RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 LY6KQ17RY6 165 aa18.68■□□□□ 0.58
VCX3A-201ENST00000381089 ASPRV1Q53RT3 343 aa18.68■□□□□ 0.58
VCX3A-201ENST00000381089 ARHGEF16Q5VV41 709 aa18.68■□□□□ 0.58
VCX3A-201ENST00000381089 CNKSR3Q6P9H4 555 aa18.68■□□□□ 0.58
VCX3A-201ENST00000381089 SYTL5Q8TDW5 730 aaPredicted RBP18.68■□□□□ 0.58
VCX3A-201ENST00000381089 NEDD4P46934 1319 aa18.68■□□□□ 0.58
VCX3A-201ENST00000381089 TRIP12Q14669 1992 aaPredicted RBP18.68■□□□□ 0.58
VCX3A-201ENST00000381089 EPOPA6NHQ4 379 aa18.67■□□□□ 0.58
VCX3A-201ENST00000381089 RRP1P56182 461 aaKnown RBP18.67■□□□□ 0.58
VCX3A-201ENST00000381089 WDR5P61964 334 aaKnown RBP18.67■□□□□ 0.58
VCX3A-201ENST00000381089 ARHGAP1Q07960 439 aa18.67■□□□□ 0.58
VCX3A-201ENST00000381089 GDF6Q6KF10 455 aaPredicted RBP18.67■□□□□ 0.58
VCX3A-201ENST00000381089 FBXO11Q86XK2 927 aa18.67■□□□□ 0.58
VCX3A-201ENST00000381089 ADGRF4Q8IZF3 695 aa18.67■□□□□ 0.58
VCX3A-201ENST00000381089 TAAR1Q96RJ0 339 aa18.67■□□□□ 0.58
VCX3A-201ENST00000381089 MRVI1Q9Y6F6 885 aa18.67■□□□□ 0.58
VCX3A-201ENST00000381089 ABHD14A-ACY1A0A1B0GW23 586 aa18.66■□□□□ 0.58
VCX3A-201ENST00000381089 EIF3JO75822 258 aaKnown RBP18.66■□□□□ 0.58
VCX3A-201ENST00000381089 PARP1P09874 1014 aaKnown RBP18.66■□□□□ 0.58
VCX3A-201ENST00000381089 RBL2Q08999 1139 aa18.66■□□□□ 0.58
VCX3A-201ENST00000381089 GRB10Q13322 594 aa18.66■□□□□ 0.58
VCX3A-201ENST00000381089 LAMC2Q13753 1193 aa18.66■□□□□ 0.58
VCX3A-201ENST00000381089 TET1Q8NFU7 2136 aa18.66■□□□□ 0.58
VCX3A-201ENST00000381089 EMID1Q96A84 441 aaPredicted RBP18.66■□□□□ 0.58
VCX3A-201ENST00000381089 FAM122AQ96E09 287 aa18.66■□□□□ 0.58
VCX3A-201ENST00000381089 CRBNQ96SW2 442 aa18.66■□□□□ 0.58
VCX3A-201ENST00000381089 CPVLQ9H3G5 476 aa18.66■□□□□ 0.58
VCX3A-201ENST00000381089 LMCD1Q9NZU5 365 aa18.66■□□□□ 0.58
VCX3A-201ENST00000381089 GTF2IRD1Q9UHL9 959 aa18.66■□□□□ 0.58
VCX3A-201ENST00000381089 KDM4AO75164 1064 aa18.65■□□□□ 0.58
VCX3A-201ENST00000381089 CKBP12277 381 aa18.65■□□□□ 0.58
VCX3A-201ENST00000381089 SDSP20132 328 aa18.65■□□□□ 0.58
VCX3A-201ENST00000381089 PSEN2P49810 448 aa18.65■□□□□ 0.58
VCX3A-201ENST00000381089 QRICH1Q2TAL8 776 aa18.65■□□□□ 0.58
VCX3A-201ENST00000381089 ANKS1AQ92625 1134 aa18.65■□□□□ 0.58
VCX3A-201ENST00000381089 KAT2BQ92831 832 aa18.65■□□□□ 0.58
VCX3A-201ENST00000381089 ZSCAN10Q96SZ4 725 aaPredicted RBP18.65■□□□□ 0.58
VCX3A-201ENST00000381089 RAPGEFL1Q9UHV5 662 aa18.65■□□□□ 0.58
VCX3A-201ENST00000381089 DDX41Q9UJV9 622 aaKnown RBP18.65■□□□□ 0.58
VCX3A-201ENST00000381089 KIAA1217Q5T5P2 1943 aa18.64■□□□□ 0.58
VCX3A-201ENST00000381089 HIP1O00291 1037 aa18.64■□□□□ 0.57
VCX3A-201ENST00000381089 ARHGEF15O94989 841 aa18.64■□□□□ 0.57
VCX3A-201ENST00000381089 CXCL10P02778 98 aa18.64■□□□□ 0.57
VCX3A-201ENST00000381089 EIF2AK2P19525 551 aaKnown RBP18.64■□□□□ 0.57
VCX3A-201ENST00000381089 PLA2G5P39877 138 aa18.64■□□□□ 0.57
VCX3A-201ENST00000381089 PTK7Q13308 1070 aa18.64■□□□□ 0.57
VCX3A-201ENST00000381089 IKBKEQ14164 716 aa18.64■□□□□ 0.57
VCX3A-201ENST00000381089 MFSD10Q14728 455 aa18.64■□□□□ 0.57
VCX3A-201ENST00000381089 KRT40Q6A162 431 aa18.64■□□□□ 0.57
VCX3A-201ENST00000381089 KCNV1Q6PIU1 500 aa18.64■□□□□ 0.57
VCX3A-201ENST00000381089 DHX37Q8IY37 1157 aaKnown RBP18.64■□□□□ 0.57
VCX3A-201ENST00000381089 PPTC7Q8NI37 304 aa18.64■□□□□ 0.57
VCX3A-201ENST00000381089 TBC1D5Q92609 795 aa18.64■□□□□ 0.57
VCX3A-201ENST00000381089 RAD9AQ99638 391 aa18.64■□□□□ 0.57
VCX3A-201ENST00000381089 ALG1Q9BT22 464 aa18.64■□□□□ 0.57
VCX3A-201ENST00000381089 LNPKQ9C0E8 428 aa18.64■□□□□ 0.57
VCX3A-201ENST00000381089 DIAPH3Q9NSV4 1193 aa18.64■□□□□ 0.57
VCX3A-201ENST00000381089 COL20A1Q9P218 1284 aa18.64■□□□□ 0.57
VCX3A-201ENST00000381089 HDAC6Q9UBN7 1215 aa18.64■□□□□ 0.57
VCX3A-201ENST00000381089 MYH6P13533 1939 aa18.63■□□□□ 0.57
VCX3A-201ENST00000381089 CFBP00751 764 aa18.63■□□□□ 0.57
VCX3A-201ENST00000381089 NR3C2P08235 984 aa18.63■□□□□ 0.57
VCX3A-201ENST00000381089 IMMTQ16891 758 aaKnown RBP18.63■□□□□ 0.57
VCX3A-201ENST00000381089 KIAA0753Q2KHM9 967 aa18.63■□□□□ 0.57
VCX3A-201ENST00000381089 DHX38Q92620 1227 aaKnown RBP18.63■□□□□ 0.57
VCX3A-201ENST00000381089 TGS1Q96RS0 853 aaKnown RBP18.63■□□□□ 0.57
VCX3A-201ENST00000381089 UBAC1Q9BSL1 405 aa18.63■□□□□ 0.57
VCX3A-201ENST00000381089 AMNQ9BXJ7 453 aa18.63■□□□□ 0.57
VCX3A-201ENST00000381089 KRT23Q9C075 422 aa18.63■□□□□ 0.57
VCX3A-201ENST00000381089 VAT1LQ9HCJ6 419 aa18.63■□□□□ 0.57
VCX3A-201ENST00000381089 PXMP2Q9NR77 195 aa18.63■□□□□ 0.57
VCX3A-201ENST00000381089 CTNNA3Q9UI47 895 aa18.63■□□□□ 0.57
VCX3A-201ENST00000381089 B4E1Z4 1266 aa18.62■□□□□ 0.57
VCX3A-201ENST00000381089 GJB5O95377 273 aa18.62■□□□□ 0.57
VCX3A-201ENST00000381089 F2P00734 622 aa18.62■□□□□ 0.57
VCX3A-201ENST00000381089 DEFB103AP81534 67 aa18.62■□□□□ 0.57
VCX3A-201ENST00000381089 CWC27Q6UX04 472 aaKnown RBP18.62■□□□□ 0.57
VCX3A-201ENST00000381089 CTAGE1Q96RT6 745 aa18.62■□□□□ 0.57
VCX3A-201ENST00000381089 CNNM2Q9H8M5 875 aa18.62■□□□□ 0.57
VCX3A-201ENST00000381089 MAP3K20Q9NYL2 800 aaKnown RBP18.62■□□□□ 0.57
VCX3A-201ENST00000381089 HCN4Q9Y3Q4 1203 aa18.62■□□□□ 0.57
VCX3A-201ENST00000381089 EMSYQ7Z589 1322 aa18.62■□□□□ 0.57
VCX3A-201ENST00000381089 LAMA4Q16363 1823 aa18.62■□□□□ 0.57
VCX3A-201ENST00000381089 LCHNA4D1U4 455 aa18.61■□□□□ 0.57
VCX3A-201ENST00000381089 LPXNO60711 386 aa18.61■□□□□ 0.57
VCX3A-201ENST00000381089 NBNO60934 754 aa18.61■□□□□ 0.57
VCX3A-201ENST00000381089 ZNF286BP0CG31 522 aa18.61■□□□□ 0.57
VCX3A-201ENST00000381089 TRAF1Q13077 416 aa18.61■□□□□ 0.57
VCX3A-201ENST00000381089 AAMPQ13685 434 aa18.61■□□□□ 0.57
VCX3A-201ENST00000381089 SAMD3Q8N6K7 520 aa18.61■□□□□ 0.57
VCX3A-201ENST00000381089 ENAHQ8N8S7 591 aaPredicted RBP18.61■□□□□ 0.57
VCX3A-201ENST00000381089 GDPD5Q8WTR4 605 aa18.61■□□□□ 0.57
VCX3A-201ENST00000381089 JMJD4Q9H9V9 463 aa18.61■□□□□ 0.57
VCX3A-201ENST00000381089 MTUS1Q9ULD2 1270 aa18.61■□□□□ 0.57
VCX3A-201ENST00000381089 COL4A4P53420 1690 aaPredicted RBP18.6■□□□□ 0.57
VCX3A-201ENST00000381089 PPFIA4O75335 1185 aa18.6■□□□□ 0.57
VCX3A-201ENST00000381089 MYCLP12524 364 aaPredicted RBP18.6■□□□□ 0.57
VCX3A-201ENST00000381089 HSD17B4P51659 736 aa18.6■□□□□ 0.57
VCX3A-201ENST00000381089 ERVK-21P61565 698 aa18.6■□□□□ 0.57
VCX3A-201ENST00000381089 GPNMBQ14956 572 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms