RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 TROAPQ12815 778 aa5.43□□□□□ -1.54
C9orf72-203ENST00000380003 WTAPQ15007 396 aa5.43□□□□□ -1.54
C9orf72-203ENST00000380003 TMEM240Q5SV17 173 aa5.43□□□□□ -1.54
C9orf72-203ENST00000380003 RASEFQ8IZ41 740 aa5.43□□□□□ -1.54
C9orf72-203ENST00000380003 ALDH8A1Q9H2A2 487 aaPredicted RBP5.43□□□□□ -1.54
C9orf72-203ENST00000380003 A0A0U1RQG5 324 aaPredicted RBP5.42□□□□□ -1.54
C9orf72-203ENST00000380003 UBE2SQ16763 222 aa5.42□□□□□ -1.54
C9orf72-203ENST00000380003 GPATCH4Q5T3I0 446 aaKnown RBP5.42□□□□□ -1.54
C9orf72-203ENST00000380003 MFSD5Q6N075 450 aa5.42□□□□□ -1.54
C9orf72-203ENST00000380003 ZNF467Q7Z7K2 595 aaPredicted RBP5.42□□□□□ -1.54
C9orf72-203ENST00000380003 KRT23Q9C075 422 aa5.42□□□□□ -1.54
C9orf72-203ENST00000380003 ADD3Q9UEY8 706 aaKnown RBP5.42□□□□□ -1.54
C9orf72-203ENST00000380003 NOD1Q9Y239 953 aa5.42□□□□□ -1.54
C9orf72-203ENST00000380003 MRVI1Q9Y6F6 885 aa5.42□□□□□ -1.54
C9orf72-203ENST00000380003 TRIP12Q14669 1992 aaPredicted RBP5.42□□□□□ -1.54
C9orf72-203ENST00000380003 PRC1O43663 620 aa5.42□□□□□ -1.54
C9orf72-203ENST00000380003 NR3C2P08235 984 aa5.42□□□□□ -1.54
C9orf72-203ENST00000380003 COPB2P35606 906 aa5.42□□□□□ -1.54
C9orf72-203ENST00000380003 IQSEC1Q6DN90 963 aa5.42□□□□□ -1.54
C9orf72-203ENST00000380003 GDF6Q6KF10 455 aaPredicted RBP5.42□□□□□ -1.54
C9orf72-203ENST00000380003 MAMSTRQ6ZN01 415 aa5.42□□□□□ -1.54
C9orf72-203ENST00000380003 CYP2W1Q8TAV3 490 aa5.42□□□□□ -1.54
C9orf72-203ENST00000380003 IGDCC4Q8TDY8 1250 aa5.42□□□□□ -1.54
C9orf72-203ENST00000380003 MAP4K1Q92918 833 aa5.42□□□□□ -1.54
C9orf72-203ENST00000380003 ZNF576Q9H609 170 aa5.42□□□□□ -1.54
C9orf72-203ENST00000380003 CTNNA3Q9UI47 895 aa5.42□□□□□ -1.54
C9orf72-203ENST00000380003 YBX2Q9Y2T7 364 aaKnown RBP5.42□□□□□ -1.54
C9orf72-203ENST00000380003 SCN5AQ14524 2016 aa5.42□□□□□ -1.54
C9orf72-203ENST00000380003 ABCB11O95342 1321 aa5.42□□□□□ -1.54
C9orf72-203ENST00000380003 ERICH2A1L162 156 aa5.42□□□□□ -1.54
C9orf72-203ENST00000380003 SLC27A2O14975 620 aa5.42□□□□□ -1.54
C9orf72-203ENST00000380003 KIAA0355O15063 1070 aa5.42□□□□□ -1.54
C9orf72-203ENST00000380003 CD4P01730 458 aa5.42□□□□□ -1.54
C9orf72-203ENST00000380003 CTSHP09668 335 aa5.42□□□□□ -1.54
C9orf72-203ENST00000380003 FOSL2P15408 326 aa5.42□□□□□ -1.54
C9orf72-203ENST00000380003 MARK3P27448 753 aa5.42□□□□□ -1.54
C9orf72-203ENST00000380003 TFF2Q03403 129 aa5.42□□□□□ -1.54
C9orf72-203ENST00000380003 ADGRE1Q14246 886 aa5.42□□□□□ -1.54
C9orf72-203ENST00000380003 TCTN1Q2MV58 587 aa5.42□□□□□ -1.54
C9orf72-203ENST00000380003 DHX37Q8IY37 1157 aaKnown RBP5.42□□□□□ -1.54
C9orf72-203ENST00000380003 SRBD1Q8N5C6 995 aaKnown RBP5.42□□□□□ -1.54
C9orf72-203ENST00000380003 NCOA7Q8NI08 942 aa5.42□□□□□ -1.54
C9orf72-203ENST00000380003 CTAGE1Q96RT6 745 aa5.42□□□□□ -1.54
C9orf72-203ENST00000380003 AMNQ9BXJ7 453 aa5.42□□□□□ -1.54
C9orf72-203ENST00000380003 FTOQ9C0B1 505 aaKnown RBP eCLIP5.42□□□□□ -1.54
C9orf72-203ENST00000380003 LSG1Q9H089 658 aaKnown RBP5.42□□□□□ -1.54
C9orf72-203ENST00000380003 LY9Q9HBG7 655 aa5.42□□□□□ -1.54
C9orf72-203ENST00000380003 PXMP2Q9NR77 195 aa5.42□□□□□ -1.54
C9orf72-203ENST00000380003 HDAC6Q9UBN7 1215 aa5.42□□□□□ -1.54
C9orf72-203ENST00000380003 ELP1O95163 1332 aa5.41□□□□□ -1.54
C9orf72-203ENST00000380003 LCHNA4D1U4 455 aa5.41□□□□□ -1.54
C9orf72-203ENST00000380003 PALM3A6NDB9 673 aaPredicted RBP5.41□□□□□ -1.54
C9orf72-203ENST00000380003 ZBTB5O15062 677 aa5.41□□□□□ -1.54
C9orf72-203ENST00000380003 PLA2G6O60733 806 aa5.41□□□□□ -1.54
C9orf72-203ENST00000380003 PTGISQ16647 500 aa5.41□□□□□ -1.54
C9orf72-203ENST00000380003 CREB3L3Q68CJ9 461 aa5.41□□□□□ -1.54
C9orf72-203ENST00000380003 CYFIP1Q7L576 1253 aa5.41□□□□□ -1.54
C9orf72-203ENST00000380003 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.41□□□□□ -1.54
C9orf72-203ENST00000380003 ZNF579Q8NAF0 562 aaKnown RBP5.41□□□□□ -1.54
C9orf72-203ENST00000380003 MAFAQ8NHW3 353 aaPredicted RBP5.41□□□□□ -1.54
C9orf72-203ENST00000380003 NSUN6Q8TEA1 469 aaKnown RBP5.41□□□□□ -1.54
C9orf72-203ENST00000380003 SCFD2Q8WU76 684 aa5.41□□□□□ -1.54
C9orf72-203ENST00000380003 KAT2BQ92831 832 aa5.41□□□□□ -1.54
C9orf72-203ENST00000380003 NOC4LQ9BVI4 516 aaKnown RBP5.41□□□□□ -1.54
C9orf72-203ENST00000380003 COL25A1Q9BXS0 654 aaPredicted RBP5.41□□□□□ -1.54
C9orf72-203ENST00000380003 NKX2-4Q9H2Z4 354 aa5.41□□□□□ -1.54
C9orf72-203ENST00000380003 ZNF236Q9UL36 1845 aa5.41□□□□□ -1.54
C9orf72-203ENST00000380003 A0A1W2PPC1 479 aa5.41□□□□□ -1.54
C9orf72-203ENST00000380003 HIP1O00291 1037 aa5.41□□□□□ -1.54
C9orf72-203ENST00000380003 ATP9AO75110 1047 aa5.41□□□□□ -1.54
C9orf72-203ENST00000380003 GGPS1O95749 300 aa5.41□□□□□ -1.54
C9orf72-203ENST00000380003 CA3P07451 260 aa5.41□□□□□ -1.54
C9orf72-203ENST00000380003 MRPS9P82933 396 aaKnown RBP5.41□□□□□ -1.54
C9orf72-203ENST00000380003 ARHGAP1Q07960 439 aa5.41□□□□□ -1.54
C9orf72-203ENST00000380003 PGM5Q15124 567 aa5.41□□□□□ -1.54
C9orf72-203ENST00000380003 STXBP2Q15833 593 aa5.41□□□□□ -1.54
C9orf72-203ENST00000380003 KIAA0753Q2KHM9 967 aa5.41□□□□□ -1.54
C9orf72-203ENST00000380003 ASPRV1Q53RT3 343 aa5.41□□□□□ -1.54
C9orf72-203ENST00000380003 TYW1BQ6NUM6 668 aa5.41□□□□□ -1.54
C9orf72-203ENST00000380003 CCDC62Q6P9F0 684 aa5.41□□□□□ -1.54
C9orf72-203ENST00000380003 MB21D2Q8IYB1 491 aaPredicted RBP5.41□□□□□ -1.54
C9orf72-203ENST00000380003 ZNF654Q8IZM8 581 aa5.41□□□□□ -1.54
C9orf72-203ENST00000380003 MSL3Q8N5Y2 521 aaKnown RBP5.41□□□□□ -1.54
C9orf72-203ENST00000380003 TIFAQ96CG3 184 aa5.41□□□□□ -1.54
C9orf72-203ENST00000380003 SPATA33Q96N06 139 aa5.41□□□□□ -1.54
C9orf72-203ENST00000380003 TOX2Q96NM4 488 aa5.41□□□□□ -1.54
C9orf72-203ENST00000380003 NECAB3Q96P71 396 aaPredicted RBP5.41□□□□□ -1.54
C9orf72-203ENST00000380003 ESYT1Q9BSJ8 1104 aa5.41□□□□□ -1.54
C9orf72-203ENST00000380003 TSEN34Q9BSV6 310 aaKnown RBP5.41□□□□□ -1.54
C9orf72-203ENST00000380003 UPF3AQ9H1J1 476 aaKnown RBP5.41□□□□□ -1.54
C9orf72-203ENST00000380003 VTA1Q9NP79 307 aa5.41□□□□□ -1.54
C9orf72-203ENST00000380003 DDX41Q9UJV9 622 aaKnown RBP5.41□□□□□ -1.54
C9orf72-203ENST00000380003 BRPF3Q9ULD4 1205 aa5.41□□□□□ -1.54
C9orf72-203ENST00000380003 LTBP2Q14767 1821 aa5.41□□□□□ -1.54
C9orf72-203ENST00000380003 MYH6P13533 1939 aa5.41□□□□□ -1.54
C9orf72-203ENST00000380003 ZMYM6O95789 1325 aa5.41□□□□□ -1.54
C9orf72-203ENST00000380003 EPOPA6NHQ4 379 aa5.4□□□□□ -1.54
C9orf72-203ENST00000380003 FGBP02675 491 aa5.4□□□□□ -1.54
C9orf72-203ENST00000380003 MMP3P08254 477 aa5.4□□□□□ -1.54
C9orf72-203ENST00000380003 FDX1P10109 184 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms