RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 ZBED2Q9BTP6 218 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 TMEM106CQ9BVX2 250 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 TRPV6Q9H1D0 765 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 FRMPD2Q68DX3 1309 aaPredicted RBP7.81□□□□□ -1.16
CCDC171-201ENST00000380701 PASKQ96RG2 1323 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 H7C1W4 665 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 CYP2E1P05181 493 aaPredicted RBP7.81□□□□□ -1.16
CCDC171-201ENST00000380701 TECP42680 631 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 ZNF75DP51815 510 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 COG7P83436 770 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 FKBP3Q00688 224 aaKnown RBP7.81□□□□□ -1.16
CCDC171-201ENST00000380701 ARHGAP44Q17R89 818 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 PHLDB2Q86SQ0 1253 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 KRT12Q99456 494 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 NUF2Q9BZD4 464 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 SERTAD1Q9UHV2 236 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 SPATA31E1Q6ZUB1 1445 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 TARBP1Q13395 1621 aaKnown RBP7.81□□□□□ -1.16
CCDC171-201ENST00000380701 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.81□□□□□ -1.16
CCDC171-201ENST00000380701 RGS12O14924 1447 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 RPN1P04843 607 aaKnown RBP7.81□□□□□ -1.16
CCDC171-201ENST00000380701 KRT15P19012 456 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 CA4P22748 312 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 BFSP1Q12934 665 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 E2F5Q15329 346 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 DENND2CQ68D51 928 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 SIX6OS1Q8N1H7 587 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 PPANQ9NQ55 473 aaKnown RBP7.81□□□□□ -1.16
CCDC171-201ENST00000380701 CLRN2A0PK11 232 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 SPDYE16A6NNV3 312 aaPredicted RBP7.8□□□□□ -1.16
CCDC171-201ENST00000380701 MAP3K7O43318 606 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 PPP2R5DQ14738 602 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 VPS72Q15906 364 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 LONRF2Q1L5Z9 754 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 SPDYE2Q495Y8 402 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 DDX17Q92841 729 aaKnown RBP7.8□□□□□ -1.16
CCDC171-201ENST00000380701 FAM20AQ96MK3 541 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 CRAMP1Q96RY5 1269 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 TIPINQ9BVW5 301 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 SPZ1Q9BXG8 430 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 RPF1Q9H9Y2 349 aaKnown RBP7.8□□□□□ -1.16
CCDC171-201ENST00000380701 GCC2Q8IWJ2 1684 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 GTF2F1P35269 517 aaKnown RBP eCLIP7.8□□□□□ -1.16
CCDC171-201ENST00000380701 ANKRD20A3Q5VUR7 823 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 RNF207Q6ZRF8 634 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 KCTD17Q8N5Z5 321 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 MICAL1Q8TDZ2 1067 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 NLRP7Q8WX94 980 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 PIGBQ92521 554 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 HVCN1Q96D96 273 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 GJD4Q96KN9 370 aaPredicted RBP7.8□□□□□ -1.16
CCDC171-201ENST00000380701 MYL10Q9BUA6 226 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 POLR3EQ9NVU0 708 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 ZNF335Q9H4Z2 1342 aaPredicted RBP7.8□□□□□ -1.16
CCDC171-201ENST00000380701 CRB1P82279 1406 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 SART1O43290 800 aaKnown RBP7.8□□□□□ -1.16
CCDC171-201ENST00000380701 PFKFB1P16118 471 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 RPS12P25398 132 aaKnown RBP7.8□□□□□ -1.16
CCDC171-201ENST00000380701 ZNF445P59923 1031 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 UBXN2AP68543 259 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 PDXDC2PQ6P474 469 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 APOA5Q6Q788 366 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 SYT10Q6XYQ8 523 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 CCDC24Q8N4L8 307 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 JRKLQ9Y4A0 524 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 ECM2O94769 699 aaPredicted RBP7.8□□□□□ -1.16
CCDC171-201ENST00000380701 BRD1O95696 1058 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 CLCN1P35523 988 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 ATP11AP98196 1134 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 TRIM28Q13263 835 aaKnown RBP7.8□□□□□ -1.16
CCDC171-201ENST00000380701 SPATS2Q86XZ4 545 aaKnown RBP7.8□□□□□ -1.16
CCDC171-201ENST00000380701 PPM1KQ8N3J5 372 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 SDR42E1Q8WUS8 393 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 DBNDD1Q9H9R9 158 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 PARVGQ9HBI0 331 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 SCINQ9Y6U3 715 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 COL15A1P39059 1388 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 ABCC3O15438 1527 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 STXBP3O00186 592 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 AFPP02771 609 aaKnown RBP7.8□□□□□ -1.16
CCDC171-201ENST00000380701 RECQLP46063 649 aaPredicted RBP7.8□□□□□ -1.16
CCDC171-201ENST00000380701 MNAT1P51948 309 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 SLC39A14Q15043 492 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 LRRC24Q50LG9 513 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 FAM186BQ8IYM0 893 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 RPUSD2Q8IZ73 545 aaKnown RBP7.8□□□□□ -1.16
CCDC171-201ENST00000380701 DHX38Q92620 1227 aaKnown RBP7.8□□□□□ -1.16
CCDC171-201ENST00000380701 BAG5Q9UL15 447 aa7.8□□□□□ -1.16
CCDC171-201ENST00000380701 USP31Q70CQ4 1352 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 C19orf81C9J6K1 198 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 CASQ2O14958 399 aaPredicted RBP7.79□□□□□ -1.16
CCDC171-201ENST00000380701 ABL1P00519 1130 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 DDX5P17844 614 aaKnown RBP7.79□□□□□ -1.16
CCDC171-201ENST00000380701 SCYL2Q6P3W7 929 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 TADA2BQ86TJ2 420 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 POTEDQ86YR6 584 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 FNBP4Q8N3X1 1017 aaPredicted RBP7.79□□□□□ -1.16
CCDC171-201ENST00000380701 DDX50Q9BQ39 737 aaKnown RBP7.79□□□□□ -1.16
CCDC171-201ENST00000380701 VPS37BQ9H9H4 285 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 SEL1LQ9UBV2 794 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms