RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 CASP8Q14790 479 aa18.75■□□□□ 0.59
SGCB-201ENST00000381431 GOLGA5Q8TBA6 731 aa18.75■□□□□ 0.59
SGCB-201ENST00000381431 RIPOR2Q9Y4F9 1068 aa18.75■□□□□ 0.59
SGCB-201ENST00000381431 ADGRB3O60242 1522 aa18.75■□□□□ 0.59
SGCB-201ENST00000381431 GOLGA8KD6RF30 607 aa18.75■□□□□ 0.59
SGCB-201ENST00000381431 MYL1P05976 194 aa18.75■□□□□ 0.59
SGCB-201ENST00000381431 PLA2G4BP0C869 781 aa18.75■□□□□ 0.59
SGCB-201ENST00000381431 HSPA1LP34931 641 aa18.75■□□□□ 0.59
SGCB-201ENST00000381431 IFNAR2P48551 515 aa18.75■□□□□ 0.59
SGCB-201ENST00000381431 POMGNT1Q8WZA1 660 aa18.75■□□□□ 0.59
SGCB-201ENST00000381431 JRKLQ9Y4A0 524 aa18.75■□□□□ 0.59
SGCB-201ENST00000381431 E9PCH4 1651 aa18.75■□□□□ 0.59
SGCB-201ENST00000381431 ATP8B1O43520 1251 aa18.75■□□□□ 0.59
SGCB-201ENST00000381431 HOXA13P31271 388 aaPredicted RBP18.75■□□□□ 0.59
SGCB-201ENST00000381431 CFAP157Q5JU67 520 aa18.75■□□□□ 0.59
SGCB-201ENST00000381431 CTAGE3PQ8IX95 158 aa18.75■□□□□ 0.59
SGCB-201ENST00000381431 KCNF1Q9H3M0 494 aa18.75■□□□□ 0.59
SGCB-201ENST00000381431 THAP9Q9H5L6 903 aa18.75■□□□□ 0.59
SGCB-201ENST00000381431 ADGRL3Q9HAR2 1447 aa18.75■□□□□ 0.59
SGCB-201ENST00000381431 AFPP02771 609 aaKnown RBP18.75■□□□□ 0.59
SGCB-201ENST00000381431 SMIM5Q71RC9 77 aa18.75■□□□□ 0.59
SGCB-201ENST00000381431 BHMT2Q9H2M3 363 aa18.75■□□□□ 0.59
SGCB-201ENST00000381431 ZCCHC17Q9NP64 241 aaKnown RBP18.75■□□□□ 0.59
SGCB-201ENST00000381431 LRRIQ4A6NIV6 560 aa18.74■□□□□ 0.59
SGCB-201ENST00000381431 SFI1A8K8P3 1242 aa18.74■□□□□ 0.59
SGCB-201ENST00000381431 IQCB1Q15051 598 aa18.74■□□□□ 0.59
SGCB-201ENST00000381431 PFKFB3Q16875 520 aaPredicted RBP18.74■□□□□ 0.59
SGCB-201ENST00000381431 CCDC170Q8IYT3 715 aa18.74■□□□□ 0.59
SGCB-201ENST00000381431 CACNA2D3Q8IZS8 1091 aa18.74■□□□□ 0.59
SGCB-201ENST00000381431 ZNF579Q8NAF0 562 aaKnown RBP18.74■□□□□ 0.59
SGCB-201ENST00000381431 IRX2Q9BZI1 471 aaPredicted RBP18.74■□□□□ 0.59
SGCB-201ENST00000381431 ALDH8A1Q9H2A2 487 aaPredicted RBP18.74■□□□□ 0.59
SGCB-201ENST00000381431 PTPN22Q9Y2R2 807 aa18.74■□□□□ 0.59
SGCB-201ENST00000381431 FAM205CA6NFA0 338 aa18.74■□□□□ 0.59
SGCB-201ENST00000381431 PRPF6O94906 941 aaKnown RBP18.74■□□□□ 0.59
SGCB-201ENST00000381431 BSPRYQ5W0U4 402 aa18.74■□□□□ 0.59
SGCB-201ENST00000381431 SGMS1Q86VZ5 419 aa18.74■□□□□ 0.59
SGCB-201ENST00000381431 PAGR1Q9BTK6 254 aa18.74■□□□□ 0.59
SGCB-201ENST00000381431 QRICH2Q9H0J4 1663 aa18.74■□□□□ 0.59
SGCB-201ENST00000381431 CDC42BPBQ9Y5S2 1711 aa18.74■□□□□ 0.59
SGCB-201ENST00000381431 CCDC160A6NGH7 325 aa18.74■□□□□ 0.59
SGCB-201ENST00000381431 HNRNPDLO14979 420 aaKnown RBP18.74■□□□□ 0.59
SGCB-201ENST00000381431 TRIM28Q13263 835 aaKnown RBP18.74■□□□□ 0.59
SGCB-201ENST00000381431 CLEC4GQ6UXB4 293 aa18.74■□□□□ 0.59
SGCB-201ENST00000381431 ZNF577Q9BSK1 485 aa18.74■□□□□ 0.59
SGCB-201ENST00000381431 LAMC1P11047 1609 aa18.73■□□□□ 0.59
SGCB-201ENST00000381431 USP42Q9H9J4 1324 aaKnown RBP18.73■□□□□ 0.59
SGCB-201ENST00000381431 STK36Q9NRP7 1315 aa18.73■□□□□ 0.59
SGCB-201ENST00000381431 FAM196BA6NMK8 535 aa18.73■□□□□ 0.59
SGCB-201ENST00000381431 BMP3P12645 472 aa18.73■□□□□ 0.59
SGCB-201ENST00000381431 MTF1Q14872 753 aa18.73■□□□□ 0.59
SGCB-201ENST00000381431 CASC4Q6P4E1 433 aa18.73■□□□□ 0.59
SGCB-201ENST00000381431 CCDC89Q8N998 374 aa18.73■□□□□ 0.59
SGCB-201ENST00000381431 TRIM6Q9C030 488 aaPredicted RBP18.73■□□□□ 0.59
SGCB-201ENST00000381431 PCDHA13Q9Y5I0 950 aa18.73■□□□□ 0.59
SGCB-201ENST00000381431 BZW2Q9Y6E2 419 aaKnown RBP18.73■□□□□ 0.59
SGCB-201ENST00000381431 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.73■□□□□ 0.59
SGCB-201ENST00000381431 PDE6CP51160 858 aa18.73■□□□□ 0.59
SGCB-201ENST00000381431 GRAPQ13588 217 aa18.73■□□□□ 0.59
SGCB-201ENST00000381431 ALX1Q15699 326 aa18.73■□□□□ 0.59
SGCB-201ENST00000381431 GNPTABQ3T906 1256 aa18.73■□□□□ 0.59
SGCB-201ENST00000381431 FYB2Q5VWT5 728 aa18.73■□□□□ 0.59
SGCB-201ENST00000381431 METTL13Q8N6R0 699 aa18.73■□□□□ 0.59
SGCB-201ENST00000381431 GRAPLQ8TC17 118 aaPredicted RBP18.73■□□□□ 0.59
SGCB-201ENST00000381431 ARHGEF2Q92974 986 aaKnown RBP18.73■□□□□ 0.59
SGCB-201ENST00000381431 HOMER3Q9NSC5 361 aa18.73■□□□□ 0.59
SGCB-201ENST00000381431 PARP2Q9UGN5 583 aa18.73■□□□□ 0.59
SGCB-201ENST00000381431 NRKQ7Z2Y5 1582 aa18.73■□□□□ 0.59
SGCB-201ENST00000381431 USP17L5A8MUK1 530 aa18.73■□□□□ 0.59
SGCB-201ENST00000381431 PSMC2P35998 433 aaKnown RBP18.73■□□□□ 0.59
SGCB-201ENST00000381431 USP49Q70CQ1 688 aa18.73■□□□□ 0.59
SGCB-201ENST00000381431 METTL16Q86W50 562 aaKnown RBP18.73■□□□□ 0.59
SGCB-201ENST00000381431 STMN2Q93045 179 aa18.73■□□□□ 0.59
SGCB-201ENST00000381431 RSRC1Q96IZ7 334 aaKnown RBP18.73■□□□□ 0.59
SGCB-201ENST00000381431 PLCB1Q9NQ66 1216 aa18.73■□□□□ 0.59
SGCB-201ENST00000381431 PLTPP55058 493 aa18.72■□□□□ 0.59
SGCB-201ENST00000381431 MYL7Q01449 175 aa18.72■□□□□ 0.59
SGCB-201ENST00000381431 PPP2R5EQ16537 467 aa18.72■□□□□ 0.59
SGCB-201ENST00000381431 KAZNQ674X7 775 aa18.72■□□□□ 0.59
SGCB-201ENST00000381431 ABHD10Q9NUJ1 306 aa18.72■□□□□ 0.59
SGCB-201ENST00000381431 GCNT4Q9P109 453 aa18.72■□□□□ 0.59
SGCB-201ENST00000381431 ATP8A1Q9Y2Q0 1164 aa18.72■□□□□ 0.59
SGCB-201ENST00000381431 ANKRD65E5RJM6 399 aa18.72■□□□□ 0.59
SGCB-201ENST00000381431 DAPK3O43293 454 aa18.72■□□□□ 0.59
SGCB-201ENST00000381431 TXNRD1Q16881 649 aa18.72■□□□□ 0.59
SGCB-201ENST00000381431 IVNS1ABPQ9Y6Y0 642 aa18.72■□□□□ 0.59
SGCB-201ENST00000381431 USP17L15C9J2P7 530 aa18.72■□□□□ 0.59
SGCB-201ENST00000381431 USP17L13C9JLJ4 530 aa18.72■□□□□ 0.59
SGCB-201ENST00000381431 USP17L11C9JVI0 530 aa18.72■□□□□ 0.59
SGCB-201ENST00000381431 USP17L18D6R9N7 530 aa18.72■□□□□ 0.59
SGCB-201ENST00000381431 USP17L22D6RA61 530 aa18.72■□□□□ 0.59
SGCB-201ENST00000381431 USP17L17D6RBQ6 530 aa18.72■□□□□ 0.59
SGCB-201ENST00000381431 USP17L19D6RCP7 530 aa18.72■□□□□ 0.59
SGCB-201ENST00000381431 USP17L20D6RJB6 530 aa18.72■□□□□ 0.59
SGCB-201ENST00000381431 SLC8A3P57103 927 aa18.72■□□□□ 0.59
SGCB-201ENST00000381431 IRX3P78415 501 aaPredicted RBP18.72■□□□□ 0.59
SGCB-201ENST00000381431 USP17L24Q0WX57 530 aa18.72■□□□□ 0.59
SGCB-201ENST00000381431 USP17L6PQ6QN14 398 aa18.72■□□□□ 0.59
SGCB-201ENST00000381431 ANKFY1Q9P2R3 1169 aa18.72■□□□□ 0.59
SGCB-201ENST00000381431 STK38LQ9Y2H1 464 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms