RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 KRT19P08727 400 aa13.48□□□□□ -0.25
GABPB1-203ENST00000380877 PPP4CP60510 307 aa13.48□□□□□ -0.25
GABPB1-203ENST00000380877 EXOC3L4Q17RC7 722 aa13.48□□□□□ -0.25
GABPB1-203ENST00000380877 LIN9Q5TKA1 542 aa13.48□□□□□ -0.25
GABPB1-203ENST00000380877 STYK1Q6J9G0 422 aa13.48□□□□□ -0.25
GABPB1-203ENST00000380877 C3orf67Q6ZVT6 689 aa13.48□□□□□ -0.25
GABPB1-203ENST00000380877 C16orf86Q6ZW13 317 aa13.48□□□□□ -0.25
GABPB1-203ENST00000380877 ARMC9Q7Z3E5 817 aa13.48□□□□□ -0.25
GABPB1-203ENST00000380877 CCDC155Q8N6L0 562 aa13.48□□□□□ -0.25
GABPB1-203ENST00000380877 EMILIN3Q9NT22 766 aa13.48□□□□□ -0.25
GABPB1-203ENST00000380877 N4BP1O75113 896 aaKnown RBP13.48□□□□□ -0.25
GABPB1-203ENST00000380877 GOLGA8FQ08AF8 430 aa13.48□□□□□ -0.25
GABPB1-203ENST00000380877 GOLGA8DPQ0D2H9 430 aa13.48□□□□□ -0.25
GABPB1-203ENST00000380877 MAN2A1Q16706 1144 aa13.48□□□□□ -0.25
GABPB1-203ENST00000380877 SEPT14Q6ZU15 432 aa13.48□□□□□ -0.25
GABPB1-203ENST00000380877 NAP1L3Q99457 506 aaPredicted RBP13.48□□□□□ -0.25
GABPB1-203ENST00000380877 ANAPC4Q9UJX5 808 aa13.48□□□□□ -0.25
GABPB1-203ENST00000380877 ZBTB12Q9Y330 459 aaPredicted RBP13.48□□□□□ -0.25
GABPB1-203ENST00000380877 LMAN1P49257 510 aa13.48□□□□□ -0.25
GABPB1-203ENST00000380877 ELF2Q15723 593 aa13.48□□□□□ -0.25
GABPB1-203ENST00000380877 SLC7A3Q8WY07 619 aa13.48□□□□□ -0.25
GABPB1-203ENST00000380877 ZFP91Q96JP5 570 aaPredicted RBP13.48□□□□□ -0.25
GABPB1-203ENST00000380877 HAUS4Q9H6D7 363 aa13.48□□□□□ -0.25
GABPB1-203ENST00000380877 PSDA5PKW4 1024 aaPredicted RBP13.47□□□□□ -0.25
GABPB1-203ENST00000380877 HNRNPDLO14979 420 aaKnown RBP13.47□□□□□ -0.25
GABPB1-203ENST00000380877 DLATP10515 647 aaKnown RBP13.47□□□□□ -0.25
GABPB1-203ENST00000380877 ATP2C1P98194 919 aaPredicted RBP13.47□□□□□ -0.25
GABPB1-203ENST00000380877 PSMD2Q13200 908 aa13.47□□□□□ -0.25
GABPB1-203ENST00000380877 FAM160B1Q5W0V3 765 aa13.47□□□□□ -0.25
GABPB1-203ENST00000380877 TTBK2Q6IQ55 1244 aa13.47□□□□□ -0.25
GABPB1-203ENST00000380877 C8orf74Q6P047 294 aa13.47□□□□□ -0.25
GABPB1-203ENST00000380877 RNF207Q6ZRF8 634 aa13.47□□□□□ -0.25
GABPB1-203ENST00000380877 DHX37Q8IY37 1157 aaKnown RBP13.47□□□□□ -0.25
GABPB1-203ENST00000380877 U2AF1L4Q8WU68 220 aaKnown RBP13.47□□□□□ -0.25
GABPB1-203ENST00000380877 CEP170P1Q96L14 293 aa13.47□□□□□ -0.25
GABPB1-203ENST00000380877 FEM1BQ9UK73 627 aa13.47□□□□□ -0.25
GABPB1-203ENST00000380877 HPS5Q9UPZ3 1129 aa13.47□□□□□ -0.25
GABPB1-203ENST00000380877 KIF4AO95239 1232 aa13.47□□□□□ -0.25
GABPB1-203ENST00000380877 ZNF543Q08ER8 600 aa13.47□□□□□ -0.25
GABPB1-203ENST00000380877 POMGNT1Q8WZA1 660 aa13.47□□□□□ -0.25
GABPB1-203ENST00000380877 FAM205CA6NFA0 338 aa13.47□□□□□ -0.25
GABPB1-203ENST00000380877 CEP104O60308 925 aa13.47□□□□□ -0.25
GABPB1-203ENST00000380877 OSBPP22059 807 aa13.47□□□□□ -0.25
GABPB1-203ENST00000380877 CCND2P30279 289 aa13.47□□□□□ -0.25
GABPB1-203ENST00000380877 POTEDQ86YR6 584 aa13.47□□□□□ -0.25
GABPB1-203ENST00000380877 RIOK1Q9BRS2 568 aaKnown RBP13.47□□□□□ -0.25
GABPB1-203ENST00000380877 PARVGQ9HBI0 331 aa13.47□□□□□ -0.25
GABPB1-203ENST00000380877 POLLQ9UGP5 575 aa13.47□□□□□ -0.25
GABPB1-203ENST00000380877 ENTPD3O75355 529 aa13.47□□□□□ -0.25
GABPB1-203ENST00000380877 ORC2Q13416 577 aaPredicted RBP13.47□□□□□ -0.25
GABPB1-203ENST00000380877 CTTNQ14247 550 aaKnown RBP13.47□□□□□ -0.25
GABPB1-203ENST00000380877 RPS6KA1Q15418 735 aa13.47□□□□□ -0.25
GABPB1-203ENST00000380877 EZH2Q15910 746 aaKnown RBP13.47□□□□□ -0.25
GABPB1-203ENST00000380877 VSTM4Q8IW00 320 aa13.47□□□□□ -0.25
GABPB1-203ENST00000380877 ZBTB9Q96C00 473 aa13.47□□□□□ -0.25
GABPB1-203ENST00000380877 ZRSR2Q15696 482 aaKnown RBP13.46□□□□□ -0.25
GABPB1-203ENST00000380877 PEX26Q7Z412 305 aa13.46□□□□□ -0.25
GABPB1-203ENST00000380877 CCDC26Q8TAB7 109 aa13.46□□□□□ -0.25
GABPB1-203ENST00000380877 DDX12PQ92771 950 aa13.46□□□□□ -0.25
GABPB1-203ENST00000380877 PHF20Q9BVI0 1012 aa13.46□□□□□ -0.25
GABPB1-203ENST00000380877 PP2D1A8MPX8 630 aa13.46□□□□□ -0.25
GABPB1-203ENST00000380877 TDP2O95551 362 aa13.46□□□□□ -0.25
GABPB1-203ENST00000380877 RBL2Q08999 1139 aa13.46□□□□□ -0.25
GABPB1-203ENST00000380877 PPP1R7Q15435 360 aa13.46□□□□□ -0.25
GABPB1-203ENST00000380877 DPP9Q86TI2 863 aa13.46□□□□□ -0.25
GABPB1-203ENST00000380877 FAM186BQ8IYM0 893 aa13.46□□□□□ -0.25
GABPB1-203ENST00000380877 PPM1KQ8N3J5 372 aa13.46□□□□□ -0.25
GABPB1-203ENST00000380877 UBL4BQ8N7F7 174 aa13.46□□□□□ -0.25
GABPB1-203ENST00000380877 PRPF38AQ8NAV1 312 aaKnown RBP13.46□□□□□ -0.25
GABPB1-203ENST00000380877 RAVER2Q9HCJ3 691 aaKnown RBP13.46□□□□□ -0.25
GABPB1-203ENST00000380877 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.46□□□□□ -0.25
GABPB1-203ENST00000380877 CLIC2O15247 247 aa13.46□□□□□ -0.26
GABPB1-203ENST00000380877 OPA1O60313 960 aa13.46□□□□□ -0.26
GABPB1-203ENST00000380877 DDIT3P35638 169 aa13.46□□□□□ -0.26
GABPB1-203ENST00000380877 RETREG2Q8NC44 543 aa13.46□□□□□ -0.26
GABPB1-203ENST00000380877 TRIM58Q8NG06 486 aa13.46□□□□□ -0.26
GABPB1-203ENST00000380877 RMDN3Q96TC7 470 aa13.46□□□□□ -0.26
GABPB1-203ENST00000380877 FAM184BQ9ULE4 1060 aa13.46□□□□□ -0.26
GABPB1-203ENST00000380877 GOLGA6L7A0A1B0GV03 622 aa13.46□□□□□ -0.26
GABPB1-203ENST00000380877 CALCOCO2Q13137 446 aa13.46□□□□□ -0.26
GABPB1-203ENST00000380877 RASA3Q14644 834 aa13.46□□□□□ -0.26
GABPB1-203ENST00000380877 EEPD1Q7L9B9 569 aa13.46□□□□□ -0.26
GABPB1-203ENST00000380877 KIAA1524Q8TCG1 905 aa13.46□□□□□ -0.26
GABPB1-203ENST00000380877 FAM20AQ96MK3 541 aa13.46□□□□□ -0.26
GABPB1-203ENST00000380877 THAP9Q9H5L6 903 aa13.46□□□□□ -0.26
GABPB1-203ENST00000380877 TSKSQ9UJT2 592 aa13.46□□□□□ -0.26
GABPB1-203ENST00000380877 SAR1BQ9Y6B6 198 aa13.46□□□□□ -0.26
GABPB1-203ENST00000380877 FAM170AA1A519 330 aa13.45□□□□□ -0.26
GABPB1-203ENST00000380877 ABCB4P21439 1286 aa13.45□□□□□ -0.26
GABPB1-203ENST00000380877 GTF2F1P35269 517 aaKnown RBP eCLIP13.45□□□□□ -0.26
GABPB1-203ENST00000380877 PSMC2P35998 433 aaKnown RBP13.45□□□□□ -0.26
GABPB1-203ENST00000380877 TERF1P54274 439 aa13.45□□□□□ -0.26
GABPB1-203ENST00000380877 MAP2K1Q02750 393 aaPredicted RBP13.45□□□□□ -0.26
GABPB1-203ENST00000380877 SARM1Q6SZW1 724 aa13.45□□□□□ -0.26
GABPB1-203ENST00000380877 UNC13DQ70J99 1090 aa13.45□□□□□ -0.26
GABPB1-203ENST00000380877 IKBKGQ9Y6K9 419 aa13.45□□□□□ -0.26
GABPB1-203ENST00000380877 ATP2A1O14983 1001 aa13.45□□□□□ -0.26
GABPB1-203ENST00000380877 RGL2O15211 777 aa13.45□□□□□ -0.26
GABPB1-203ENST00000380877 TROAPQ12815 778 aa13.45□□□□□ -0.26
GABPB1-203ENST00000380877 R3HDM1Q15032 1099 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms