202ENST00000381565 ARIH2O95376 493 aa13.34□□□□□ -0.27
APOBEC3F-202ENST00000381565 C6orf222P0C671 652 aaPredicted RBP13.34□□□□□ -0.27
APOBEC3F-202ENST00000381565 EIF2AK2P19525 551 aaKnown RBP13.34□□□□□ -0.27
APOBEC3F-202ENST00000381565 ACLYP53396 1101 aa13.34□□□□□ -0.27
APOBEC3F-202ENST00000381565 BEX3Q00994 111 aa13.34□□□□□ -0.27
APOBEC3F-202ENST00000381565 TOB2Q14106 344 aaPredicted RBP13.34□□□□□ -0.27
APOBEC3F-202ENST00000381565 TRIM60Q495X7 471 aa13.34□□□□□ -0.27
APOBEC3F-202ENST00000381565 SLC39A5Q6ZMH5 540 aa13.34□□□□□ -0.27
APOBEC3F-202ENST00000381565 RUFY3Q7L099 469 aa13.34□□□□□ -0.27
APOBEC3F-202ENST00000381565 CCDC82Q8N4S0 544 aa13.34□□□□□ -0.27
APOBEC3F-202ENST00000381565 NSUN6Q8TEA1 469 aaKnown RBP13.34□□□□□ -0.27
APOBEC3F-202ENST00000381565 CDX2Q99626 313 aaPredicted RBP13.34□□□□□ -0.27
APOBEC3F-202ENST00000381565 TTYH1Q9H313 450 aaPredicted RBP13.34□□□□□ -0.27
APOBEC3F-202ENST00000381565 PDLIM7Q9NR12 457 aa13.34□□□□□ -0.27
APOBEC3F-202ENST00000381565 RBM28Q9NW13 759 aaKnown RBP13.34□□□□□ -0.27
APOBEC3F-202ENST00000381565 TRIP12Q14669 1992 aaPredicted RBP13.33□□□□□ -0.28
APOBEC3F-202ENST00000381565 TRIM43BA6NCK2 446 aa13.33□□□□□ -0.28
APOBEC3F-202ENST00000381565 SEC24BO95487 1268 aa13.33□□□□□ -0.28
APOBEC3F-202ENST00000381565 PSMA5P28066 241 aa13.33□□□□□ -0.28
APOBEC3F-202ENST00000381565 EVCP57679 992 aa13.33□□□□□ -0.28
APOBEC3F-202ENST00000381565 TRAF1Q13077 416 aa13.33□□□□□ -0.28
APOBEC3F-202ENST00000381565 KCNA10Q16322 511 aa13.33□□□□□ -0.28
APOBEC3F-202ENST00000381565 DUSP28Q4G0W2 176 aa13.33□□□□□ -0.28
APOBEC3F-202ENST00000381565 ZNF697Q5TEC3 545 aa13.33□□□□□ -0.28
APOBEC3F-202ENST00000381565 IQSEC1Q6DN90 963 aa13.33□□□□□ -0.28
APOBEC3F-202ENST00000381565 TYW1BQ6NUM6 668 aa13.33□□□□□ -0.28
APOBEC3F-202ENST00000381565 SH3RF1Q7Z6J0 888 aa13.33□□□□□ -0.28
APOBEC3F-202ENST00000381565 SAMD3Q8N6K7 520 aa13.33□□□□□ -0.28
APOBEC3F-202ENST00000381565 GPKOWQ92917 476 aaPredicted RBP eCLIP13.33□□□□□ -0.28
APOBEC3F-202ENST00000381565 BADQ92934 168 aa13.33□□□□□ -0.28
APOBEC3F-202ENST00000381565 TRIM43Q96BQ3 446 aaPredicted RBP13.33□□□□□ -0.28
APOBEC3F-202ENST00000381565 PDCD2LQ9BRP1 358 aa13.33□□□□□ -0.28
APOBEC3F-202ENST00000381565 TSEN34Q9BSV6 310 aaKnown RBP13.33□□□□□ -0.28
APOBEC3F-202ENST00000381565 WDR11Q9BZH6 1224 aa13.33□□□□□ -0.28
APOBEC3F-202ENST00000381565 UPF3BQ9BZI7 483 aaKnown RBP13.33□□□□□ -0.28
APOBEC3F-202ENST00000381565 TM6SF1Q9BZW5 370 aa13.33□□□□□ -0.28
APOBEC3F-202ENST00000381565 MAP3K20Q9NYL2 800 aaKnown RBP13.33□□□□□ -0.28
APOBEC3F-202ENST00000381565 SEC63Q9UGP8 760 aaKnown RBP13.33□□□□□ -0.28
APOBEC3F-202ENST00000381565 MOXD2PA6NHM9 499 aa13.32□□□□□ -0.28
APOBEC3F-202ENST00000381565 GCOM1H8Y6P7 765 aaPredicted RBP13.32□□□□□ -0.28
APOBEC3F-202ENST00000381565 MEIS2O14770 477 aa13.32□□□□□ -0.28
APOBEC3F-202ENST00000381565 RGS20O76081 388 aa13.32□□□□□ -0.28
APOBEC3F-202ENST00000381565 ASGR1P07306 291 aa13.32□□□□□ -0.28
APOBEC3F-202ENST00000381565 POLR2MP0CAP2 368 aa13.32□□□□□ -0.28
APOBEC3F-202ENST00000381565 ITGB8P26012 769 aa13.32□□□□□ -0.28
APOBEC3F-202ENST00000381565 ADD1P35611 737 aaKnown RBP13.32□□□□□ -0.28
APOBEC3F-202ENST00000381565 PGM5Q15124 567 aa13.32□□□□□ -0.28
APOBEC3F-202ENST00000381565 C1orf53Q5VUE5 145 aa13.32□□□□□ -0.28
APOBEC3F-202ENST00000381565 ARHGEF16Q5VV41 709 aa13.32□□□□□ -0.28
APOBEC3F-202ENST00000381565 WWC2Q6AWC2 1192 aa13.32□□□□□ -0.28
APOBEC3F-202ENST00000381565 CCDC62Q6P9F0 684 aa13.32□□□□□ -0.28
APOBEC3F-202ENST00000381565 SYNE3Q6ZMZ3 975 aa13.32□□□□□ -0.28
APOBEC3F-202ENST00000381565 SCFD2Q8WU76 684 aa13.32□□□□□ -0.28
APOBEC3F-202ENST00000381565 COPS5Q92905 334 aa13.32□□□□□ -0.28
APOBEC3F-202ENST00000381565 IL17RAQ96F46 866 aa13.32□□□□□ -0.28
APOBEC3F-202ENST00000381565 IWS1Q96ST2 819 aa13.32□□□□□ -0.28
APOBEC3F-202ENST00000381565 MPHOSPH6Q99547 160 aaKnown RBP13.32□□□□□ -0.28
APOBEC3F-202ENST00000381565 SEMA6BQ9H3T3 888 aa13.32□□□□□ -0.28
APOBEC3F-202ENST00000381565 Q9Y3F1 56 aa13.32□□□□□ -0.28
APOBEC3F-202ENST00000381565 PIK3CDO00329 1044 aa13.31□□□□□ -0.28
APOBEC3F-202ENST00000381565 DYNC1LI2O43237 492 aaPredicted RBP13.31□□□□□ -0.28
APOBEC3F-202ENST00000381565 NR3C2P08235 984 aa13.31□□□□□ -0.28
APOBEC3F-202ENST00000381565 METAP2P50579 478 aaKnown RBP eCLIP13.31□□□□□ -0.28
APOBEC3F-202ENST00000381565 EPHB4P54760 987 aa13.31□□□□□ -0.28
APOBEC3F-202ENST00000381565 FGD1P98174 961 aa13.31□□□□□ -0.28
APOBEC3F-202ENST00000381565 PPP2R5BQ15173 497 aa13.31□□□□□ -0.28
APOBEC3F-202ENST00000381565 FSCN1Q16658 493 aaKnown RBP13.31□□□□□ -0.28
APOBEC3F-202ENST00000381565 GNASQ5JWF2 1037 aa13.31□□□□□ -0.28
APOBEC3F-202ENST00000381565 USP17L6PQ6QN14 398 aa13.31□□□□□ -0.28
APOBEC3F-202ENST00000381565 FCHSD1Q86WN1 690 aa13.31□□□□□ -0.28
APOBEC3F-202ENST00000381565 MAFAQ8NHW3 353 aaPredicted RBP13.31□□□□□ -0.28
APOBEC3F-202ENST00000381565 PRDM5Q9NQX1 630 aaPredicted RBP13.31□□□□□ -0.28
APOBEC3F-202ENST00000381565 PRKAG2Q9UGJ0 569 aa13.31□□□□□ -0.28
APOBEC3F-202ENST00000381565 TTC28Q96AY4 2481 aa13.31□□□□□ -0.28
APOBEC3F-202ENST00000381565 SCN5AQ14524 2016 aa13.3□□□□□ -0.28
APOBEC3F-202ENST00000381565 B4DLN1 442 aa13.3□□□□□ -0.28
APOBEC3F-202ENST00000381565 MRPL12P52815 198 aaKnown RBP13.3□□□□□ -0.28
APOBEC3F-202ENST00000381565 STXBP2Q15833 593 aa13.3□□□□□ -0.28
APOBEC3F-202ENST00000381565 NTRK3Q16288 839 aa13.3□□□□□ -0.28
APOBEC3F-202ENST00000381565 C8orf34Q49A92 452 aa13.3□□□□□ -0.28
APOBEC3F-202ENST00000381565 NOL8Q76FK4 1167 aaKnown RBP13.3□□□□□ -0.28
APOBEC3F-202ENST00000381565 HEATR3Q7Z4Q2 680 aa13.3□□□□□ -0.28
APOBEC3F-202ENST00000381565 PCSK9Q8NBP7 692 aaKnown RBP13.3□□□□□ -0.28
APOBEC3F-202ENST00000381565 MYLIPQ8WY64 445 aa13.3□□□□□ -0.28
APOBEC3F-202ENST00000381565 ZFP91Q96JP5 570 aaPredicted RBP13.3□□□□□ -0.28
APOBEC3F-202ENST00000381565 AP5M1Q9H0R1 490 aa13.3□□□□□ -0.28
APOBEC3F-202ENST00000381565 SPC25Q9HBM1 224 aa13.3□□□□□ -0.28
APOBEC3F-202ENST00000381565 STARD7Q9NQZ5 370 aa13.3□□□□□ -0.28
APOBEC3F-202ENST00000381565 NAP1L2Q9ULW6 460 aaPredicted RBP13.3□□□□□ -0.28
APOBEC3F-202ENST00000381565 CYP46A1Q9Y6A2 500 aa13.3□□□□□ -0.28
APOBEC3F-202ENST00000381565 CHD9Q3L8U1 2897 aa13.3□□□□□ -0.28
APOBEC3F-202ENST00000381565 STXBP3O00186 592 aa13.29□□□□□ -0.28
APOBEC3F-202ENST00000381565 EIF3JO75822 258 aaKnown RBP13.29□□□□□ -0.28
APOBEC3F-202ENST00000381565 TXNP10599 105 aaKnown RBP13.29□□□□□ -0.28
APOBEC3F-202ENST00000381565 MYCLP12524 364 aaPredicted RBP13.29□□□□□ -0.28
APOBEC3F-202ENST00000381565 PDIA3P30101 505 aaKnown RBP13.29□□□□□ -0.28
APOBEC3F-202ENST00000381565 ANAPC15P60006 121 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms